Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | H0H24_RS17770 | Genome accession | NZ_CP059729 |
| Coordinates | 3738713..3739750 (-) | Length | 345 a.a. |
| NCBI ID | WP_000355489.1 | Uniprot ID | A0A009PTR1 |
| Organism | Acinetobacter baumannii strain AbCTX13 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3715100..3801583 | 3738713..3739750 | within | 0 |
Gene organization within MGE regions
Location: 3715100..3801583
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0H24_RS17650 (H0H24_17625) | - | 3715129..3715944 (-) | 816 | WP_024432392.1 | arginyltransferase | - |
| H0H24_RS17655 (H0H24_17630) | aat | 3715963..3716694 (-) | 732 | WP_000854785.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| H0H24_RS17660 (H0H24_17635) | trxB | 3716814..3717761 (-) | 948 | WP_001276144.1 | thioredoxin-disulfide reductase | - |
| H0H24_RS17665 (H0H24_17640) | - | 3718031..3721063 (+) | 3033 | WP_000127827.1 | DNA translocase FtsK | - |
| H0H24_RS17670 (H0H24_17645) | rhtC | 3721212..3721832 (+) | 621 | WP_000959259.1 | threonine export protein RhtC | - |
| H0H24_RS17675 (H0H24_17650) | - | 3721875..3722162 (-) | 288 | WP_001218560.1 | PA4642 family protein | - |
| H0H24_RS17680 (H0H24_17655) | minE | 3722246..3722518 (-) | 273 | WP_000896934.1 | cell division topological specificity factor MinE | - |
| H0H24_RS17685 (H0H24_17660) | minD | 3722521..3723333 (-) | 813 | WP_001074362.1 | septum site-determining protein MinD | - |
| H0H24_RS17690 (H0H24_17665) | minC | 3723404..3724126 (-) | 723 | WP_000763675.1 | septum site-determining protein MinC | - |
| H0H24_RS17695 (H0H24_17670) | - | 3724248..3725294 (-) | 1047 | WP_001181638.1 | hypothetical protein | - |
| H0H24_RS17700 (H0H24_17675) | - | 3725310..3726236 (-) | 927 | WP_000100973.1 | acyltransferase | - |
| H0H24_RS17705 (H0H24_17680) | - | 3726481..3727134 (+) | 654 | WP_001202415.1 | OmpA family protein | - |
| H0H24_RS17710 (H0H24_17685) | rep | 3727328..3729367 (+) | 2040 | WP_000093035.1 | DNA helicase Rep | - |
| H0H24_RS17715 (H0H24_17690) | dut | 3729391..3729843 (+) | 453 | WP_000868152.1 | dUTP diphosphatase | - |
| H0H24_RS17720 (H0H24_17695) | - | 3730043..3731461 (+) | 1419 | WP_001102845.1 | phosphomannomutase/phosphoglucomutase | - |
| H0H24_RS17725 (H0H24_17700) | argB | 3731476..3732384 (+) | 909 | WP_001135419.1 | acetylglutamate kinase | - |
| H0H24_RS17730 (H0H24_17705) | - | 3732505..3733287 (+) | 783 | WP_000890284.1 | GNAT family N-acetyltransferase | - |
| H0H24_RS17735 (H0H24_17710) | - | 3733396..3734244 (+) | 849 | WP_000336554.1 | class II glutamine amidotransferase | - |
| H0H24_RS17740 (H0H24_17715) | - | 3734497..3734952 (+) | 456 | WP_000782976.1 | bacteriohemerythrin | - |
