Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | KN400_RS08490 | Genome accession | NC_017454 |
| Coordinates | 1606328..1607425 (+) | Length | 365 a.a. |
| NCBI ID | WP_010942138.1 | Uniprot ID | Q74D27 |
| Organism | Geobacter sulfurreducens KN400 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1601328..1612425
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KN400_RS08475 (KN400_1516) | - | 1601694..1603565 (+) | 1872 | WP_010942135.1 | DUF2723 domain-containing protein | - |
| KN400_RS08480 (KN400_1517) | aroE | 1603568..1604428 (+) | 861 | WP_010942136.1 | shikimate dehydrogenase | - |
| KN400_RS08485 (KN400_1518) | pilB | 1604494..1606200 (+) | 1707 | WP_010942137.1 | type IV-A pilus assembly ATPase PilB | - |
| KN400_RS08490 (KN400_1519) | pilT | 1606328..1607425 (+) | 1098 | WP_010942138.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| KN400_RS08495 (KN400_1520) | - | 1607462..1608679 (+) | 1218 | WP_010942139.1 | type II secretion system F family protein | - |
| KN400_RS08500 (KN400_1521) | - | 1608683..1610335 (+) | 1653 | WP_010942140.1 | two-component system sensor histidine kinase NtrB | - |
| KN400_RS08505 (KN400_1522) | - | 1610369..1611745 (+) | 1377 | WP_010942141.1 | sigma-54-dependent transcriptional regulator | - |
| KN400_RS08510 (KN400_1523) | - | 1611965..1612180 (+) | 216 | WP_049786599.1 | type IV pilin protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 40713.12 Da Isoelectric Point: 7.9038
>NTDB_id=47335 KN400_RS08490 WP_010942138.1 1606328..1607425(+) (pilT) [Geobacter sulfurreducens KN400]
MANMHQLLTELVNRGGSDLHITTNSPPQIRVDGQLIPLEMPPLNAVDTKQLCYSILTEQQKHKFEEANELDLSFGIKGLS
RFRGNVFIQRGAVAGVFRVIPYKILTFEELGLPVVVKELAEKPRGLILVTGPTGSGKSTTLAAIIDKINTERHDHIVTIE
DPIEYLHPHKSCVVNQREVGADTKSFKNALKYILRQDPDVVLVGELRDLETIEAALTLAETGHLCLATLHTNSAVQTINR
IVDVFPPYQQPQVRAQLSFVLEGVMSQTLLPNVSGKGRVLALEVMVPNPAIRNLIREDKIHQIYSQMQVGQEKFGMQTMN
QSLFSLLQKRRISLDVAMARSSDPDELKQMLASAQRPPGQRPQMR
MANMHQLLTELVNRGGSDLHITTNSPPQIRVDGQLIPLEMPPLNAVDTKQLCYSILTEQQKHKFEEANELDLSFGIKGLS
RFRGNVFIQRGAVAGVFRVIPYKILTFEELGLPVVVKELAEKPRGLILVTGPTGSGKSTTLAAIIDKINTERHDHIVTIE
DPIEYLHPHKSCVVNQREVGADTKSFKNALKYILRQDPDVVLVGELRDLETIEAALTLAETGHLCLATLHTNSAVQTINR
IVDVFPPYQQPQVRAQLSFVLEGVMSQTLLPNVSGKGRVLALEVMVPNPAIRNLIREDKIHQIYSQMQVGQEKFGMQTMN
QSLFSLLQKRRISLDVAMARSSDPDELKQMLASAQRPPGQRPQMR
Nucleotide
Download Length: 1098 bp
>NTDB_id=47335 KN400_RS08490 WP_010942138.1 1606328..1607425(+) (pilT) [Geobacter sulfurreducens KN400]
ATGGCCAACATGCATCAACTCCTCACGGAACTCGTCAATCGCGGGGGCTCGGACCTTCACATCACCACTAACTCGCCCCC
GCAGATCCGGGTCGACGGCCAGTTGATCCCTCTCGAGATGCCACCGCTCAATGCGGTGGACACCAAGCAGCTCTGCTACA
GCATCCTTACTGAGCAGCAGAAGCACAAATTCGAGGAAGCCAACGAACTCGACCTTTCCTTCGGCATCAAGGGGCTTTCC
CGTTTCCGGGGGAACGTGTTCATTCAGCGGGGCGCAGTTGCCGGCGTGTTCCGGGTGATTCCCTACAAGATTCTCACCTT
TGAAGAGCTGGGTCTGCCGGTGGTGGTGAAAGAGCTGGCGGAGAAGCCTCGGGGGCTGATCCTCGTTACCGGACCCACCG
