Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | FN3523_RS08470 | Genome accession | NC_017449 |
| Coordinates | 1755781..1756809 (-) | Length | 342 a.a. |
| NCBI ID | WP_003035107.1 | Uniprot ID | A0A6I4RYE3 |
| Organism | Francisella hispaniensis | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1750781..1761809
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FN3523_RS08445 (FN3523_1679) | - | 1750809..1751690 (-) | 882 | WP_014548959.1 | TIGR01777 family oxidoreductase | - |
| FN3523_RS08450 (FN3523_1680) | - | 1751917..1753293 (+) | 1377 | WP_044247502.1 | cytochrome ubiquinol oxidase subunit I | - |
| FN3523_RS08455 (FN3523_1681) | - | 1753297..1754259 (+) | 963 | WP_014548961.1 | cytochrome d ubiquinol oxidase subunit II | - |
| FN3523_RS08460 | - | 1754270..1754716 (+) | 447 | WP_044247504.1 | DUF3429 domain-containing protein | - |
| FN3523_RS09540 (FN3523_1682) | - | 1754713..1755696 (+) | 984 | WP_014548962.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FN3523_RS08470 (FN3523_1683) | pilT | 1755781..1756809 (-) | 1029 | WP_003035107.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FN3523_RS08475 (FN3523_1684) | acnA | 1756904..1759717 (-) | 2814 | WP_014548964.1 | aconitate hydratase AcnA | - |
| FN3523_RS08480 (FN3523_1685) | - | 1759822..1760700 (-) | 879 | WP_014548965.1 | Dyp-type peroxidase | - |
| FN3523_RS08485 | - | 1760770..1761147 (+) | 378 | WP_044247506.1 | GtrA family protein | - |
Sequence
Protein
Download Length: 342 a.a. Molecular weight: 38067.83 Da Isoelectric Point: 6.8391
>NTDB_id=47232 FN3523_RS08470 WP_003035107.1 1755781..1756809(-) (pilT) [Francisella hispaniensis]
MIRKLLTLCVQKKASDLHLSSGCKAKYRIDGDLIDIESSPVLNDKMISQMLLEIMTDDQKDELIETYECDFSIDDRDNDA
RFRVNAFFHNRGYGAVFRRLENTIPTLDQFGAPRILKEVQAKKGGLILVTGPTGSGKSSTLAALVNEINHKEDSHILTIE
DPVEFVHTSQRSLVNQREVKRDTKSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVAAYEVLISNTGIRNMIKENKLSQIYTALQTGTAKGMATMEQS
IENLLKAGTITPEEAAKYIVVR
MIRKLLTLCVQKKASDLHLSSGCKAKYRIDGDLIDIESSPVLNDKMISQMLLEIMTDDQKDELIETYECDFSIDDRDNDA
RFRVNAFFHNRGYGAVFRRLENTIPTLDQFGAPRILKEVQAKKGGLILVTGPTGSGKSSTLAALVNEINHKEDSHILTIE
DPVEFVHTSQRSLVNQREVKRDTKSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVAAYEVLISNTGIRNMIKENKLSQIYTALQTGTAKGMATMEQS
IENLLKAGTITPEEAAKYIVVR
Nucleotide
Download Length: 1029 bp
>NTDB_id=47232 FN3523_RS08470 WP_003035107.1 1755781..1756809(-) (pilT) [Francisella hispaniensis]
ATGATAAGAAAATTACTAACTCTTTGTGTGCAAAAAAAAGCCTCTGATTTACATCTATCCTCTGGCTGTAAAGCTAAATA
TAGGATAGATGGAGATTTGATCGACATTGAATCTTCGCCTGTATTAAATGATAAGATGATTTCTCAGATGCTTTTGGAAA
TCATGACAGATGATCAAAAAGATGAGCTGATAGAAACCTACGAATGTGATTTTTCTATAGATGATAGAGATAATGATGCA
AGATTTAGGGTAAATGCTTTTTTCCATAACCGTGGTTATGGCGCGGTATTTCGTCGTTTAGAGAATACTATTCCAACTTT
AGATCAATTTGGAGCACCAAGAATTCTTAAAGAAGTTCAAGCTAAAAAAGGTGGCTTAATTCTAGTAACAGGACCTACAG