| H0H24_RS17745 (H0H24_17720) | - | 3735105..3736172 (+) | 1068 | WP_029776981.1 | membrane protein | - |
| H0H24_RS17750 (H0H24_17725) | - | 3736172..3736495 (+) | 324 | WP_000442585.1 | RnfH family protein | - |
| H0H24_RS17755 (H0H24_17730) | - | 3736550..3736948 (-) | 399 | WP_001170994.1 | outer membrane protein assembly factor BamE | - |
| H0H24_RS17760 (H0H24_17735) | fur | 3737060..3737497 (+) | 438 | WP_001122847.1 | ferric iron uptake transcriptional regulator | - |
| H0H24_RS17765 (H0H24_17740) | pilU | 3737567..3738685 (-) | 1119 | WP_000347036.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| H0H24_RS17770 (H0H24_17745) | pilT | 3738713..3739750 (-) | 1038 | WP_000355489.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| H0H24_RS17775 (H0H24_17750) | - | 3739877..3740569 (+) | 693 | WP_024432389.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| H0H24_RS17780 (H0H24_17755) | - | 3740770..3744366 (-) | 3597 | WP_000698797.1 | AAA family ATPase | - |
| H0H24_RS17785 (H0H24_17760) | - | 3744376..3745644 (-) | 1269 | WP_032061991.1 | exonuclease SbcCD subunit D | - |
| H0H24_RS17790 (H0H24_17765) | - | 3745808..3746281 (+) | 474 | WP_000974354.1 | OsmC family protein | - |
| H0H24_RS17795 (H0H24_17770) | - | 3746355..3746732 (-) | 378 | WP_001091956.1 | VOC family protein | - |
| H0H24_RS17800 (H0H24_17775) | - | 3747112..3747564 (+) | 453 | WP_000164152.1 | ABZJ_00895 family protein | - |
| H0H24_RS17805 (H0H24_17780) | - | 3747654..3748559 (+) | 906 | WP_001039349.1 | TIGR01777 family oxidoreductase | - |
| H0H24_RS17810 (H0H24_17785) | - | 3748551..3749666 (-) | 1116 | WP_000546678.1 | FAD-binding oxidoreductase | - |
| H0H24_RS17815 (H0H24_17790) | hemB | 3749692..3750705 (-) | 1014 | WP_004748084.1 | porphobilinogen synthase | - |
| H0H24_RS17820 (H0H24_17795) | - | 3750848..3751345 (+) | 498 | WP_010590410.1 | thioesterase family protein | - |
| H0H24_RS17825 (H0H24_17800) | - | 3751615..3752766 (+) | 1152 | WP_000128703.1 | EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit | - |
| H0H24_RS17830 (H0H24_17805) | - | 3752773..3754296 (+) | 1524 | WP_000857095.1 | DHA2 family efflux MFS transporter permease subunit | - |
| H0H24_RS17835 (H0H24_17810) | ggt | 3754600..3756585 (+) | 1986 | WP_001042935.1 | gamma-glutamyltransferase | - |
| H0H24_RS17845 (H0H24_17820) | - | 3757288..3758517 (+) | 1230 | WP_032071232.1 | tyrosine-type recombinase/integrase | - |
| H0H24_RS17850 (H0H24_17825) | - | 3758667..3759293 (+) | 627 | WP_000151566.1 | hypothetical protein | - |
| H0H24_RS17855 (H0H24_17830) | - | 3759421..3759636 (+) | 216 | WP_000153154.1 | hypothetical protein | - |
| H0H24_RS17860 (H0H24_17835) | - | 3759639..3759848 (+) | 210 | WP_001016479.1 | helix-turn-helix domain-containing protein | - |
