Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KIH05_RS03655 Genome accession   NZ_CP074585
Coordinates   764613..765023 (+) Length   136 a.a.
NCBI ID   WP_001200144.1    Uniprot ID   A0A6F8TJU0
Organism   Acinetobacter baumannii strain ATCC 19606     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 759613..770023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIH05_RS03640 (KIH05_03635) - 760602..762908 (+) 2307 WP_000259109.1 RelA/SpoT family protein -
  KIH05_RS03645 (KIH05_03640) - 762953..763726 (-) 774 WP_000682841.1 SDR family oxidoreductase -
  KIH05_RS03650 (KIH05_03645) mazG 763838..764644 (+) 807 WP_000359488.1 nucleoside triphosphate pyrophosphohydrolase -
  KIH05_RS03655 (KIH05_03650) comEA 764613..765023 (+) 411 WP_001200144.1 ComEA family DNA-binding protein Machinery gene
  KIH05_RS03660 (KIH05_03655) pcnB 765148..766611 (+) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  KIH05_RS03665 (KIH05_03660) folK 766608..767090 (+) 483 WP_000219224.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  KIH05_RS03670 (KIH05_03665) panB 767136..767945 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  KIH05_RS03675 (KIH05_03670) panC 767949..768797 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  KIH05_RS03680 (KIH05_03675) rapZ 768820..769671 (+) 852 WP_000821671.1 RNase adapter RapZ -
  KIH05_RS03685 (KIH05_03680) - 769668..769937 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15747.09 Da        Isoelectric Point: 10.4475

>NTDB_id=565480 KIH05_RS03655 WP_001200144.1 764613..765023(+) (comEA) [Acinetobacter baumannii strain ATCC 19606]
MQYSMRFWKNKYFILIMLCLGVVSPSVYAQSFDQNFQEWKAKQQMYDQKLKITKSSHSNGSKISQTKNFNDFTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=565480 KIH05_RS03655 WP_001200144.1 764613..765023(+) (comEA) [Acinetobacter baumannii strain ATCC 19606]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTATTTTAATAATGTTGTGCTTGGGAGTAGTTTCACCTTCAGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAAGATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTTTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6F8TJU0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963
  comEA Acinetobacter baumannii D1279779

93.382

100

0.934
  comEA Acinetobacter baylyi ADP1

41.985

96.324

0.404