Detailed information NTG0483928

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC772_RS10020
• Genome accession: NZ_CP061664
• Coordinates: 2154755..2155570 (-)
• Length: 271 a.a.
• NCBI ID: WP_191014856.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS28
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2149755..2160570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC772_RS09990 (IC772_09985)	-	2150065..2150505 (-)	441	WP_004701967.1	SRPBCC family protein	-
IC772_RS09995 (IC772_09990)	tadA	2150575..2151077 (-)	503	Protein_1966	tRNA adenosine(34) deaminase TadA	-
IC772_RS10000 (IC772_09995)	-	2151085..2152209 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC772_RS10005 (IC772_10000)	ung	2152206..2152919 (-)	714	WP_191014854.1	uracil-DNA glycosylase	-
IC772_RS10010 (IC772_10005)	-	2152970..2153566 (-)	597	WP_039251397.1	6-pyruvoyl trahydropterin synthase family protein	-
IC772_RS10015 (IC772_10010)	gspK	2153796..2154755 (-)	960	WP_174739125.1	type II secretion system minor pseudopilin GspK	-
IC772_RS10020 (IC772_10015)	xcpW	2154755..2155570 (-)	816	WP_191014856.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC772_RS10025 (IC772_10020)	xcpV	2155570..2155950 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC772_RS10030 (IC772_10025)	-	2155940..2156491 (-)	552	WP_004701984.1	type II secretion system protein	-
IC772_RS10035 (IC772_10030)	-	2156501..2157109 (-)	609	WP_058061711.1	TetR/AcrR family transcriptional regulator	-
IC772_RS10040 (IC772_10035)	-	2157147..2157920 (-)	774	WP_077168509.1	TatD family hydrolase	-
IC772_RS10045 (IC772_10040)	-	2157938..2158279 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC772_RS10050 (IC772_10045)	-	2158292..2159272 (-)	981	WP_191014857.1	DNA polymerase III subunit delta'	-
IC772_RS10055 (IC772_10050)	kdsB	2159284..2160045 (-)	762	WP_191014859.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30594.86 Da
• Isoelectric Point: 9.5382

>NTDB_id=483928 IC772_RS10020 WP_191014856.1 2154755..2155570(-) (xcpW) [Acinetobacter seifertii strain AS28]
MIKNKHFCTRSKVSRLTARSGIVSTDCSEHSSSSYAQTKRCFSDSYTRNTVSHLAARSSSARLARASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQVTVAGVSYEWIYSLNQSNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483928 IC772_RS10020 WP_191014856.1 2154755..2155570(-) (xcpW) [Acinetobacter seifertii strain AS28]
ATGATAAAAAATAAGCACTTTTGCACCCGAAGCAAAGTTTCACGTCTTACGGCACGATCAGGTATTGTGTCGACTGACTG
CTCAGAGCATAGCTCTTCGTCTTACGCTCAGACAAAGCGCTGTTTTAGTGATTCTTACACTCGAAACACTGTTTCTCATC
TTGCGGCGCGATCGAGCAGTGCTCGATTAGCTCGCGCCTCAGGATTTACGTTGGTTGAGTTATTGGTTGCGATTGCTATT
TTCGCGGTTTTATCTTTATTGGGGTGGAAAATATTCGATTATTTGCTCAAGGTTCGTGATCGTAATGCTGAACATGAAGT
GCATTTATTTGAATTACAAGATGCTTATCAACAAATTCTTCGTGATACTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGGCAACTCCATCCAGCTTTAGAAATCGATAATCAAATTTTACGTTTTAGCAAAGCAGGCGTAACTGATCCTTTAAAA
CAGGGTTTGTCACCATTTGAACGAATTGAATATCGTTATGATGCTGATCAAAAAAAACTATATCGTCTTAAATATACAAA
TTTAAATACCTCGAATAACGAGCAACCTTTATCAAGTACCTTGCTAAGTCAAGTTGACCAATATCAGATCATGGTTTTAA
CTCCGCAAGAAGTAACAAAATGGCCCGAAGTTAATATTGATCCAACAAAACCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAAGTTACAGTTGCAGGAGTAAGTTATGAATGGATTTATAGCTTAAATCAAAGCAACTTGGCACTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	93.363	83.395	0.779