GCAGCGGCAAGTCGACCACCCTGGCCGCCATCATCGACAAGATCAACACCGAACGGCACGATCATATTGTGACCATCGAG
GATCCCATTGAGTACCTGCATCCTCACAAGAGTTGCGTGGTGAACCAGCGTGAGGTGGGGGCCGATACGAAAAGCTTCAA
GAACGCCTTGAAATATATCCTGCGCCAGGATCCGGACGTGGTCCTCGTGGGGGAGCTCCGGGATCTGGAGACCATCGAGG
CGGCCCTGACCCTTGCCGAGACCGGTCACCTCTGTCTCGCCACGCTCCACACAAACTCGGCGGTGCAGACCATCAACCGG
ATCGTGGACGTATTTCCCCCCTACCAGCAGCCCCAGGTCCGTGCCCAGCTTTCTTTCGTCCTGGAAGGGGTCATGTCCCA
GACCCTGCTGCCGAACGTGTCGGGCAAGGGGAGGGTGCTGGCCCTGGAGGTGATGGTGCCCAATCCGGCCATCCGTAACC
TGATCCGCGAGGACAAGATCCACCAGATCTATTCCCAGATGCAGGTGGGGCAGGAGAAGTTCGGCATGCAGACCATGAAC
CAGTCGCTGTTCAGTCTGTTGCAGAAGAGACGGATTTCGCTTGATGTGGCCATGGCCCGCTCGTCCGATCCCGACGAACT
CAAGCAGATGCTGGCCAGCGCCCAGCGGCCACCGGGTCAGCGCCCTCAGATGAGGTAA
ATGGCCAACATGCATCAACTCCTCACGGAACTCGTCAATCGCGGGGGCTCGGACCTTCACATCACCACTAACTCGCCCCC
GCAGATCCGGGTCGACGGCCAGTTGATCCCTCTCGAGATGCCACCGCTCAATGCGGTGGACACCAAGCAGCTCTGCTACA
GCATCCTTACTGAGCAGCAGAAGCACAAATTCGAGGAAGCCAACGAACTCGACCTTTCCTTCGGCATCAAGGGGCTTTCC
CGTTTCCGGGGGAACGTGTTCATTCAGCGGGGCGCAGTTGCCGGCGTGTTCCGGGTGATTCCCTACAAGATTCTCACCTT
TGAAGAGCTGGGTCTGCCGGTGGTGGTGAAAGAGCTGGCGGAGAAGCCTCGGGGGCTGATCCTCGTTACCGGACCCACCG
GCAGCGGCAAGTCGACCACCCTGGCCGCCATCATCGACAAGATCAACACCGAACGGCACGATCATATTGTGACCATCGAG
GATCCCATTGAGTACCTGCATCCTCACAAGAGTTGCGTGGTGAACCAGCGTGAGGTGGGGGCCGATACGAAAAGCTTCAA
GAACGCCTTGAAATATATCCTGCGCCAGGATCCGGACGTGGTCCTCGTGGGGGAGCTCCGGGATCTGGAGACCATCGAGG
CGGCCCTGACCCTTGCCGAGACCGGTCACCTCTGTCTCGCCACGCTCCACACAAACTCGGCGGTGCAGACCATCAACCGG
ATCGTGGACGTATTTCCCCCCTACCAGCAGCCCCAGGTCCGTGCCCAGCTTTCTTTCGTCCTGGAAGGGGTCATGTCCCA
GACCCTGCTGCCGAACGTGTCGGGCAAGGGGAGGGTGCTGGCCCTGGAGGTGATGGTGCCCAATCCGGCCATCCGTAACC
TGATCCGCGAGGACAAGATCCACCAGATCTATTCCCAGATGCAGGTGGGGCAGGAGAAGTTCGGCATGCAGACCATGAAC
CAGTCGCTGTTCAGTCTGTTGCAGAAGAGACGGATTTCGCTTGATGTGGCCATGGCCCGCTCGTCCGATCCCGACGAACT
CAAGCAGATGCTGGCCAGCGCCCAGCGGCCACCGGGTCAGCGCCCTCAGATGAGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
55.891 |
90.685 |
0.507 |
| pilT | Legionella pneumophila strain Lp02 |
55.891 |
90.685 |
0.507 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.705 |
96.438 |
0.499 |
| pilT | Acinetobacter baylyi ADP1 |
51.014 |
94.521 |
0.482 |
| pilT | Pseudomonas stutzeri DSM 10701 |
51.014 |
94.521 |
0.482 |
| pilT | Pseudomonas aeruginosa PAK |
51.014 |
94.521 |
0.482 |
| pilT | Acinetobacter baumannii D1279779 |
50.435 |
94.521 |
0.477 |
| pilT | Acinetobacter baumannii strain A118 |
50.435 |
94.521 |
0.477 |
| pilT | Acinetobacter nosocomialis M2 |
50.435 |
94.521 |
0.477 |
| pilT | Neisseria meningitidis 8013 |
49.102 |
91.507 |
0.449 |
| pilT | Vibrio cholerae strain A1552 |
49.541 |
89.589 |
0.444 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.541 |
89.589 |
0.444 |
| pilT | Neisseria gonorrhoeae MS11 |
48.048 |
91.233 |
0.438 |
| pilU | Vibrio cholerae strain A1552 |
42.571 |
95.89 |
0.408 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.69 |
97.26 |
0.405 |
| pilU | Acinetobacter baylyi ADP1 |
39.344 |
100 |
0.395 |