Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NOS7107_RS06060 | Genome accession | NC_019676 |
| Coordinates | 1408969..1410087 (-) | Length | 372 a.a. |
| NCBI ID | WP_015112099.1 | Uniprot ID | - |
| Organism | Nostoc sp. PCC 7107 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1403969..1415087
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NOS7107_RS27150 (Nos7107_1215) | - | 1406537..1406776 (-) | 240 | WP_157373975.1 | hypothetical protein | - |
| NOS7107_RS06050 (Nos7107_1216) | - | 1406990..1407547 (-) | 558 | WP_015112097.1 | hypothetical protein | - |
| NOS7107_RS06055 (Nos7107_1217) | - | 1407642..1408865 (-) | 1224 | WP_015112098.1 | type II secretion system F family protein | - |
| NOS7107_RS06060 (Nos7107_1218) | pilT | 1408969..1410087 (-) | 1119 | WP_015112099.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| NOS7107_RS06065 (Nos7107_1219) | pilB/pilB1 | 1410126..1412138 (-) | 2013 | WP_015112100.1 | GspE/PulE family protein | Machinery gene |
| NOS7107_RS06070 (Nos7107_1220) | grpE | 1412466..1413215 (+) | 750 | WP_015112101.1 | nucleotide exchange factor GrpE | - |
Sequence
Protein
Download Length: 372 a.a. Molecular weight: 40759.02 Da Isoelectric Point: 7.1085
>NTDB_id=54656 NOS7107_RS06060 WP_015112099.1 1408969..1410087(-) (pilT) [Nostoc sp. PCC 7107]
MEMMIEDLMEQMIEMGGSDMHLSAGLPPYFRISGKLTPIGEEILTNDQCQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGSYAACLRALSSKIPNFEKLGLPDVVREMADKPRGLILVTGPTGSGKTTTLAAIIDLINRTKAEHILTV
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIVLVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RIIDVFPHERQTQVRVQLSNSLVAVFSQTLVSKKNPKPGEYGRVMAQEILIVTPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADYYKAGTISFEAAMSKTSKPDEIQRLIGATAPPAGAKPGAAKAH
MEMMIEDLMEQMIEMGGSDMHLSAGLPPYFRISGKLTPIGEEILTNDQCQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGSYAACLRALSSKIPNFEKLGLPDVVREMADKPRGLILVTGPTGSGKTTTLAAIIDLINRTKAEHILTV
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIVLVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RIIDVFPHERQTQVRVQLSNSLVAVFSQTLVSKKNPKPGEYGRVMAQEILIVTPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADYYKAGTISFEAAMSKTSKPDEIQRLIGATAPPAGAKPGAAKAH
Nucleotide
Download Length: 1119 bp
>NTDB_id=54656 NOS7107_RS06060 WP_015112099.1 1408969..1410087(-) (pilT) [Nostoc sp. PCC 7107]
ATGGAAATGATGATTGAAGACTTGATGGAACAAATGATTGAAATGGGTGGTTCGGATATGCACTTATCCGCAGGTTTGCC
TCCTTACTTTCGCATCAGTGGCAAACTGACACCTATCGGAGAGGAAATCTTGACTAATGATCAATGCCAAAGATTGATCT
TTAGTATGCTCAACAATACCCAGCGTAAAACTTTAGAACAAACCTGGGAGTTAGATTGCTCTTATGGTGTGAAGGGTTTG
GCTCGTTTTCGGGTGAATGTTTACAAAGAACGAGGCTCTTACGCTGCTTGTTTACGGGCGTTAAGTTCTAAGATTCCTAA
CTTTGAAAAATTGGGTCTGCCAGATGTAGTGCGGGAAATGGCAGATAAGCCCAGAGGATTAATTTTGGTGACAGGCCCTA
CAGGTTCAGGTAAAACAACTACCCTAGCCGCAATTATCGACTTAATTAACCGCACTAAAGCAGAGCATATTTTGACTGTA
