Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | KQ254_RS17440 | Genome accession | NZ_CP076807 |
| Coordinates | 3614613..3615650 (+) | Length | 345 a.a. |
| NCBI ID | WP_000355489.1 | Uniprot ID | A0A009PTR1 |
| Organism | Acinetobacter baumannii strain UC20804 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| IS/Tn | 3615807..3616817 | 3614613..3615650 | flank | 157 |
Gene organization within MGE regions
Location: 3614613..3616817
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQ254_RS17440 (KQ254_17355) | pilT | 3614613..3615650 (+) | 1038 | WP_000355489.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| KQ254_RS17445 (KQ254_17360) | - | 3615678..3615797 (+) | 120 | Protein_3411 | type IV pili twitching motility protein PilT | - |
| KQ254_RS17450 (KQ254_17365) | - | 3615807..3616775 (-) | 969 | WP_012308653.1 | IS30 family transposase | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38312.92 Da Isoelectric Point: 6.7271
>NTDB_id=578107 KQ254_RS17440 WP_000355489.1 3614613..3615650(+) (pilT) [Acinetobacter baumannii strain UC20804]
MDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRLVYDIMNDKQRRDYEEKLETDFSFEVPNVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGQIFKDICDYPRGIVLVTGPTGSGKSTTLAAMLDYINENRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANHGMTTLDQSL
KGLVARGVISPQTARTAAKQPESFL
MDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRLVYDIMNDKQRRDYEEKLETDFSFEVPNVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGQIFKDICDYPRGIVLVTGPTGSGKSTTLAAMLDYINENRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANHGMTTLDQSL
KGLVARGVISPQTARTAAKQPESFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=578107 KQ254_RS17440 WP_000355489.1 3614613..3615650(+) (pilT) [Acinetobacter baumannii strain UC20804]
ATGGATATTACAGAGCTACTCGCCTTCTCTGTGAAAAATGGCGCGTCCGATTTACATCTTTCTGCTGGCATGCCACCAAT
GATTCGTGTTGACGGTGAAGTTCGTCGTATTAACTTACCAGCTCTAGAACATAAAGATGTCCACCGTCTTGTTTACGACA
TCATGAATGATAAACAGCGCCGTGACTATGAAGAAAAACTCGAAACTGACTTTTCTTTTGAAGTACCTAATGTTGCGCGT
TTCCGTGTTAACGCATTTAACCAAAACCGTGGTGCTGGTGCAGTATTTCGTACCATTCCATCTAAAGTCCTCACCATGGA
AGATCTAGGTCTAGGACAAATCTTTAAAGATATTTGCGACTATCCTCGTGGCATTGTACTGGTGACAGGACCAACAGGTT
CGGGTAAATCAACTACGCTTGCAGCGATGCTCGATTATATTAACGAAAACCGCTATGACCATATTTTAACGGTGGAAGAT
CCAATCGAATTTGTACATCAATCTAAGAAATGTCTCATTAACCAGCGTGAAGTGCATCGTGACACACACGGCTTTAATGA
AGCACTTCGCTCAGCACTGCGTGAAGACCCAGATATTATTTTGGTCGGTGAGATGCGTGACCTTGAAACCATTCGTTTAG
CATTAACTGCTGCCGAAACAGGTCACTTGGTGTTTGGTACGCTCCACACCACGTCGGCAGCAAAAACCATTGACCGTGTG
ATTGACGTATTCCCTGCCGAAGAAAAAGACATGGTTCGTGCCATGCTGTCTGAATCTTTACAAGCGGTTATTTCACAAAC
CCTGCTTAAAAAGAATGGCGGTGGCCGTGTCGCAGCACATGAGATCATGATTGGTATTCCGGCTATTCGTAACTTAATTC
GTGAAAACAAAGTCGCGCAAATGTACTCAGCCATTCAAACTGGTGCCAATCATGGCATGACCACACTCGACCAAAGCTTA
AAAGGCTTAGTCGCTCGCGGTGTAATTAGCCCGCAAACGGCTCGTACTGCAGCAAAACAGCCTGAATCATTCTTATAA
ATGGATATTACAGAGCTACTCGCCTTCTCTGTGAAAAATGGCGCGTCCGATTTACATCTTTCTGCTGGCATGCCACCAAT
GATTCGTGTTGACGGTGAAGTTCGTCGTATTAACTTACCAGCTCTAGAACATAAAGATGTCCACCGTCTTGTTTACGACA
TCATGAATGATAAACAGCGCCGTGACTATGAAGAAAAACTCGAAACTGACTTTTCTTTTGAAGTACCTAATGTTGCGCGT
TTCCGTGTTAACGCATTTAACCAAAACCGTGGTGCTGGTGCAGTATTTCGTACCATTCCATCTAAAGTCCTCACCATGGA
AGATCTAGGTCTAGGACAAATCTTTAAAGATATTTGCGACTATCCTCGTGGCATTGTACTGGTGACAGGACCAACAGGTT
CGGGTAAATCAACTACGCTTGCAGCGATGCTCGATTATATTAACGAAAACCGCTATGACCATATTTTAACGGTGGAAGAT
CCAATCGAATTTGTACATCAATCTAAGAAATGTCTCATTAACCAGCGTGAAGTGCATCGTGACACACACGGCTTTAATGA
AGCACTTCGCTCAGCACTGCGTGAAGACCCAGATATTATTTTGGTCGGTGAGATGCGTGACCTTGAAACCATTCGTTTAG
CATTAACTGCTGCCGAAACAGGTCACTTGGTGTTTGGTACGCTCCACACCACGTCGGCAGCAAAAACCATTGACCGTGTG
ATTGACGTATTCCCTGCCGAAGAAAAAGACATGGTTCGTGCCATGCTGTCTGAATCTTTACAAGCGGTTATTTCACAAAC
CCTGCTTAAAAAGAATGGCGGTGGCCGTGTCGCAGCACATGAGATCATGATTGGTATTCCGGCTATTCGTAACTTAATTC
GTGAAAACAAAGTCGCGCAAATGTACTCAGCCATTCAAACTGGTGCCAATCATGGCATGACCACACTCGACCAAAGCTTA
AAAGGCTTAGTCGCTCGCGGTGTAATTAGCCCGCAAACGGCTCGTACTGCAGCAAAACAGCCTGAATCATTCTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |
| pilT | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| pilT | Acinetobacter nosocomialis M2 |
99.71 |
100 |
0.997 |
| pilT | Acinetobacter baylyi ADP1 |
88.953 |
99.71 |
0.887 |
| pilT | Pseudomonas aeruginosa PAK |
84.302 |
99.71 |
0.841 |
| pilT | Pseudomonas stutzeri DSM 10701 |
84.012 |
99.71 |
0.838 |
| pilT | Legionella pneumophila strain Lp02 |
75.581 |
99.71 |
0.754 |
| pilT | Legionella pneumophila strain ERS1305867 |
75.581 |
99.71 |
0.754 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
71.726 |
97.391 |
0.699 |
| pilT | Vibrio cholerae strain A1552 |
71.726 |
97.391 |
0.699 |
| pilT | Neisseria meningitidis 8013 |
68.116 |
100 |
0.681 |
| pilT | Neisseria gonorrhoeae MS11 |
67.826 |
100 |
0.678 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.174 |
100 |
0.522 |
| pilU | Vibrio cholerae strain A1552 |
41.593 |
98.261 |
0.409 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.597 |
97.101 |
0.394 |
| pilU | Acinetobacter baylyi ADP1 |
38.728 |
100 |
0.388 |