| H0H24_RS17865 (H0H24_17840) | - | 3759845..3760399 (+) | 555 | WP_002003158.1 | BRO family protein | - |
| H0H24_RS17870 (H0H24_17845) | - | 3760392..3760757 (+) | 366 | WP_001046482.1 | hypothetical protein | - |
| H0H24_RS19875 | - | 3760770..3761072 (+) | 303 | WP_000787402.1 | hypothetical protein | - |
| H0H24_RS17875 (H0H24_17850) | - | 3761187..3761465 (+) | 279 | WP_001064707.1 | hypothetical protein | - |
| H0H24_RS17880 (H0H24_17855) | - | 3761477..3763909 (+) | 2433 | Protein_3510 | DUF927 domain-containing protein | - |
| H0H24_RS17885 (H0H24_17860) | - | 3764242..3764445 (+) | 204 | WP_001984265.1 | single-stranded DNA-binding protein | - |
| H0H24_RS17890 (H0H24_17865) | - | 3764582..3766024 (+) | 1443 | WP_000003532.1 | hypothetical protein | - |
| H0H24_RS17895 (H0H24_17870) | - | 3766367..3767041 (+) | 675 | WP_000560650.1 | DUF3800 domain-containing protein | - |
| H0H24_RS17900 (H0H24_17875) | - | 3767041..3767229 (+) | 189 | WP_000642900.1 | hypothetical protein | - |
| H0H24_RS17905 (H0H24_17880) | - | 3767285..3767950 (+) | 666 | WP_000515964.1 | hypothetical protein | - |
| H0H24_RS17915 (H0H24_17890) | - | 3768924..3769970 (+) | 1047 | WP_000027065.1 | nucleoid-associated protein | - |
| H0H24_RS17920 (H0H24_17895) | - | 3769973..3771178 (+) | 1206 | WP_024432374.1 | hypothetical protein | - |
| H0H24_RS17925 (H0H24_17900) | tnpC | 3771333..3772892 (-) | 1560 | Protein_3518 | IS66 family transposase | - |
| H0H24_RS17930 (H0H24_17905) | tnpB | 3773023..3773298 (-) | 276 | WP_203463190.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| H0H24_RS17935 (H0H24_17910) | - | 3773295..3773676 (-) | 382 | Protein_3520 | transposase | - |
| H0H24_RS17940 (H0H24_17915) | tnpC | 3775557..3777115 (-) | 1559 | Protein_3521 | IS66 family transposase | - |
| H0H24_RS17945 (H0H24_17920) | tnpB | 3777244..3777516 (-) | 273 | WP_203463191.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| H0H24_RS19880 | - | 3777513..3777895 (-) | 383 | Protein_3523 | transposase | - |
| H0H24_RS17955 (H0H24_17930) | - | 3778012..3779559 (+) | 1548 | WP_000124669.1 | class I SAM-dependent DNA methyltransferase | - |
| H0H24_RS17960 (H0H24_17935) | - | 3779556..3780701 (+) | 1146 | WP_000637753.1 | restriction endonuclease subunit S | - |
| H0H24_RS17965 (H0H24_17940) | - | 3780752..3781291 (+) | 540 | WP_225480425.1 | DUF2939 domain-containing protein | - |
| H0H24_RS17970 (H0H24_17945) | - | 3781593..3784862 (+) | 3270 | WP_024432358.1 | type I restriction endonuclease subunit R | - |
| H0H24_RS17975 (H0H24_17950) | - | 3785348..3786820 (-) | 1473 | WP_000626990.1 | N-6 DNA methylase | - |