GAAGACCCAATTGAATTTGTTTACGAGCCAATTAAAAGCTTAGTTCACCAAAGACAATTGGGCGAAGATACAAAAAGCTT
TGCTAATGCCTTAAAAGCAGCTTTGCGTGAAGACCCAGATATTGTGCTGGTGGGAGAAATGCGGGATTTAGAAACAATTT
CTTTGGCGATTTCAGCCGCAGAAACTGGACACTTGGTCTTTGGAACACTACACACCAGTTCAGCCGCCCAAACAGTTGAC
CGGATTATCGACGTTTTTCCCCATGAAAGACAAACTCAAGTACGGGTACAGTTATCTAACTCTCTCGTAGCTGTATTTAG
CCAAACTTTAGTATCCAAGAAAAACCCTAAACCTGGGGAATATGGCCGAGTCATGGCTCAAGAAATTCTGATTGTTACTC
CTGCTATTTCTAACTTGATTAGAGAAGGCAAAACTTCACAAATTTACTCAGCTATTCAGACTGGGGGCAAATTAGGAATG
CAAACTTTGGAGAAAGTTTTAGCAGATTATTACAAAGCTGGCACTATTTCTTTTGAAGCAGCCATGTCTAAAACTTCCAA
GCCAGATGAAATTCAACGTCTTATTGGTGCTACAGCACCCCCAGCCGGAGCAAAACCTGGTGCTGCTAAAGCCCACTAG
ATGGAAATGATGATTGAAGACTTGATGGAACAAATGATTGAAATGGGTGGTTCGGATATGCACTTATCCGCAGGTTTGCC
TCCTTACTTTCGCATCAGTGGCAAACTGACACCTATCGGAGAGGAAATCTTGACTAATGATCAATGCCAAAGATTGATCT
TTAGTATGCTCAACAATACCCAGCGTAAAACTTTAGAACAAACCTGGGAGTTAGATTGCTCTTATGGTGTGAAGGGTTTG
GCTCGTTTTCGGGTGAATGTTTACAAAGAACGAGGCTCTTACGCTGCTTGTTTACGGGCGTTAAGTTCTAAGATTCCTAA
CTTTGAAAAATTGGGTCTGCCAGATGTAGTGCGGGAAATGGCAGATAAGCCCAGAGGATTAATTTTGGTGACAGGCCCTA
CAGGTTCAGGTAAAACAACTACCCTAGCCGCAATTATCGACTTAATTAACCGCACTAAAGCAGAGCATATTTTGACTGTA
GAAGACCCAATTGAATTTGTTTACGAGCCAATTAAAAGCTTAGTTCACCAAAGACAATTGGGCGAAGATACAAAAAGCTT
TGCTAATGCCTTAAAAGCAGCTTTGCGTGAAGACCCAGATATTGTGCTGGTGGGAGAAATGCGGGATTTAGAAACAATTT
CTTTGGCGATTTCAGCCGCAGAAACTGGACACTTGGTCTTTGGAACACTACACACCAGTTCAGCCGCCCAAACAGTTGAC
CGGATTATCGACGTTTTTCCCCATGAAAGACAAACTCAAGTACGGGTACAGTTATCTAACTCTCTCGTAGCTGTATTTAG
CCAAACTTTAGTATCCAAGAAAAACCCTAAACCTGGGGAATATGGCCGAGTCATGGCTCAAGAAATTCTGATTGTTACTC
CTGCTATTTCTAACTTGATTAGAGAAGGCAAAACTTCACAAATTTACTCAGCTATTCAGACTGGGGGCAAATTAGGAATG
CAAACTTTGGAGAAAGTTTTAGCAGATTATTACAAAGCTGGCACTATTTCTTTTGAAGCAGCCATGTCTAAAACTTCCAA
GCCAGATGAAATTCAACGTCTTATTGGTGCTACAGCACCCCCAGCCGGAGCAAAACCTGGTGCTGCTAAAGCCCACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.155 |
93.817 |
0.508 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.582 |
93.817 |
0.503 |
| pilT | Legionella pneumophila strain ERS1305867 |
52.738 |
93.28 |
0.492 |
| pilT | Legionella pneumophila strain Lp02 |
52.738 |
93.28 |
0.492 |
| pilT | Acinetobacter baylyi ADP1 |
52.161 |
93.28 |
0.487 |
| pilT | Acinetobacter baumannii strain A118 |
51.297 |
93.28 |
0.478 |
| pilT | Acinetobacter baumannii D1279779 |
51.297 |
93.28 |
0.478 |
| pilT | Acinetobacter nosocomialis M2 |
51.297 |
93.28 |
0.478 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.857 |
94.086 |
0.46 |
| pilT | Neisseria gonorrhoeae MS11 |
49.853 |
91.129 |
0.454 |
| pilT | Neisseria meningitidis 8013 |
49.558 |
91.129 |
0.452 |
| pilT | Vibrio cholerae strain A1552 |
49.123 |
91.935 |
0.452 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.123 |
91.935 |
0.452 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.244 |
94.892 |
0.363 |
| pilU | Acinetobacter baylyi ADP1 |
37.96 |
94.892 |
0.36 |