Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | HBNCFIEN_RS03240 | Genome accession | NZ_CP059576 |
| Coordinates | 782850..783956 (+) | Length | 368 a.a. |
| NCBI ID | WP_182392654.1 | Uniprot ID | A0A7G4RDL5 |
| Organism | Legionella sp. PC997 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 777850..788956
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBNCFIEN_RS03220 (HBNCFIEN_00649) | - | 778055..778936 (-) | 882 | WP_182392651.1 | polyprenyl synthetase family protein | - |
| HBNCFIEN_RS03225 (HBNCFIEN_00650) | - | 778926..779147 (-) | 222 | WP_182392652.1 | exodeoxyribonuclease VII small subunit | - |
| HBNCFIEN_RS03230 (HBNCFIEN_00651) | radA | 779344..780693 (+) | 1350 | WP_182392653.1 | DNA repair protein RadA | - |
| HBNCFIEN_RS03235 (HBNCFIEN_00652) | - | 780854..782785 (+) | 1932 | WP_255464320.1 | L-gulono-gamma-lactone oxidase | - |
| HBNCFIEN_RS03240 (HBNCFIEN_00653) | pilU | 782850..783956 (+) | 1107 | WP_182392654.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| HBNCFIEN_RS03245 (HBNCFIEN_00654) | ankK | 784011..785933 (+) | 1923 | WP_182392655.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
| HBNCFIEN_RS03250 (HBNCFIEN_00655) | - | 785996..786301 (-) | 306 | WP_182392656.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 41088.22 Da Isoelectric Point: 5.2898
>NTDB_id=470895 HBNCFIEN_RS03240 WP_182392654.1 782850..783956(+) (pilU) [Legionella sp. PC997]
MDITPFFKLMVDRGASDLFFSVGAPPNIKIEGVISPVGQVPLKSQQMAEIALSLMSDDQRKEFESTLELNMALSIASVGR
FRINMFRQRGDISMVVRYIKNKIPSLEQLNLPLILKSIVMELRGLVLVVGATGSGKSTTLASMIDYRNENQSGHILTIED
PIEFIHQHKKSIVDQREVGIDTMSYDNALVNAMREAPDVILIGEIRERNAMKHAIAYAETGHLCISTLHANNANQAMDRI
VNFFPEDARKQVLMDLSLNLRSIISMRLIPGVNNQRMAAVELLLNTPYVSDLIEKGKIDDIKEAMERSTEQGMQTFDQAL
LKLYRSGAISQENAIKYADSKNNVGLQIRLNSSGDFDSQNDTLTIDEN
MDITPFFKLMVDRGASDLFFSVGAPPNIKIEGVISPVGQVPLKSQQMAEIALSLMSDDQRKEFESTLELNMALSIASVGR
FRINMFRQRGDISMVVRYIKNKIPSLEQLNLPLILKSIVMELRGLVLVVGATGSGKSTTLASMIDYRNENQSGHILTIED
PIEFIHQHKKSIVDQREVGIDTMSYDNALVNAMREAPDVILIGEIRERNAMKHAIAYAETGHLCISTLHANNANQAMDRI
VNFFPEDARKQVLMDLSLNLRSIISMRLIPGVNNQRMAAVELLLNTPYVSDLIEKGKIDDIKEAMERSTEQGMQTFDQAL
LKLYRSGAISQENAIKYADSKNNVGLQIRLNSSGDFDSQNDTLTIDEN
Nucleotide
Download Length: 1107 bp
>NTDB_id=470895 HBNCFIEN_RS03240 WP_182392654.1 782850..783956(+) (pilU) [Legionella sp. PC997]
ATGGACATTACTCCTTTTTTTAAATTGATGGTTGATCGCGGTGCTTCAGACTTATTTTTCAGTGTAGGGGCGCCACCTAA
TATTAAAATTGAAGGGGTAATTTCTCCTGTAGGCCAAGTACCACTCAAATCCCAACAAATGGCTGAAATCGCATTATCGT
TGATGAGCGATGATCAGCGTAAAGAATTCGAGTCTACTTTAGAACTGAATATGGCACTCTCCATTGCCTCGGTCGGGCGT
TTCAGAATTAATATGTTTCGCCAGCGTGGAGACATCTCGATGGTGGTGCGTTATATTAAGAATAAGATTCCTTCACTGGA
ACAATTAAATTTACCTCTGATTTTAAAATCGATTGTTATGGAGTTACGCGGACTGGTTTTAGTGGTAGGTGCTACCGGTT
CGGGTAAGTCAACCACCTTGGCATCAATGATTGATTATCGCAATGAAAATCAAAGTGGGCATATTTTAACCATTGAAGAC