GCTCAGGTAAGAGTAGTACATTGGCAGCATTAGTCAATGAGATAAATCATAAGGAAGATTCACATATTCTAACTATTGAA
GATCCAGTAGAATTTGTCCATACAAGTCAAAGATCACTAGTTAACCAGCGTGAGGTTAAAAGAGATACAAAAAGCTTTAA
TGCCGCGCTTAAATCAGCACTAAGGGAGGATCCTGATTGTATCCTTGTTGGAGAGATGCGTGATTTAGAAACTATTAGAT
TAGCTCTAGAGGCAGCTGAAACTGGACATTTGGTTTTAGGGACATTACATACAATGTCAGCTATAAAAACTGTTGATAGG
GTAATATCTGTATTTCCACCTGCTGAGCAGGAGCTTGTGCGTAATATGCTAGCAGAGTCATTACAAATTGTTATATCACA
ACGTTTACTTAAACGTAAGGGTGGTGGGCGTGTTGCAGCATATGAAGTTCTTATTTCAAATACTGGTATTAGAAATATGA
TTAAAGAAAATAAACTTTCGCAAATTTATACCGCACTACAAACTGGAACAGCTAAGGGAATGGCGACAATGGAACAGAGC
ATTGAGAATCTGCTTAAGGCTGGAACAATTACACCAGAAGAAGCCGCTAAATACATTGTAGTAAGGTAA
ATGATAAGAAAATTACTAACTCTTTGTGTGCAAAAAAAAGCCTCTGATTTACATCTATCCTCTGGCTGTAAAGCTAAATA
TAGGATAGATGGAGATTTGATCGACATTGAATCTTCGCCTGTATTAAATGATAAGATGATTTCTCAGATGCTTTTGGAAA
TCATGACAGATGATCAAAAAGATGAGCTGATAGAAACCTACGAATGTGATTTTTCTATAGATGATAGAGATAATGATGCA
AGATTTAGGGTAAATGCTTTTTTCCATAACCGTGGTTATGGCGCGGTATTTCGTCGTTTAGAGAATACTATTCCAACTTT
AGATCAATTTGGAGCACCAAGAATTCTTAAAGAAGTTCAAGCTAAAAAAGGTGGCTTAATTCTAGTAACAGGACCTACAG
GCTCAGGTAAGAGTAGTACATTGGCAGCATTAGTCAATGAGATAAATCATAAGGAAGATTCACATATTCTAACTATTGAA
GATCCAGTAGAATTTGTCCATACAAGTCAAAGATCACTAGTTAACCAGCGTGAGGTTAAAAGAGATACAAAAAGCTTTAA
TGCCGCGCTTAAATCAGCACTAAGGGAGGATCCTGATTGTATCCTTGTTGGAGAGATGCGTGATTTAGAAACTATTAGAT
TAGCTCTAGAGGCAGCTGAAACTGGACATTTGGTTTTAGGGACATTACATACAATGTCAGCTATAAAAACTGTTGATAGG
GTAATATCTGTATTTCCACCTGCTGAGCAGGAGCTTGTGCGTAATATGCTAGCAGAGTCATTACAAATTGTTATATCACA
ACGTTTACTTAAACGTAAGGGTGGTGGGCGTGTTGCAGCATATGAAGTTCTTATTTCAAATACTGGTATTAGAAATATGA
TTAAAGAAAATAAACTTTCGCAAATTTATACCGCACTACAAACTGGAACAGCTAAGGGAATGGCGACAATGGAACAGAGC
ATTGAGAATCTGCTTAAGGCTGGAACAATTACACCAGAAGAAGCCGCTAAATACATTGTAGTAAGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii D1279779 |
56.287 |
97.661 |
0.55 |
| pilT | Acinetobacter baumannii strain A118 |
56.287 |
97.661 |
0.55 |
| pilT | Acinetobacter nosocomialis M2 |
56.287 |
97.661 |
0.55 |
| pilT | Legionella pneumophila strain Lp02 |
54.734 |
98.83 |
0.541 |
| pilT | Legionella pneumophila strain ERS1305867 |
54.734 |
98.83 |
0.541 |
| pilT | Neisseria meningitidis 8013 |
54.303 |
98.538 |
0.535 |
| pilT | Neisseria gonorrhoeae MS11 |
54.303 |
98.538 |
0.535 |
| pilT | Pseudomonas aeruginosa PAK |
54.79 |
97.661 |
0.535 |
| pilT | Acinetobacter baylyi ADP1 |
55.319 |
96.199 |
0.532 |
| pilT | Vibrio cholerae strain A1552 |
53.846 |
98.83 |
0.532 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
53.846 |
98.83 |
0.532 |
| pilT | Pseudomonas stutzeri DSM 10701 |
54.192 |
97.661 |
0.529 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.317 |
96.784 |
0.439 |
| pilU | Acinetobacter baylyi ADP1 |
39.403 |
97.953 |
0.386 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.039 |
97.368 |
0.38 |
| pilU | Vibrio cholerae strain A1552 |
39.198 |
94.737 |
0.371 |