| H0H24_RS17980 (H0H24_17955) | - | 3786804..3787409 (-) | 606 | WP_000477039.1 | restriction endonuclease subunit S | - |
| H0H24_RS17985 (H0H24_17960) | - | 3787429..3787611 (-) | 183 | WP_000797544.1 | hypothetical protein | - |
| H0H24_RS17990 (H0H24_17965) | - | 3787967..3788881 (+) | 915 | WP_024432357.1 | GIY-YIG nuclease family protein | - |
| H0H24_RS17995 (H0H24_17970) | - | 3789150..3789434 (-) | 285 | WP_000675260.1 | hypothetical protein | - |
| H0H24_RS18000 (H0H24_17975) | - | 3790072..3791418 (-) | 1347 | WP_024432356.1 | OprD family outer membrane porin | - |
| H0H24_RS18005 (H0H24_17980) | - | 3791497..3792882 (-) | 1386 | WP_000182789.1 | MFS transporter | - |
| H0H24_RS18010 (H0H24_17985) | - | 3793055..3793999 (-) | 945 | WP_000050872.1 | dihydrodipicolinate synthase family protein | - |
| H0H24_RS18015 (H0H24_17990) | - | 3794186..3795076 (+) | 891 | WP_001105541.1 | LysR family transcriptional regulator | - |
| H0H24_RS18020 (H0H24_17995) | - | 3795213..3795734 (+) | 522 | WP_003653184.1 | sigma-70 family RNA polymerase sigma factor | - |
| H0H24_RS18025 (H0H24_18000) | - | 3795735..3796751 (+) | 1017 | WP_001240510.1 | FecR domain-containing protein | - |
| H0H24_RS18030 (H0H24_18005) | - | 3796891..3800064 (+) | 3174 | WP_004736030.1 | TonB-dependent receptor domain-containing protein | - |
| H0H24_RS18035 (H0H24_18010) | - | 3800255..3801046 (+) | 792 | WP_002004304.1 | Slam-dependent surface lipoprotein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38312.92 Da Isoelectric Point: 6.7271
>NTDB_id=471623 H0H24_RS17770 WP_000355489.1 3738713..3739750(-) (pilT) [Acinetobacter baumannii strain AbCTX13]
MDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRLVYDIMNDKQRRDYEEKLETDFSFEVPNVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGQIFKDICDYPRGIVLVTGPTGSGKSTTLAAMLDYINENRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANHGMTTLDQSL
KGLVARGVISPQTARTAAKQPESFL
MDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRLVYDIMNDKQRRDYEEKLETDFSFEVPNVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGQIFKDICDYPRGIVLVTGPTGSGKSTTLAAMLDYINENRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANHGMTTLDQSL
KGLVARGVISPQTARTAAKQPESFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=471623 H0H24_RS17770 WP_000355489.1 3738713..3739750(-) (pilT) [Acinetobacter baumannii strain AbCTX13]
ATGGATATTACAGAGCTACTCGCCTTCTCTGTGAAAAATGGCGCGTCCGATTTACATCTCTCTGCTGGCATGCCACCAAT
GATTCGTGTTGACGGTGAAGTTCGTCGTATTAACTTACCAGCCTTAGAACATAAAGATGTCCACCGTCTTGTTTACGACA
TCATGAATGATAAACAGCGCCGTGACTATGAAGAAAAACTCGAAACTGACTTTTCTTTTGAAGTACCTAATGTTGCGCGT
TTCCGTGTTAACGCATTTAACCAAAACCGTGGTGCTGGTGCAGTATTTCGTACCATTCCATCTAAAGTCCTCACCATGGA
AGATCTAGGTCTAGGACAAATCTTTAAAGATATTTGCGACTATCCTCGTGGCATTGTACTGGTGACAGGACCAACAGGTT
