Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | INQ41_RS10375 | Genome accession | NZ_CP063656 |
| Coordinates | 2301873..2302265 (+) | Length | 130 a.a. |
| NCBI ID | WP_193984251.1 | Uniprot ID | A0A7S6ZRT4 |
| Organism | Novilysobacter ciconiae strain H21R20 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2296873..2307265
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INQ41_RS10360 (INQ41_10360) | - | 2298073..2299134 (-) | 1062 | WP_193984245.1 | homoserine O-succinyltransferase | - |
| INQ41_RS10365 (INQ41_10365) | - | 2299450..2300586 (+) | 1137 | WP_193984247.1 | phytase | - |
| INQ41_RS10370 (INQ41_10370) | - | 2300568..2301503 (+) | 936 | WP_193984249.1 | M23 family metallopeptidase | - |
| INQ41_RS10375 (INQ41_10375) | comP | 2301873..2302265 (+) | 393 | WP_193984251.1 | pilin | Machinery gene |
| INQ41_RS10380 (INQ41_10380) | pilB | 2302816..2304546 (+) | 1731 | WP_193984253.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| INQ41_RS10385 (INQ41_10385) | pilC | 2304741..2306000 (+) | 1260 | WP_193984254.1 | type II secretion system F family protein | Machinery gene |
| INQ41_RS10390 (INQ41_10390) | pilD | 2306014..2306877 (+) | 864 | WP_193984256.1 | A24 family peptidase | Machinery gene |
Sequence
Protein
Download Length: 130 a.a. Molecular weight: 13434.41 Da Isoelectric Point: 4.1796
>NTDB_id=496129 INQ41_RS10375 WP_193984251.1 2301873..2302265(+) (comP) [Novilysobacter ciconiae strain H21R20]
MKNVQKGFTLIELMIVVAIIAILAAIALPAYQDYMIRAKVSEGIVQASAAKVTVSENIMAETTDLCAGVNTTTLGDTTIS
CAAGTLSASVAANSATTVTFDLVPTAATGGVTWDCNNPSDTKYVPAECRE
MKNVQKGFTLIELMIVVAIIAILAAIALPAYQDYMIRAKVSEGIVQASAAKVTVSENIMAETTDLCAGVNTTTLGDTTIS
CAAGTLSASVAANSATTVTFDLVPTAATGGVTWDCNNPSDTKYVPAECRE
Nucleotide
Download Length: 393 bp
>NTDB_id=496129 INQ41_RS10375 WP_193984251.1 2301873..2302265(+) (comP) [Novilysobacter ciconiae strain H21R20]
ATGAAGAACGTACAGAAAGGTTTTACGCTCATCGAGCTGATGATCGTTGTTGCGATCATCGCGATCTTGGCTGCGATTGC
TCTGCCGGCTTATCAGGATTACATGATCAGGGCGAAGGTGTCCGAAGGCATCGTTCAAGCCAGTGCTGCGAAAGTGACCG
TCTCCGAAAATATCATGGCGGAAACGACTGACCTTTGCGCTGGGGTTAATACCACGACGCTTGGTGACACTACGATTAGC
TGCGCTGCCGGCACGCTGAGTGCATCTGTTGCCGCGAACTCGGCGACTACCGTCACCTTTGACTTGGTTCCGACTGCTGC
GACCGGTGGCGTAACATGGGATTGCAACAACCCAAGCGATACCAAGTATGTTCCAGCGGAATGCCGCGAATAA
ATGAAGAACGTACAGAAAGGTTTTACGCTCATCGAGCTGATGATCGTTGTTGCGATCATCGCGATCTTGGCTGCGATTGC
TCTGCCGGCTTATCAGGATTACATGATCAGGGCGAAGGTGTCCGAAGGCATCGTTCAAGCCAGTGCTGCGAAAGTGACCG
TCTCCGAAAATATCATGGCGGAAACGACTGACCTTTGCGCTGGGGTTAATACCACGACGCTTGGTGACACTACGATTAGC
TGCGCTGCCGGCACGCTGAGTGCATCTGTTGCCGCGAACTCGGCGACTACCGTCACCTTTGACTTGGTTCCGACTGCTGC
GACCGGTGGCGTAACATGGGATTGCAACAACCCAAGCGATACCAAGTATGTTCCAGCGGAATGCCGCGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
48.276 |
100 |
0.538 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
43.478 |
100 |
0.538 |
| pilA2 | Legionella pneumophila str. Paris |
46.324 |
100 |
0.485 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
46.324 |
100 |
0.485 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
37.736 |
100 |
0.462 |
| pilE | Neisseria gonorrhoeae MS11 |
35.625 |
100 |
0.438 |
| pilA/pilA1 | Eikenella corrodens VA1 |
35.948 |
100 |
0.423 |
| pilA | Vibrio campbellii strain DS40M4 |
34.194 |
100 |
0.408 |
| pilA | Acinetobacter baumannii strain A118 |
37.324 |
100 |
0.408 |
| pilA | Pseudomonas aeruginosa PAK |
34.694 |
100 |
0.392 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
35 |
100 |
0.377 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
35.556 |
100 |
0.369 |
| pilA | Haemophilus influenzae 86-028NP |
46.154 |
80 |
0.369 |