Detailed information NTG0048899

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SGGB_RS02010
• Genome accession: NC_017576
• Coordinates: 364788..365717 (+)
• Length: 309 a.a.
• NCBI ID: WP_009853407.1
• Uniprot ID: A0A060RH00
• Organism: Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 359788..370717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGGB_RS01990 (SGGB_0352)	-	360008..361663 (+)	1656	WP_009853403.1	peptide ABC transporter substrate-binding protein	-
SGGB_RS01995 (SGGB_0353)	-	361774..362688 (+)	915	WP_009853404.1	ABC transporter permease	-
SGGB_RS02000 (SGGB_0354)	-	362699..363730 (+)	1032	WP_009853405.1	ABC transporter permease	-
SGGB_RS02005 (SGGB_0355)	oppD	363742..364788 (+)	1047	WP_009853406.1	ABC transporter ATP-binding protein	Regulator
SGGB_RS02010 (SGGB_0356)	amiF	364788..365717 (+)	930	WP_009853407.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 35009.73 Da
• Isoelectric Point: 5.4462

>NTDB_id=48899 SGGB_RS02010 WP_009853407.1 364788..365717(+) (amiF) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
MTENRKKLVELKNVSLTFNEGKKNEVKAIDNISFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINKGEIDFDGETISHL
KGKELHEFRKNAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLVNSKEERDQKVQDLLALVGLNKDHSTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLTAIPEPDPESERNRIHEEYDPSAELDGQPREMREITPGHFVLCTEAEAEAYKQEL

Nucleotide

• Length: 930 bp

>NTDB_id=48899 SGGB_RS02010 WP_009853407.1 364788..365717(+) (amiF) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTATCATTGACTTTTAACGAAGGTAAAAAGAACGAAGTAAA
AGCTATTGATAATATCAGTTTTGATATTTACGAAGGTGAAGTTTTCGGTCTTGTTGGAGAATCAGGTTCTGGTAAGACAA
CCGTTGGTCGTGCTATTTTGAAATTGTACGACATTAATAAAGGTGAAATTGATTTTGATGGCGAAACTATCTCTCACCTT
AAAGGGAAAGAATTGCACGAATTCCGTAAAAATGCTCAAATGATTTTCCAAGACCCACAAGCTAGTCTTAATGGTCGTAT
GAAAATTCGTGACATTGTTGCGGAAGGACTTGACATCCATAAATTAGTTAACAGTAAAGAAGAACGTGACCAAAAAGTTC
AAGATTTACTTGCTTTAGTTGGACTTAACAAAGACCATTCAACACGCTATCCACATGAATTTTCAGGTGGACAACGTCAA
CGTATTGGTATCGCTCGTGCTCTTGCTGTTGAACCAAAGTTCATCATTGCCGATGAACCAATTTCAGCCCTTGACGTGTC
AATCCAAGCTCAAGTTGTTAACCTTATGCAAAAACTTCAAAGAGAACAGGGGTTAACATATCTCTTTATCGCTCACGATT
TGTCAATGGTTAAATACATCTCAGATCGTATTGGGGTTATGCACTGGGGTAAAATGCTTGAAATTGGAACATCTGATGAT
GTCTATAATCATCCAATTCACCCATATACTAAGAGCTTATTGACTGCAATTCCAGAACCAGACCCAGAATCTGAAAGAAA
TCGTATCCATGAAGAATACGATCCAAGTGCAGAACTAGATGGCCAACCACGTGAAATGCGTGAAATTACACCTGGCCACT
TTGTTCTTTGTACAGAAGCAGAAGCAGAAGCTTATAAACAAGAATTATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-272)

3D structure

• AlphaFold DB: A0A060RH00

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.426	98.706	0.537
amiF	Streptococcus salivarius strain HSISS4	54.426	98.706	0.537
amiF	Streptococcus thermophilus LMG 18311	54.098	98.706	0.534