Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | FNFX1_RS08300 | Genome accession | NC_017450 |
| Coordinates | 1737128..1738156 (-) | Length | 342 a.a. |
| NCBI ID | WP_014550254.1 | Uniprot ID | - |
| Organism | Francisella cf. novicida Fx1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1732128..1743156
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNFX1_RS08275 (FNFX1_1660) | - | 1732149..1733030 (-) | 882 | WP_014550250.1 | TIGR01777 family oxidoreductase | - |
| FNFX1_RS08280 (FNFX1_1661) | - | 1733266..1734642 (+) | 1377 | WP_043024584.1 | cytochrome ubiquinol oxidase subunit I | - |
| FNFX1_RS08285 (FNFX1_1662) | - | 1734646..1735608 (+) | 963 | WP_014550252.1 | cytochrome d ubiquinol oxidase subunit II | - |
| FNFX1_RS08290 | - | 1735619..1736065 (+) | 447 | WP_003041217.1 | DUF3429 domain-containing protein | - |
| FNFX1_RS09380 (FNFX1_1663) | - | 1736062..1737048 (+) | 987 | WP_014550253.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FNFX1_RS08300 (FNFX1_1664) | pilT | 1737128..1738156 (-) | 1029 | WP_014550254.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FNFX1_RS08305 (FNFX1_1665) | acnA | 1738251..1741064 (-) | 2814 | WP_003037673.1 | aconitate hydratase AcnA | - |
| FNFX1_RS08310 (FNFX1_1666) | - | 1741169..1742047 (-) | 879 | WP_014550255.1 | Dyp-type peroxidase | - |
| FNFX1_RS08315 | - | 1742117..1742494 (+) | 378 | WP_003017296.1 | GtrA family protein | - |
Sequence
Protein
Download Length: 342 a.a. Molecular weight: 38066.84 Da Isoelectric Point: 7.0987
>NTDB_id=47242 FNFX1_RS08300 WP_014550254.1 1737128..1738156(-) (pilT) [Francisella cf. novicida Fx1]
MIRKLLTLCVQKKASDLHLSSGCKAKYRIDGDLIDIESSPVLNDKMISQMLLEIMTDDQKNELIETYECDFSIDDRDNDA
RFRVNAFFHNRGYGAVFRRLENTIPTLDQFGAPRILKEVQAKKGGLILVTGPTGSGKSSTLAALVNEINHKEDSHILTIE
DPVEFVHTSQRSLVNQREVKRDTKSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVAAYEVLISNTGIRNMIKENKLSQIYTALQTGTAKGMATMEQS
IENLLKAGTITPEEAAKYIVVR
MIRKLLTLCVQKKASDLHLSSGCKAKYRIDGDLIDIESSPVLNDKMISQMLLEIMTDDQKNELIETYECDFSIDDRDNDA
RFRVNAFFHNRGYGAVFRRLENTIPTLDQFGAPRILKEVQAKKGGLILVTGPTGSGKSSTLAALVNEINHKEDSHILTIE
DPVEFVHTSQRSLVNQREVKRDTKSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVAAYEVLISNTGIRNMIKENKLSQIYTALQTGTAKGMATMEQS
IENLLKAGTITPEEAAKYIVVR
Nucleotide
Download Length: 1029 bp
>NTDB_id=47242 FNFX1_RS08300 WP_014550254.1 1737128..1738156(-) (pilT) [Francisella cf. novicida Fx1]
ATGATAAGAAAATTACTAACTCTTTGTGTGCAAAAAAAAGCCTCTGATCTACATTTATCCTCTGGTTGTAAGGCTAAATA
TAGAATAGATGGAGATTTGATTGATATTGAATCTTCACCTGTATTAAATGATAAGATGATTTCTCAGATGCTTTTAGAAA
TCATGACAGATGATCAAAAAAATGAGCTGATAGAAACCTACGAATGCGATTTTTCTATAGATGATAGAGATAATGATGCG
AGATTTAGGGTAAATGCTTTTTTCCATAACCGTGGTTATGGCGCGGTATTTCGTCGTTTAGAGAATACTATTCCAACGTT
AGATCAATTTGGAGCACCAAGAATTCTTAAAGAAGTTCAAGCTAAAAAAGGTGGCTTAATTCTAGTAACAGGACCGACAG