CCAATCGAATTTATTCATCAACATAAAAAATCAATAGTCGATCAACGTGAAGTAGGTATTGATACGATGAGTTATGATAA
TGCGTTAGTCAATGCAATGCGTGAAGCCCCGGATGTGATTTTAATTGGTGAGATTCGTGAGCGCAATGCTATGAAGCATG
CTATTGCTTATGCAGAAACAGGACATTTATGTATTTCGACACTTCATGCCAATAATGCAAACCAGGCTATGGATCGAATT
GTCAATTTTTTCCCCGAAGACGCCCGAAAACAGGTATTGATGGATTTGTCACTTAACTTACGGTCTATTATTTCCATGCG
CCTTATTCCTGGTGTGAATAATCAGCGCATGGCCGCTGTAGAATTATTATTAAATACACCTTATGTTTCTGATTTGATCG
AGAAAGGAAAAATTGATGATATTAAAGAGGCAATGGAACGCAGCACCGAACAGGGCATGCAGACATTCGATCAGGCTCTA
TTAAAATTGTACCGCAGCGGAGCCATTTCCCAAGAAAATGCAATTAAGTATGCTGATTCCAAAAATAATGTGGGTTTGCA
AATCCGTTTAAACAGCAGCGGAGATTTTGATTCTCAAAATGATACTTTAACCATTGATGAGAATTGA
ATGGACATTACTCCTTTTTTTAAATTGATGGTTGATCGCGGTGCTTCAGACTTATTTTTCAGTGTAGGGGCGCCACCTAA
TATTAAAATTGAAGGGGTAATTTCTCCTGTAGGCCAAGTACCACTCAAATCCCAACAAATGGCTGAAATCGCATTATCGT
TGATGAGCGATGATCAGCGTAAAGAATTCGAGTCTACTTTAGAACTGAATATGGCACTCTCCATTGCCTCGGTCGGGCGT
TTCAGAATTAATATGTTTCGCCAGCGTGGAGACATCTCGATGGTGGTGCGTTATATTAAGAATAAGATTCCTTCACTGGA
ACAATTAAATTTACCTCTGATTTTAAAATCGATTGTTATGGAGTTACGCGGACTGGTTTTAGTGGTAGGTGCTACCGGTT
CGGGTAAGTCAACCACCTTGGCATCAATGATTGATTATCGCAATGAAAATCAAAGTGGGCATATTTTAACCATTGAAGAC
CCAATCGAATTTATTCATCAACATAAAAAATCAATAGTCGATCAACGTGAAGTAGGTATTGATACGATGAGTTATGATAA
TGCGTTAGTCAATGCAATGCGTGAAGCCCCGGATGTGATTTTAATTGGTGAGATTCGTGAGCGCAATGCTATGAAGCATG
CTATTGCTTATGCAGAAACAGGACATTTATGTATTTCGACACTTCATGCCAATAATGCAAACCAGGCTATGGATCGAATT
GTCAATTTTTTCCCCGAAGACGCCCGAAAACAGGTATTGATGGATTTGTCACTTAACTTACGGTCTATTATTTCCATGCG
CCTTATTCCTGGTGTGAATAATCAGCGCATGGCCGCTGTAGAATTATTATTAAATACACCTTATGTTTCTGATTTGATCG
AGAAAGGAAAAATTGATGATATTAAAGAGGCAATGGAACGCAGCACCGAACAGGGCATGCAGACATTCGATCAGGCTCTA
TTAAAATTGTACCGCAGCGGAGCCATTTCCCAAGAAAATGCAATTAAGTATGCTGATTCCAAAAATAATGTGGGTTTGCA
AATCCGTTTAAACAGCAGCGGAGATTTTGATTCTCAAAATGATACTTTAACCATTGATGAGAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
53.933 |
96.739 |
0.522 |
| pilU | Acinetobacter baylyi ADP1 |
52.941 |
97.011 |
0.514 |
| pilU | Vibrio cholerae strain A1552 |
47.075 |
97.554 |
0.459 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.068 |
92.12 |
0.397 |
| pilT | Pseudomonas aeruginosa PAK |
42.274 |
93.207 |
0.394 |
| pilT | Neisseria meningitidis 8013 |
42.183 |
92.12 |
0.389 |
| pilT | Neisseria gonorrhoeae MS11 |
42.183 |
92.12 |
0.389 |
| pilT | Legionella pneumophila strain ERS1305867 |
41.228 |
92.935 |
0.383 |
| pilT | Legionella pneumophila strain Lp02 |
41.228 |
92.935 |
0.383 |
| pilT | Pseudomonas stutzeri DSM 10701 |
40.525 |
93.207 |
0.378 |
| pilT | Acinetobacter baumannii strain A118 |
41.018 |
90.761 |
0.372 |
| pilT | Acinetobacter nosocomialis M2 |
41.018 |
90.761 |
0.372 |
| pilT | Acinetobacter baumannii D1279779 |
41.018 |
90.761 |
0.372 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.641 |
89.402 |
0.372 |
| pilT | Vibrio cholerae strain A1552 |
41.641 |
89.402 |
0.372 |
| pilT | Acinetobacter baylyi ADP1 |
39.118 |
92.391 |
0.361 |