Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | KN400_RS03250 | Genome accession | NC_017454 |
| Coordinates | 433541..434611 (+) | Length | 356 a.a. |
| NCBI ID | WP_014551305.1 | Uniprot ID | - |
| Organism | Geobacter sulfurreducens KN400 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 428541..439611
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KN400_RS03240 (KN400_0403) | - | 430700..431704 (-) | 1005 | WP_010941103.1 | hypothetical protein | - |
| KN400_RS03245 (KN400_0404) | - | 431878..433527 (+) | 1650 | WP_010941104.1 | GspE/PulE family protein | - |
| KN400_RS03250 (KN400_0405) | pilT | 433541..434611 (+) | 1071 | WP_014551305.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| KN400_RS03255 (KN400_0406) | - | 434641..435075 (-) | 435 | WP_014551306.1 | hypothetical protein | - |
| KN400_RS03260 (KN400_0407) | - | 435308..435820 (-) | 513 | WP_144011890.1 | hypothetical protein | - |
| KN400_RS03265 (KN400_0408) | - | 435934..436857 (-) | 924 | WP_014551308.1 | HNH endonuclease | - |
| KN400_RS03270 | - | 436835..437272 (-) | 438 | WP_041913994.1 | DNA mismatch endonuclease Vsr | - |
| KN400_RS03275 (KN400_0411) | - | 437191..438477 (-) | 1287 | WP_014551309.1 | DNA cytosine methyltransferase | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39640.82 Da Isoelectric Point: 7.2650
>NTDB_id=47329 KN400_RS03250 WP_014551305.1 433541..434611(+) (pilT) [Geobacter sulfurreducens KN400]
MARIDALFKLLKEQGASDLHLSSGAPPIFRLHGEMARQNFKVLSHEELTAILYEILTDKQKADFEERRDLDFAYAIPGLA
RFRGNYMMTHRGIAAVFRIIPSKILSADDLSLPDGVRRMTQFKKGLVLVTGPTGSGKSTTLAAMIDLINATRKEHILTLE
DPLEFIHENKMSLLNQRQIGEHSLSFSAALRAALREDPDVILVGEMRDLETIGLAMSAAETGHLVFGTLHTNSAAKTIDR
IIDVFPTDQQEQTRAMLSESLKGVVCQQLLKTADGKGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKRDGMQLMDQ
HLLDLFKTKRITAEEAYRCAQDKKQFEQYLAEKPGQ
MARIDALFKLLKEQGASDLHLSSGAPPIFRLHGEMARQNFKVLSHEELTAILYEILTDKQKADFEERRDLDFAYAIPGLA
RFRGNYMMTHRGIAAVFRIIPSKILSADDLSLPDGVRRMTQFKKGLVLVTGPTGSGKSTTLAAMIDLINATRKEHILTLE
DPLEFIHENKMSLLNQRQIGEHSLSFSAALRAALREDPDVILVGEMRDLETIGLAMSAAETGHLVFGTLHTNSAAKTIDR
IIDVFPTDQQEQTRAMLSESLKGVVCQQLLKTADGKGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKRDGMQLMDQ
HLLDLFKTKRITAEEAYRCAQDKKQFEQYLAEKPGQ
Nucleotide
Download Length: 1071 bp
>NTDB_id=47329 KN400_RS03250 WP_014551305.1 433541..434611(+) (pilT) [Geobacter sulfurreducens KN400]
ATGGCACGTATCGACGCACTGTTCAAGCTGCTGAAGGAGCAAGGGGCCTCCGACCTCCACCTGTCGTCCGGGGCTCCGCC
CATTTTCAGGCTTCACGGAGAGATGGCGCGGCAGAACTTCAAGGTTCTTTCCCACGAGGAACTGACGGCCATCCTCTACG
AAATCCTGACCGACAAGCAGAAGGCCGATTTCGAGGAGCGGCGGGACCTGGACTTCGCCTATGCCATTCCCGGCCTGGCC
CGGTTCCGGGGGAACTACATGATGACCCACCGGGGCATCGCCGCGGTCTTCCGGATCATCCCCAGCAAGATCCTCTCGGC
AGACGACCTGAGCCTTCCCGACGGGGTTCGCCGCATGACCCAGTTCAAGAAAGGGCTCGTGCTGGTCACCGGGCCCACGG
GGTCGGGCAAGTCCACCACCCTTGCCGCCATGATCGACCTCATCAACGCCACCCGCAAGGAGCACATCCTCACTCTGGAA