GTTCAGGTAAGAGTAGTACATTGGCAGCATTAGTCAATGAAATAAATCATAAGGAAGATTCTCATATCCTAACTATTGAG
GATCCAGTAGAATTTGTTCATACAAGTCAAAGATCACTAGTAAACCAACGTGAGGTTAAAAGAGATACAAAAAGCTTTAA
TGCGGCTCTTAAATCAGCACTAAGGGAGGATCCTGATTGTATTCTAGTTGGAGAGATGCGTGATTTAGAAACTATTAGAT
TAGCACTAGAGGCAGCTGAAACTGGGCATTTGGTTTTAGGGACATTACATACAATGTCAGCTATAAAAACTGTTGATAGA
GTAATATCTGTATTTCCACCTGCTGAACAGGAGCTTGTACGTAACATGCTTGCGGAATCATTACAAATCGTTATATCTCA
ACGTTTACTTAAACGTAAGGGCGGCGGACGTGTCGCAGCATATGAAGTTCTTATTTCAAATACTGGTATTAGAAATATGA
TTAAAGAAAATAAACTTTCGCAAATTTACACCGCACTACAAACTGGAACAGCTAAGGGAATGGCGACAATGGAACAGAGC
ATTGAGAATCTTCTTAAGGCTGGAACAATTACACCAGAAGAAGCCGCTAAATACATTGTAGTAAGATAA
ATGATAAGAAAATTACTAACTCTTTGTGTGCAAAAAAAAGCCTCTGATCTACATTTATCCTCTGGTTGTAAGGCTAAATA
TAGAATAGATGGAGATTTGATTGATATTGAATCTTCACCTGTATTAAATGATAAGATGATTTCTCAGATGCTTTTAGAAA
TCATGACAGATGATCAAAAAAATGAGCTGATAGAAACCTACGAATGCGATTTTTCTATAGATGATAGAGATAATGATGCG
AGATTTAGGGTAAATGCTTTTTTCCATAACCGTGGTTATGGCGCGGTATTTCGTCGTTTAGAGAATACTATTCCAACGTT
AGATCAATTTGGAGCACCAAGAATTCTTAAAGAAGTTCAAGCTAAAAAAGGTGGCTTAATTCTAGTAACAGGACCGACAG
GTTCAGGTAAGAGTAGTACATTGGCAGCATTAGTCAATGAAATAAATCATAAGGAAGATTCTCATATCCTAACTATTGAG
GATCCAGTAGAATTTGTTCATACAAGTCAAAGATCACTAGTAAACCAACGTGAGGTTAAAAGAGATACAAAAAGCTTTAA
TGCGGCTCTTAAATCAGCACTAAGGGAGGATCCTGATTGTATTCTAGTTGGAGAGATGCGTGATTTAGAAACTATTAGAT
TAGCACTAGAGGCAGCTGAAACTGGGCATTTGGTTTTAGGGACATTACATACAATGTCAGCTATAAAAACTGTTGATAGA
GTAATATCTGTATTTCCACCTGCTGAACAGGAGCTTGTACGTAACATGCTTGCGGAATCATTACAAATCGTTATATCTCA
ACGTTTACTTAAACGTAAGGGCGGCGGACGTGTCGCAGCATATGAAGTTCTTATTTCAAATACTGGTATTAGAAATATGA
TTAAAGAAAATAAACTTTCGCAAATTTACACCGCACTACAAACTGGAACAGCTAAGGGAATGGCGACAATGGAACAGAGC
ATTGAGAATCTTCTTAAGGCTGGAACAATTACACCAGAAGAAGCCGCTAAATACATTGTAGTAAGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii D1279779 |
56.287 |
97.661 |
0.55 |
| pilT | Acinetobacter baumannii strain A118 |
56.287 |
97.661 |
0.55 |
| pilT | Acinetobacter nosocomialis M2 |
56.287 |
97.661 |
0.55 |
| pilT | Legionella pneumophila strain Lp02 |
54.734 |
98.83 |
0.541 |
| pilT | Legionella pneumophila strain ERS1305867 |
54.734 |
98.83 |
0.541 |
| pilT | Neisseria meningitidis 8013 |
54.303 |
98.538 |
0.535 |
| pilT | Neisseria gonorrhoeae MS11 |
54.303 |
98.538 |
0.535 |
| pilT | Pseudomonas aeruginosa PAK |
54.79 |
97.661 |
0.535 |
| pilT | Acinetobacter baylyi ADP1 |
55.319 |
96.199 |
0.532 |
| pilT | Vibrio cholerae strain A1552 |
53.846 |
98.83 |
0.532 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
53.846 |
98.83 |
0.532 |
| pilT | Pseudomonas stutzeri DSM 10701 |
54.192 |
97.661 |
0.529 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.317 |
96.784 |
0.439 |
| pilU | Acinetobacter baylyi ADP1 |
39.403 |
97.953 |
0.386 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.039 |
97.368 |
0.38 |
| pilU | Vibrio cholerae strain A1552 |
39.198 |
94.737 |
0.371 |