Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CAL7507_RS08850 | Genome accession | NC_019682 |
| Coordinates | 2035683..2036807 (+) | Length | 374 a.a. |
| NCBI ID | WP_015128124.1 | Uniprot ID | K9PGM9 |
| Organism | Calothrix sp. PCC 7507 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2030683..2041807
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAL7507_RS08840 (Cal7507_1853) | grpE | 2032306..2033046 (-) | 741 | WP_015128122.1 | nucleotide exchange factor GrpE | - |
| CAL7507_RS08845 (Cal7507_1854) | pilB/pilB1 | 2033571..2035583 (+) | 2013 | WP_015128123.1 | GspE/PulE family protein | Machinery gene |
| CAL7507_RS08850 (Cal7507_1855) | pilT | 2035683..2036807 (+) | 1125 | WP_015128124.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CAL7507_RS08855 (Cal7507_1856) | - | 2037035..2038258 (+) | 1224 | WP_015128125.1 | type II secretion system F family protein | - |
| CAL7507_RS08860 (Cal7507_1858) | - | 2038479..2039045 (+) | 567 | WP_015128127.1 | hypothetical protein | - |
| CAL7507_RS08865 (Cal7507_1859) | - | 2039394..2039624 (+) | 231 | WP_015128128.1 | hypothetical protein | - |
| CAL7507_RS08870 (Cal7507_1860) | - | 2039643..2041286 (+) | 1644 | WP_015128129.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 374 a.a. Molecular weight: 40932.21 Da Isoelectric Point: 7.1085
>NTDB_id=54707 CAL7507_RS08850 WP_015128124.1 2035683..2036807(+) (pilT) [Calothrix sp. PCC 7507]
MEMMIEDLMEQMIEMGGSDMHLTAGLPPYFRISGKLTPIGEDVLTADQCQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKDRGAYAACLRALSSKIPNFEKLGLPDVVREMTEKPRGLILVTGPTGSGKTTTLAAMIDLINRTKAEHILTV
EDPIEFVYESIKSLVHQRQLGEDTKSFANALKAALREDPDIVLVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RIIDVFPHERQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEILIVTPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADYYKAGTISFEAAMSKTSKPDEIQRLIGGTAPPPAAGAKPGAARSH
MEMMIEDLMEQMIEMGGSDMHLTAGLPPYFRISGKLTPIGEDVLTADQCQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKDRGAYAACLRALSSKIPNFEKLGLPDVVREMTEKPRGLILVTGPTGSGKTTTLAAMIDLINRTKAEHILTV
EDPIEFVYESIKSLVHQRQLGEDTKSFANALKAALREDPDIVLVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RIIDVFPHERQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEILIVTPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADYYKAGTISFEAAMSKTSKPDEIQRLIGGTAPPPAAGAKPGAARSH
Nucleotide
Download Length: 1125 bp
>NTDB_id=54707 CAL7507_RS08850 WP_015128124.1 2035683..2036807(+) (pilT) [Calothrix sp. PCC 7507]
ATGGAAATGATGATTGAAGATTTGATGGAACAGATGATTGAAATGGGTGGTTCGGATATGCATTTAACTGCAGGACTACC
TCCTTACTTTCGCATCAGTGGCAAACTCACCCCCATCGGGGAAGATGTATTGACTGCAGATCAGTGTCAAAGACTGATTT
TTAGTATGCTCAACAATACACAGCGTAAAACCTTAGAGCAGACTTGGGAATTAGATTGCTCCTATGGTGTTAAAGGTTTG
GCACGCTTCCGGGTCAATGTTTATAAGGATCGTGGTGCTTACGCTGCTTGTTTACGTGCTTTGAGTTCTAAAATTCCTAA
CTTTGAAAAGCTAGGTTTGCCTGATGTGGTGCGGGAAATGACGGAAAAACCTCGGGGATTAATTCTAGTTACAGGCCCCA
