Detailed information NTG0051744

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: ECOPMV1_RS07680
• Genome accession: NC_022370
• Coordinates: 3338134..3339339 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161829.1
• Uniprot ID: A0A0H2Z2G4
• Organism: Escherichia coli PMV-1
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3333134..3344339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECOPMV1_RS07695 (ECOPMV1_03244)	-	3333649..3335325 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
ECOPMV1_RS07690 (ECOPMV1_03245)	kdsB	3335335..3336075 (+)	741	WP_000030755.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ECOPMV1_RS07685 (ECOPMV1_03246)	-	3336072..3338099 (+)	2028	WP_000579525.1	capsular polysaccharide biosynthesis protein	-
ECOPMV1_RS07680 (ECOPMV1_03247)	kpsS	3338134..3339339 (+)	1206	WP_001161829.1	capsular biosynthesis protein	Regulator
ECOPMV1_RS07675 (ECOPMV1_03248)	-	3339489..3340718 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
ECOPMV1_RS07670 (ECOPMV1_03249)	-	3340731..3341855 (-)	1125	WP_048481468.1	DUF6716 putative glycosyltransferase	-
ECOPMV1_RS07665 (ECOPMV1_03250)	neuC	3341848..3343023 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
ECOPMV1_RS07660 (ECOPMV1_03251)	-	3343020..3344276 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47976.30 Da
• Isoelectric Point: 10.0024

>NTDB_id=51744 ECOPMV1_RS07680 WP_001161829.1 3338134..3339339(+) (kpsS) [Escherichia coli PMV-1]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=51744 ECOPMV1_RS07680 WP_001161829.1 3338134..3339339(+) (kpsS) [Escherichia coli PMV-1]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGACGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTAAGTAAGG
AATATGGCTTAAGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: A0A0H2Z2G4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.103	97.007	0.389