Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | FOLKNPGA_RS03185 | Genome accession | NZ_CP059400 |
| Coordinates | 739086..740192 (+) | Length | 368 a.a. |
| NCBI ID | WP_182351720.1 | Uniprot ID | - |
| Organism | Legionella sp. PC1000 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 734086..745192
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOLKNPGA_RS03170 (FOLKNPGA_00649) | - | 734872..735078 (-) | 207 | WP_182351718.1 | exodeoxyribonuclease VII small subunit | - |
| FOLKNPGA_RS03175 (FOLKNPGA_00650) | radA | 735347..736696 (+) | 1350 | WP_182351719.1 | DNA repair protein RadA | - |
| FOLKNPGA_RS03180 (FOLKNPGA_00651) | - | 736870..738804 (+) | 1935 | WP_182352743.1 | FAD-binding protein | - |
| FOLKNPGA_RS03185 (FOLKNPGA_00652) | pilU | 739086..740192 (+) | 1107 | WP_182351720.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| FOLKNPGA_RS03190 (FOLKNPGA_00653) | ankK | 740247..742157 (+) | 1911 | WP_182351721.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
| FOLKNPGA_RS03195 (FOLKNPGA_00654) | - | 742518..742823 (-) | 306 | WP_182351722.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 41013.16 Da Isoelectric Point: 5.2868
>NTDB_id=469368 FOLKNPGA_RS03185 WP_182351720.1 739086..740192(+) (pilU) [Legionella sp. PC1000]
MDITPFFKLMVDRGASDLFFSVGAPPNIKIEGVISPVGHAPLKAQQMAEIALSLMSDDQRKEFEATLELNMGLSISGVGR
FRINLFRQRGDISMVVRYIQNKIPSIEQLNLPPLLKSIVMELRGLVLVVGSTGSGKSTTLAAMIDYRNENQSGHILTIED
PIEFIHQHKKSIVDQREVGIDTMSYDNALINAMREAPDVILIGEIRERNSMKHAIAYAETGHLCISTLHANNANQAMDRV
INFFPEDARKQILMDLSLNLRAIISMRLIPGLNTQRIAAVELLLNTPYISDLIEKGKIDDIKEAMERSTEQGMQTFDQAL
LKLYRSGLISKENAIKYADSKNNVGLQIRLNSSADFDSQDDNLTIEGD
MDITPFFKLMVDRGASDLFFSVGAPPNIKIEGVISPVGHAPLKAQQMAEIALSLMSDDQRKEFEATLELNMGLSISGVGR
FRINLFRQRGDISMVVRYIQNKIPSIEQLNLPPLLKSIVMELRGLVLVVGSTGSGKSTTLAAMIDYRNENQSGHILTIED
PIEFIHQHKKSIVDQREVGIDTMSYDNALINAMREAPDVILIGEIRERNSMKHAIAYAETGHLCISTLHANNANQAMDRV
INFFPEDARKQILMDLSLNLRAIISMRLIPGLNTQRIAAVELLLNTPYISDLIEKGKIDDIKEAMERSTEQGMQTFDQAL
LKLYRSGLISKENAIKYADSKNNVGLQIRLNSSADFDSQDDNLTIEGD
Nucleotide
Download Length: 1107 bp
>NTDB_id=469368 FOLKNPGA_RS03185 WP_182351720.1 739086..740192(+) (pilU) [Legionella sp. PC1000]
ATGGACATAACTCCTTTTTTTAAATTAATGGTAGATCGCGGTGCTTCCGACTTATTTTTTAGTGTGGGAGCACCGCCTAA
TATTAAAATCGAAGGAGTTATTTCACCTGTAGGGCATGCTCCGCTCAAAGCACAGCAAATGGCTGAAATTGCTTTATCGC
TAATGAGTGATGATCAGCGTAAAGAATTTGAGGCTACTTTGGAACTTAATATGGGGCTTTCTATTTCCGGAGTTGGGCGT
TTTAGAATTAACTTATTTCGCCAACGCGGTGATATCTCCATGGTTGTGCGTTATATCCAGAACAAGATTCCCTCGATTGA
GCAATTAAATTTACCTCCACTTTTAAAATCGATTGTCATGGAGTTGCGCGGCCTGGTTTTAGTAGTAGGTTCCACGGGAT
CAGGAAAGTCAACCACCTTGGCAGCAATGATTGATTACCGTAATGAAAATCAAAGCGGACATATTTTAACAATTGAAGAC
CCCATAGAATTTATTCATCAACATAAAAAATCCATAGTGGATCAACGTGAAGTGGGCATTGATACAATGAGCTATGATAA