CAGGTTCTGGAAAGACAACTACTCTAGCGGCAATGATTGACTTAATTAACCGCACTAAAGCCGAGCATATTTTGACTGTA
GAAGACCCGATTGAATTTGTTTATGAATCCATTAAAAGCTTGGTTCATCAACGCCAATTGGGTGAAGATACCAAGAGTTT
TGCTAATGCTTTGAAAGCAGCTTTGCGAGAAGACCCAGATATTGTTTTGGTGGGAGAAATGCGCGATTTGGAAACGATTT
CTTTGGCGATTTCTGCCGCAGAAACCGGACACTTGGTATTTGGTACATTACACACCAGTTCCGCCGCCCAGACTGTTGAC
CGGATTATTGATGTTTTTCCCCATGAAAGACAAACCCAGGTGCGCGTGCAGTTGTCTAACTCATTAGTAGCAGTTTTTAG
CCAAACTTTAGTACCAAAGAAAAACCCCAAGCCTGGTGAATATGGTCGGGTAATGGCTCAAGAAATTCTCATCGTTACTC
CCGCTATTTCTAACTTAATTCGAGAAGGTAAAACATCTCAAATCTACTCAGCTATTCAGACTGGCGGTAAGTTGGGTATG
CAAACGCTAGAAAAGGTTTTAGCCGATTATTACAAAGCGGGAACTATCTCCTTTGAAGCCGCGATGTCTAAGACTTCTAA
GCCCGATGAAATTCAACGGCTCATCGGTGGTACAGCACCGCCACCCGCCGCAGGCGCAAAACCTGGTGCTGCTAGATCCC
ATTAA
ATGGAAATGATGATTGAAGATTTGATGGAACAGATGATTGAAATGGGTGGTTCGGATATGCATTTAACTGCAGGACTACC
TCCTTACTTTCGCATCAGTGGCAAACTCACCCCCATCGGGGAAGATGTATTGACTGCAGATCAGTGTCAAAGACTGATTT
TTAGTATGCTCAACAATACACAGCGTAAAACCTTAGAGCAGACTTGGGAATTAGATTGCTCCTATGGTGTTAAAGGTTTG
GCACGCTTCCGGGTCAATGTTTATAAGGATCGTGGTGCTTACGCTGCTTGTTTACGTGCTTTGAGTTCTAAAATTCCTAA
CTTTGAAAAGCTAGGTTTGCCTGATGTGGTGCGGGAAATGACGGAAAAACCTCGGGGATTAATTCTAGTTACAGGCCCCA
CAGGTTCTGGAAAGACAACTACTCTAGCGGCAATGATTGACTTAATTAACCGCACTAAAGCCGAGCATATTTTGACTGTA
GAAGACCCGATTGAATTTGTTTATGAATCCATTAAAAGCTTGGTTCATCAACGCCAATTGGGTGAAGATACCAAGAGTTT
TGCTAATGCTTTGAAAGCAGCTTTGCGAGAAGACCCAGATATTGTTTTGGTGGGAGAAATGCGCGATTTGGAAACGATTT
CTTTGGCGATTTCTGCCGCAGAAACCGGACACTTGGTATTTGGTACATTACACACCAGTTCCGCCGCCCAGACTGTTGAC
CGGATTATTGATGTTTTTCCCCATGAAAGACAAACCCAGGTGCGCGTGCAGTTGTCTAACTCATTAGTAGCAGTTTTTAG
CCAAACTTTAGTACCAAAGAAAAACCCCAAGCCTGGTGAATATGGTCGGGTAATGGCTCAAGAAATTCTCATCGTTACTC
CCGCTATTTCTAACTTAATTCGAGAAGGTAAAACATCTCAAATCTACTCAGCTATTCAGACTGGCGGTAAGTTGGGTATG
CAAACGCTAGAAAAGGTTTTAGCCGATTATTACAAAGCGGGAACTATCTCCTTTGAAGCCGCGATGTCTAAGACTTCTAA
GCCCGATGAAATTCAACGGCTCATCGGTGGTACAGCACCGCCACCCGCCGCAGGCGCAAAACCTGGTGCTGCTAGATCCC
ATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.155 |
93.316 |
0.505 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.868 |
93.316 |
0.503 |
| pilT | Legionella pneumophila strain Lp02 |
52.45 |
92.781 |
0.487 |
| pilT | Legionella pneumophila strain ERS1305867 |
52.45 |
92.781 |
0.487 |
| pilT | Acinetobacter baumannii strain A118 |
51.873 |
92.781 |
0.481 |
| pilT | Acinetobacter nosocomialis M2 |
51.873 |
92.781 |
0.481 |
| pilT | Acinetobacter baumannii D1279779 |
51.873 |
92.781 |
0.481 |
| pilT | Acinetobacter baylyi ADP1 |
51.585 |
92.781 |
0.479 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
47.709 |
99.198 |
0.473 |
| pilT | Neisseria gonorrhoeae MS11 |
50.442 |
90.642 |
0.457 |
| pilT | Neisseria meningitidis 8013 |
50.147 |
90.642 |
0.455 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.83 |
91.444 |
0.447 |
| pilT | Vibrio cholerae strain A1552 |
48.83 |
91.444 |
0.447 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.527 |
94.385 |
0.364 |
| pilU | Acinetobacter baylyi ADP1 |
38.244 |
94.385 |
0.361 |