Detailed information NTG0534093

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: JRC48_RS08425
• Genome accession: NZ_CP069349
• Coordinates: 1764283..1765305 (-)
• Length: 340 a.a.
• NCBI ID: WP_235069155.1
• Uniprot ID: -
• Organism: Turicibacter sp. TJ11
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1759283..1770305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JRC48_RS08405	ychF	1759308..1760408 (-)	1101	WP_235069151.1	redox-regulated ATPase YchF	-
JRC48_RS08410	-	1760641..1761033 (+)	393	WP_235069152.1	NUDIX domain-containing protein	-
JRC48_RS08415	-	1761059..1763302 (-)	2244	WP_235069153.1	glycosyltransferase	-
JRC48_RS08420	-	1763464..1764231 (-)	768	WP_235069154.1	A24 family peptidase	-
JRC48_RS08425	pilT	1764283..1765305 (-)	1023	WP_235069155.1	type IV pilus twitching motility protein PilT	Machinery gene

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 37846.73 Da
• Isoelectric Point: 6.3673

>NTDB_id=534093 JRC48_RS08425 WP_235069155.1 1764283..1765305(-) (pilT) [Turicibacter sp. TJ11]
MKINDILTEAIHLKASDIHITVGLPTMIRLRGELTPLNDEVMTPSLVNQLVKEIIPDEHFSKFESELQLDFSHSISGVSR
FRVNAYHQRGQCALAIRPIPSQIPTLEELELPLGLKGLVEKPRGLVLVTGPTGSGKSTTLAAMINHVNQNFHKHIITLED
PIEFQHRHQKCMINQREIGSDVYDFNQALRVALRQDPDIILVGEMRDLETIQIALTAAETGHLVIGTLHTSSAASTIERI
IDVFPAEKQSQIRMQLAGSLVGVVAQRLFKRQDADGRRAACEIMINTPAIANLIRQEKVYQIPSVIQTSRDVGMQTMEMA
INELLMYGVINVSDAKGYLD

Nucleotide

• Length: 1023 bp

>NTDB_id=534093 JRC48_RS08425 WP_235069155.1 1764283..1765305(-) (pilT) [Turicibacter sp. TJ11]
ATGAAAATTAATGATATTCTAACCGAAGCGATTCATTTAAAAGCTTCAGATATTCATATTACAGTAGGTTTACCTACGAT
GATTCGTTTGCGAGGAGAGCTAACGCCTTTAAATGATGAGGTGATGACACCTAGTTTAGTTAATCAATTAGTTAAAGAAA
TTATTCCCGATGAACATTTTAGTAAGTTCGAATCGGAGTTGCAGTTAGATTTTTCGCATAGTATTTCAGGCGTTTCTCGT
TTTCGTGTGAATGCTTATCATCAACGAGGGCAATGTGCTTTAGCAATCCGACCTATTCCAAGTCAAATTCCAACCTTAGA
AGAACTAGAATTACCGCTAGGACTCAAGGGATTGGTTGAAAAACCTAGAGGGTTAGTACTAGTAACAGGTCCAACAGGTT
CCGGGAAATCTACGACATTAGCTGCTATGATTAATCATGTGAATCAAAATTTTCATAAGCACATTATTACACTCGAAGAT
CCGATTGAGTTTCAACATCGTCATCAAAAGTGTATGATTAATCAGCGGGAAATTGGTTCGGATGTTTATGATTTTAACCA
AGCTTTACGAGTCGCTCTTCGTCAAGATCCAGACATTATTTTAGTTGGAGAAATGCGAGATTTAGAAACCATTCAAATTG
CTTTAACAGCAGCGGAAACAGGACATCTTGTGATTGGAACGTTACATACGTCATCGGCCGCTTCAACGATTGAACGTATT
ATTGATGTTTTTCCAGCTGAAAAACAAAGCCAAATTCGGATGCAGTTAGCTGGAAGTTTAGTGGGAGTCGTGGCGCAACG
TTTATTTAAACGTCAAGATGCAGATGGACGACGCGCTGCTTGCGAGATTATGATTAATACGCCAGCTATTGCTAATTTAA
TTCGTCAAGAAAAAGTTTATCAAATTCCAAGCGTCATTCAAACGAGTCGTGATGTTGGGATGCAAACGATGGAGATGGCC
ATTAATGAATTATTAATGTATGGGGTAATTAATGTTTCAGATGCAAAAGGTTATTTAGATTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (5-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Vibrio cholerae strain A1552	52.493	100	0.526
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	52.493	100	0.526
pilT	Acinetobacter baylyi ADP1	52.522	99.118	0.521
pilT	Pseudomonas stutzeri DSM 10701	52.083	98.824	0.515
pilT	Pseudomonas aeruginosa PAK	51.786	98.824	0.512
pilT	Acinetobacter baumannii D1279779	51.786	98.824	0.512
pilT	Acinetobacter baumannii strain A118	51.786	98.824	0.512
pilT	Acinetobacter nosocomialis M2	51.786	98.824	0.512
pilT	Legionella pneumophila strain Lp02	51.36	97.353	0.5
pilT	Legionella pneumophila strain ERS1305867	51.36	97.353	0.5
pilT	Neisseria meningitidis 8013	50.151	97.353	0.488
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	50.154	95.588	0.479
pilT	Neisseria gonorrhoeae MS11	49.394	97.059	0.479
pilU	Pseudomonas stutzeri DSM 10701	42.388	98.529	0.418
pilU	Acinetobacter baylyi ADP1	41.349	100	0.415
pilU	Vibrio cholerae strain A1552	41.493	98.529	0.409