Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   J7T61_RS05530 Genome accession   NZ_CP072441
Coordinates   1050599..1051939 (-) Length   446 a.a.
NCBI ID   WP_372429118.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24728     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1045599..1056939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T61_RS05500 (J7T61_05510) - 1045719..1046105 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  J7T61_RS05505 (J7T61_05515) - 1046197..1047075 (-) 879 Protein_1029 GNAT family N-acetyltransferase -
  J7T61_RS05510 (J7T61_05520) yidA 1047283..1048092 (+) 810 WP_011226081.1 sugar-phosphatase -
  J7T61_RS05515 (J7T61_05525) - 1048094..1049308 (+) 1215 WP_002953123.1 aminoacyltransferase -
  J7T61_RS05520 (J7T61_05530) - 1049360..1049721 (-) 362 Protein_1032 YbaN family protein -
  J7T61_RS05525 (J7T61_05535) vicX 1049781..1050593 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  J7T61_RS05530 (J7T61_05540) vicK 1050599..1051939 (-) 1341 WP_372429118.1 cell wall metabolism sensor histidine kinase VicK Regulator
  J7T61_RS05535 (J7T61_05545) vicR 1051932..1052639 (-) 708 WP_011681206.1 response regulator YycF Regulator
  J7T61_RS05540 (J7T61_05550) - 1053175..1053942 (+) 768 WP_011681207.1 amino acid ABC transporter ATP-binding protein -
  J7T61_RS05545 (J7T61_05555) - 1053954..1054787 (+) 834 WP_011681208.1 transporter substrate-binding domain-containing protein -
  J7T61_RS05550 (J7T61_05560) - 1054805..1055503 (+) 699 WP_011681209.1 amino acid ABC transporter permease -
  J7T61_RS05555 (J7T61_05565) - 1055515..1056165 (+) 651 WP_011226088.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 446 a.a.        Molecular weight: 50782.07 Da        Isoelectric Point: 5.2535

>NTDB_id=553280 J7T61_RS05530 WP_372429118.1 1050599..1051939(-) (vicK) [Streptococcus thermophilus strain S24728]
MTSIGLNITSFELALLFTLLFVAFYFIFLAYRDYQQVKNIRKLTKRVKSLMAGNYNEKLRIKGDSELLELANSLNDLSDV
FRLTQENLIQEKNRLSSVLSYMSDGVIATNRLGQITMINSTAQRLLNLDRETATQMSILDILDGENPYTYSELLSKTPEI
HLSRRDANDEFVTLRVNFALIRKESGFISGLVAVLHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALNE
EIAPNFIKVSLDETNRMMRMISDLLALSRIDNKSTQLNVEMTNFTAFMTYILNRFGQIKSQETNPGKSYEIIRDYPVNSI
WVEIDTDKMTQVIDNILNNAIKYSPDGGKITVSMKTTDTQLIVSISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTGL
GLSIAKEIVKQHNGFIWAKSEYGKGSTFTIVLPYDQDAMMVDEWEM

Nucleotide


Download         Length: 1341 bp        

>NTDB_id=553280 J7T61_RS05530 WP_372429118.1 1050599..1051939(-) (vicK) [Streptococcus thermophilus strain S24728]
ATGACTAGTATTGGCTTAAATATTACAAGCTTTGAACTAGCCTTACTCTTTACGCTCCTCTTTGTTGCTTTCTATTTCAT
TTTTCTAGCTTATCGTGATTATCAACAGGTCAAAAATATCCGAAAGTTGACTAAGAGAGTCAAATCCCTTATGGCAGGTA
ATTATAATGAAAAATTACGCATAAAGGGAGATTCAGAGCTTTTAGAGCTAGCTAATAGCTTGAATGATTTGTCGGACGTC
TTTCGTTTGACACAAGAAAATCTAATCCAGGAAAAAAACCGCTTATCATCTGTTCTTTCGTACATGAGTGACGGGGTTAT
TGCGACCAATCGCCTTGGTCAGATTACTATGATTAATAGTACTGCCCAACGCTTGTTGAATTTAGATCGCGAAACTGCGA
CTCAGATGTCTATTTTGGATATATTAGATGGTGAGAATCCCTATACCTATAGTGAATTGTTGTCTAAGACACCCGAAATC
CATCTGTCGCGTCGAGATGCTAACGATGAATTTGTGACGCTACGTGTTAATTTTGCATTAATTCGTAAGGAATCTGGTTT
TATTTCAGGTCTGGTAGCCGTTCTTCATGATGCCACTGAGCAGGAAAAAGAAGAGCGCGAACGCCGTCTCTTCGTATCAA
ATGTTAGTCACGAATTGCGGACGCCTTTAACTTCTGTGAAATCCTATCTTGAAGCGCTTGATGATGGTGCTCTCAACGAA
GAGATTGCTCCAAACTTTATCAAAGTTTCTTTAGATGAAACCAACCGCATGATGCGTATGATTTCTGACCTCTTGGCATT
ATCTCGAATTGACAATAAAAGCACACAGCTTAATGTTGAAATGACAAACTTTACAGCCTTTATGACCTATATCTTGAATC
GGTTTGGTCAAATTAAGAGTCAAGAAACTAATCCAGGTAAGTCTTATGAAATCATTCGAGATTACCCAGTAAACTCTATT
TGGGTGGAAATTGATACTGATAAGATGACCCAGGTCATAGATAATATACTTAATAATGCCATCAAGTATTCTCCTGATGG
TGGGAAAATTACAGTATCTATGAAAACGACAGACACTCAGTTGATTGTTTCTATTTCTGACCAAGGTTTAGGAATTCCTA
AAAAAGATTTACCTCTGATTTTTGACCGTTTTTACCGTGTTGATAAGGCCAGAAGTCGTGCTCAGGGTGGAACAGGACTT
GGCTTGTCCATTGCAAAAGAAATTGTTAAACAACATAATGGCTTCATTTGGGCTAAGAGTGAGTATGGTAAGGGATCAAC
TTTTACAATTGTGCTTCCATATGACCAGGACGCAATGATGGTCGATGAATGGGAGATGTAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(208-272)

PAS fold (PAS)

(94-197)

HAMP domain (HAMP)

(37-79)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(325-435)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

74.155

92.825

0.688
  micB Streptococcus pneumoniae Cp1015

66.282

97.085

0.644