CGGGTAAATCAACTACGCTTGCAGCGATGCTCGATTATATTAACGAAAACCGCTATGACCATATTTTAACGGTGGAAGAT
CCAATCGAATTTGTACATCAATCTAAGAAATGTCTCATTAACCAGCGTGAAGTGCATCGTGACACACACGGCTTTAATGA
AGCACTTCGCTCAGCACTGCGTGAAGACCCTGATATTATTTTGGTCGGTGAGATGCGTGACCTTGAAACTATTCGCTTGG
CATTAACCGCTGCCGAAACAGGTCACTTGGTGTTTGGTACACTCCACACCACGTCGGCAGCAAAAACTATTGACCGTGTG
ATTGACGTATTCCCTGCCGAAGAAAAAGACATGGTTCGTGCCATGCTATCAGAATCTTTACAAGCGGTTATTTCACAAAC
CCTGCTTAAAAAGAATGGTGGTGGCCGTGTCGCAGCACATGAGATCATGATTGGTATTCCGGCTATTCGTAACTTAATTC
GTGAAAACAAAGTCGCGCAAATGTACTCAGCCATTCAAACTGGTGCCAATCATGGCATGACTACCCTCGACCAAAGTTTA
AAAGGCTTAGTCGCTCGCGGTGTGATTAGTCCACAAACCGCACGTACTGCGGCAAAACAGCCTGAATCATTCTTATAA
ATGGATATTACAGAGCTACTCGCCTTCTCTGTGAAAAATGGCGCGTCCGATTTACATCTCTCTGCTGGCATGCCACCAAT
GATTCGTGTTGACGGTGAAGTTCGTCGTATTAACTTACCAGCCTTAGAACATAAAGATGTCCACCGTCTTGTTTACGACA
TCATGAATGATAAACAGCGCCGTGACTATGAAGAAAAACTCGAAACTGACTTTTCTTTTGAAGTACCTAATGTTGCGCGT
TTCCGTGTTAACGCATTTAACCAAAACCGTGGTGCTGGTGCAGTATTTCGTACCATTCCATCTAAAGTCCTCACCATGGA
AGATCTAGGTCTAGGACAAATCTTTAAAGATATTTGCGACTATCCTCGTGGCATTGTACTGGTGACAGGACCAACAGGTT
CGGGTAAATCAACTACGCTTGCAGCGATGCTCGATTATATTAACGAAAACCGCTATGACCATATTTTAACGGTGGAAGAT
CCAATCGAATTTGTACATCAATCTAAGAAATGTCTCATTAACCAGCGTGAAGTGCATCGTGACACACACGGCTTTAATGA
AGCACTTCGCTCAGCACTGCGTGAAGACCCTGATATTATTTTGGTCGGTGAGATGCGTGACCTTGAAACTATTCGCTTGG
CATTAACCGCTGCCGAAACAGGTCACTTGGTGTTTGGTACACTCCACACCACGTCGGCAGCAAAAACTATTGACCGTGTG
ATTGACGTATTCCCTGCCGAAGAAAAAGACATGGTTCGTGCCATGCTATCAGAATCTTTACAAGCGGTTATTTCACAAAC
CCTGCTTAAAAAGAATGGTGGTGGCCGTGTCGCAGCACATGAGATCATGATTGGTATTCCGGCTATTCGTAACTTAATTC
GTGAAAACAAAGTCGCGCAAATGTACTCAGCCATTCAAACTGGTGCCAATCATGGCATGACTACCCTCGACCAAAGTTTA
AAAGGCTTAGTCGCTCGCGGTGTGATTAGTCCACAAACCGCACGTACTGCGGCAAAACAGCCTGAATCATTCTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |
| pilT | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| pilT | Acinetobacter nosocomialis M2 |
99.71 |
100 |
0.997 |
| pilT | Acinetobacter baylyi ADP1 |
88.953 |
99.71 |
0.887 |
| pilT | Pseudomonas aeruginosa PAK |
84.302 |
99.71 |
0.841 |
| pilT | Pseudomonas stutzeri DSM 10701 |
84.012 |
99.71 |
0.838 |
| pilT | Legionella pneumophila strain Lp02 |
75.581 |
99.71 |
0.754 |
| pilT | Legionella pneumophila strain ERS1305867 |
75.581 |
99.71 |
0.754 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
71.726 |
97.391 |
0.699 |
| pilT | Vibrio cholerae strain A1552 |
71.726 |
97.391 |
0.699 |
| pilT | Neisseria meningitidis 8013 |
68.116 |
100 |
0.681 |
| pilT | Neisseria gonorrhoeae MS11 |
67.826 |
100 |
0.678 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.174 |
100 |
0.522 |
| pilU | Vibrio cholerae strain A1552 |
41.593 |
98.261 |
0.409 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.597 |
97.101 |
0.394 |
| pilU | Acinetobacter baylyi ADP1 |
38.728 |
100 |
0.388 |