GATCCTCTCGAATTCATCCACGAGAACAAGATGTCGCTCCTGAACCAGCGGCAGATCGGCGAGCACTCCCTGAGTTTTTC
CGCCGCCCTGCGCGCCGCCCTGCGGGAGGACCCCGACGTGATCCTCGTGGGCGAGATGCGGGACCTGGAGACCATAGGCC
TCGCCATGAGCGCAGCCGAGACCGGCCACCTGGTCTTCGGCACCCTCCATACCAACTCGGCGGCCAAGACCATCGACCGG
ATCATCGACGTCTTTCCCACCGATCAGCAGGAGCAGACCCGGGCCATGCTCTCCGAATCTCTCAAAGGGGTCGTCTGTCA
GCAGCTTCTCAAAACCGCCGACGGCAAGGGGCGGGTTGCGGCACTGGAGATCATGCTCGGCACACCGGCCATCGCCAACC
TGATCCGGGAGGGGAAAACCTTCCAGATCCCCTCCATCATCCAGACTGCCAAGCGTGACGGCATGCAGCTCATGGACCAG
CACCTGCTGGACCTCTTCAAGACCAAGCGGATCACCGCCGAAGAGGCCTACCGCTGTGCCCAGGACAAGAAGCAGTTCGA
GCAGTACCTGGCGGAGAAGCCGGGCCAGTAG
ATGGCACGTATCGACGCACTGTTCAAGCTGCTGAAGGAGCAAGGGGCCTCCGACCTCCACCTGTCGTCCGGGGCTCCGCC
CATTTTCAGGCTTCACGGAGAGATGGCGCGGCAGAACTTCAAGGTTCTTTCCCACGAGGAACTGACGGCCATCCTCTACG
AAATCCTGACCGACAAGCAGAAGGCCGATTTCGAGGAGCGGCGGGACCTGGACTTCGCCTATGCCATTCCCGGCCTGGCC
CGGTTCCGGGGGAACTACATGATGACCCACCGGGGCATCGCCGCGGTCTTCCGGATCATCCCCAGCAAGATCCTCTCGGC
AGACGACCTGAGCCTTCCCGACGGGGTTCGCCGCATGACCCAGTTCAAGAAAGGGCTCGTGCTGGTCACCGGGCCCACGG
GGTCGGGCAAGTCCACCACCCTTGCCGCCATGATCGACCTCATCAACGCCACCCGCAAGGAGCACATCCTCACTCTGGAA
GATCCTCTCGAATTCATCCACGAGAACAAGATGTCGCTCCTGAACCAGCGGCAGATCGGCGAGCACTCCCTGAGTTTTTC
CGCCGCCCTGCGCGCCGCCCTGCGGGAGGACCCCGACGTGATCCTCGTGGGCGAGATGCGGGACCTGGAGACCATAGGCC
TCGCCATGAGCGCAGCCGAGACCGGCCACCTGGTCTTCGGCACCCTCCATACCAACTCGGCGGCCAAGACCATCGACCGG
ATCATCGACGTCTTTCCCACCGATCAGCAGGAGCAGACCCGGGCCATGCTCTCCGAATCTCTCAAAGGGGTCGTCTGTCA
GCAGCTTCTCAAAACCGCCGACGGCAAGGGGCGGGTTGCGGCACTGGAGATCATGCTCGGCACACCGGCCATCGCCAACC
TGATCCGGGAGGGGAAAACCTTCCAGATCCCCTCCATCATCCAGACTGCCAAGCGTGACGGCATGCAGCTCATGGACCAG
CACCTGCTGGACCTCTTCAAGACCAAGCGGATCACCGCCGAAGAGGCCTACCGCTGTGCCCAGGACAAGAAGCAGTTCGA
GCAGTACCTGGCGGAGAAGCCGGGCCAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
58.308 |
92.978 |
0.542 |
| pilT | Legionella pneumophila strain Lp02 |
58.308 |
92.978 |
0.542 |
| pilT | Pseudomonas stutzeri DSM 10701 |
56.268 |
96.348 |
0.542 |
| pilT | Pseudomonas aeruginosa PAK |
55.685 |
96.348 |
0.537 |
| pilT | Acinetobacter baylyi ADP1 |
55.394 |
96.348 |
0.534 |
| pilT | Acinetobacter baumannii strain A118 |
54.519 |
96.348 |
0.525 |
| pilT | Acinetobacter nosocomialis M2 |
54.519 |
96.348 |
0.525 |
| pilT | Acinetobacter baumannii D1279779 |
54.519 |
96.348 |
0.525 |
| pilT | Neisseria gonorrhoeae MS11 |
54.678 |
96.067 |
0.525 |
| pilT | Neisseria meningitidis 8013 |
54.678 |
96.067 |
0.525 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.061 |
96.348 |
0.511 |
| pilT | Vibrio cholerae strain A1552 |
53.012 |
93.258 |
0.494 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
53.012 |
93.258 |
0.494 |
| pilU | Vibrio cholerae strain A1552 |
40.294 |
95.506 |
0.385 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.06 |
93.258 |
0.374 |
| pilU | Acinetobacter baylyi ADP1 |
38.806 |
94.101 |
0.365 |