TGCATTAATCAATGCAATGCGCGAAGCCCCAGATGTGATTCTAATCGGTGAGATTCGCGAACGTAACTCCATGAAACATG
CCATTGCCTATGCAGAAACTGGACATTTATGTATTTCAACGCTGCATGCTAATAATGCGAATCAGGCTATGGACCGGGTT
ATTAATTTTTTCCCTGAAGATGCACGAAAGCAAATATTGATGGATCTGTCGCTTAATTTGCGAGCTATTATTTCAATGCG
CCTCATTCCAGGCTTAAATACGCAACGCATCGCAGCCGTAGAGTTGTTACTTAATACACCCTATATTTCTGATTTGATTG
AAAAAGGAAAAATTGATGACATTAAAGAAGCCATGGAACGAAGTACGGAGCAAGGCATGCAAACTTTTGATCAGGCTTTA
TTAAAATTATATCGAAGTGGATTAATTTCCAAGGAAAATGCTATTAAATATGCTGATTCAAAAAATAATGTTGGTTTGCA
AATTCGGTTAAATAGCAGCGCAGACTTTGACTCACAAGATGATAATCTGACTATAGAAGGAGATTGA
ATGGACATAACTCCTTTTTTTAAATTAATGGTAGATCGCGGTGCTTCCGACTTATTTTTTAGTGTGGGAGCACCGCCTAA
TATTAAAATCGAAGGAGTTATTTCACCTGTAGGGCATGCTCCGCTCAAAGCACAGCAAATGGCTGAAATTGCTTTATCGC
TAATGAGTGATGATCAGCGTAAAGAATTTGAGGCTACTTTGGAACTTAATATGGGGCTTTCTATTTCCGGAGTTGGGCGT
TTTAGAATTAACTTATTTCGCCAACGCGGTGATATCTCCATGGTTGTGCGTTATATCCAGAACAAGATTCCCTCGATTGA
GCAATTAAATTTACCTCCACTTTTAAAATCGATTGTCATGGAGTTGCGCGGCCTGGTTTTAGTAGTAGGTTCCACGGGAT
CAGGAAAGTCAACCACCTTGGCAGCAATGATTGATTACCGTAATGAAAATCAAAGCGGACATATTTTAACAATTGAAGAC
CCCATAGAATTTATTCATCAACATAAAAAATCCATAGTGGATCAACGTGAAGTGGGCATTGATACAATGAGCTATGATAA
TGCATTAATCAATGCAATGCGCGAAGCCCCAGATGTGATTCTAATCGGTGAGATTCGCGAACGTAACTCCATGAAACATG
CCATTGCCTATGCAGAAACTGGACATTTATGTATTTCAACGCTGCATGCTAATAATGCGAATCAGGCTATGGACCGGGTT
ATTAATTTTTTCCCTGAAGATGCACGAAAGCAAATATTGATGGATCTGTCGCTTAATTTGCGAGCTATTATTTCAATGCG
CCTCATTCCAGGCTTAAATACGCAACGCATCGCAGCCGTAGAGTTGTTACTTAATACACCCTATATTTCTGATTTGATTG
AAAAAGGAAAAATTGATGACATTAAAGAAGCCATGGAACGAAGTACGGAGCAAGGCATGCAAACTTTTGATCAGGCTTTA
TTAAAATTATATCGAAGTGGATTAATTTCCAAGGAAAATGCTATTAAATATGCTGATTCAAAAAATAATGTTGGTTTGCA
AATTCGGTTAAATAGCAGCGCAGACTTTGACTCACAAGATGATAATCTGACTATAGAAGGAGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
53.243 |
100 |
0.535 |
| pilU | Acinetobacter baylyi ADP1 |
52.941 |
97.011 |
0.514 |
| pilU | Vibrio cholerae strain A1552 |
47.075 |
97.554 |
0.459 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.363 |
92.12 |
0.399 |
| pilT | Pseudomonas aeruginosa PAK |
42.857 |
93.207 |
0.399 |
| pilT | Legionella pneumophila strain Lp02 |
41.813 |
92.935 |
0.389 |
| pilT | Legionella pneumophila strain ERS1305867 |
41.813 |
92.935 |
0.389 |
| pilT | Pseudomonas stutzeri DSM 10701 |
41.399 |
93.207 |
0.386 |
| pilT | Neisseria meningitidis 8013 |
40.346 |
94.293 |
0.38 |
| pilT | Neisseria gonorrhoeae MS11 |
40.346 |
94.293 |
0.38 |
| pilT | Acinetobacter baumannii strain A118 |
41.916 |
90.761 |
0.38 |
| pilT | Acinetobacter nosocomialis M2 |
41.916 |
90.761 |
0.38 |
| pilT | Acinetobacter baumannii D1279779 |
41.916 |
90.761 |
0.38 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.964 |
90.217 |
0.37 |
| pilT | Vibrio cholerae strain A1552 |
40.964 |
90.217 |
0.37 |
| pilT | Acinetobacter baylyi ADP1 |
39.118 |
92.391 |
0.361 |