Detailed information NTG0587651

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: KW112_RS07070
• Genome accession: NZ_CP079096
• Coordinates: 1554297..1555358 (-)
• Length: 353 a.a.
• NCBI ID: WP_017365267.1
• Uniprot ID: -
• Organism: Methylococcus capsulatus strain BH
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1549297..1560358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KW112_RS07045 (KW112_07045)	aroK	1549738..1550277 (-)	540	WP_010959691.1	shikimate kinase AroK	-
KW112_RS07050 (KW112_07050)	pilQ	1550339..1552399 (-)	2061	WP_249385481.1	type IV pilus secretin PilQ	-
KW112_RS07055 (KW112_07055)	-	1552515..1553057 (-)	543	WP_010959689.1	pilus assembly protein PilP	-
KW112_RS07060 (KW112_07060)	-	1553057..1553695 (-)	639	WP_010959688.1	type 4a pilus biogenesis protein PilO	-
KW112_RS07065 (KW112_07065)	-	1553692..1554297 (-)	606	WP_017365266.1	PilN domain-containing protein	-
KW112_RS07070 (KW112_07070)	pilM	1554297..1555358 (-)	1062	WP_017365267.1	pilus assembly protein PilM	Machinery gene
KW112_RS07075 (KW112_07075)	-	1555680..1558127 (+)	2448	WP_249385139.1	penicillin-binding protein 1A	-
KW112_RS07080 (KW112_07080)	-	1558143..1558754 (+)	612	WP_249385140.1	hypothetical protein	-
KW112_RS07085 (KW112_07085)	rpmE	1558790..1558993 (-)	204	WP_010959683.1	50S ribosomal protein L31	-
KW112_RS07090 (KW112_07090)	-	1559108..1559881 (+)	774	WP_010959682.1	exodeoxyribonuclease III	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 38425.92 Da
• Isoelectric Point: 4.9350

>NTDB_id=587651 KW112_RS07070 WP_017365267.1 1554297..1555358(-) (pilM) [Methylococcus capsulatus strain BH]
MWGLGRKKPLLLGIDISAAAVKLLELSRKNGGYQVESYGVVPLPRNTVVDNTLAEPDNVSAAVRAVVKQSGTALRHAVVA
VPGSVVITKRIALPANLEGDELEAQIELEADQYIPHAREEVSLDFEVLGKNPKNPDLLDVLLVATRRENVEDRVSVLENA
GLGVEIVDVESYAIERAFELVRDQLPPLLRDRAVAVADVGAMATTLNVIHGGSIIYTREQGFGGMQLTDEIQRRYGLTYE
EAGLAKKEGSLPGNYAEEVLEPFKHALVQQISRSFQFYLSSTAQRGFDAVVLAGGCAMIPGIDRYVEAALQVPTVIANPF
RHMSFSGRVRQERLSYDSSALMLACGLALRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=587651 KW112_RS07070 WP_017365267.1 1554297..1555358(-) (pilM) [Methylococcus capsulatus strain BH]
ATGTGGGGCCTAGGAAGGAAGAAACCGCTCCTGCTGGGGATCGATATCAGCGCGGCGGCGGTCAAGCTGCTCGAGCTGAG
CAGAAAGAACGGCGGCTACCAGGTGGAAAGCTATGGCGTTGTGCCTTTGCCCCGCAACACGGTGGTCGACAACACCCTTG
CCGAGCCGGACAACGTGTCGGCGGCGGTCCGGGCCGTGGTCAAACAGTCGGGGACCGCGCTCAGGCACGCGGTGGTCGCG
GTACCCGGCTCGGTGGTCATCACCAAGCGCATCGCCCTACCCGCCAACCTGGAGGGCGACGAACTCGAGGCGCAGATCGA
ACTGGAGGCGGACCAGTACATTCCTCACGCCAGGGAGGAAGTCAGCCTGGATTTCGAGGTACTGGGGAAGAATCCGAAGA
ATCCCGATCTGCTGGATGTGCTGCTGGTGGCGACCCGCCGGGAGAACGTGGAAGACCGGGTCTCGGTACTGGAAAACGCC
GGACTCGGCGTCGAGATCGTCGATGTCGAGTCCTATGCCATCGAACGCGCCTTCGAACTTGTCCGGGATCAGCTTCCACC
GCTCCTCCGCGACCGGGCGGTTGCCGTAGCCGATGTGGGCGCCATGGCCACGACGCTCAACGTCATCCATGGCGGTTCCA
TCATCTACACGCGGGAACAGGGTTTCGGCGGCATGCAGCTCACCGACGAGATCCAGCGGCGCTACGGTTTGACCTACGAG
GAAGCGGGGCTGGCGAAGAAGGAGGGGAGCCTTCCCGGCAACTATGCCGAAGAGGTGCTGGAGCCGTTCAAGCATGCCTT
GGTTCAGCAGATCAGCCGATCGTTCCAGTTCTATCTGTCGTCCACTGCGCAGCGTGGTTTCGATGCGGTGGTGCTGGCCG
GCGGCTGCGCCATGATTCCGGGGATAGACCGTTACGTCGAGGCGGCGTTGCAGGTTCCCACCGTGATTGCCAATCCCTTC
CGTCACATGAGTTTTTCGGGAAGGGTGCGGCAGGAGCGCCTGAGTTACGATTCATCCGCCCTGATGCTGGCATGCGGCCT
GGCACTGCGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.603	97.167	0.501
comM	Acinetobacter nosocomialis M2	51.02	97.167	0.496
comM	Acinetobacter baylyi ADP1	49.138	98.584	0.484
pilM	Legionella pneumophila strain ERS1305867	42.733	97.45	0.416