Detailed information    

insolico Bioinformatically predicted

Overview

Name   rexB   Type   Machinery gene
Locus tag   I6J12_RS02085 Genome accession   NZ_CP068060
Coordinates   430209..433481 (+) Length   1090 a.a.
NCBI ID   WP_003037196.1    Uniprot ID   I0SB28
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 425209..438481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS02055 (I6J12_02055) - 425511..426377 (+) 867 WP_003037452.1 ABC transporter permease -
  I6J12_RS02060 (I6J12_02060) - 426374..427132 (+) 759 WP_003037298.1 ABC transporter ATP-binding protein -
  I6J12_RS02065 (I6J12_02065) - 427148..427489 (-) 342 WP_025271884.1 hypothetical protein -
  I6J12_RS02070 (I6J12_02070) - 427577..427789 (+) 213 WP_003037473.1 YdbC family protein -
  I6J12_RS02075 (I6J12_02075) - 427985..428878 (+) 894 WP_003037226.1 ABC transporter ATP-binding protein -
  I6J12_RS02080 (I6J12_02080) - 428875..430089 (+) 1215 WP_003037373.1 ABC transporter permease -
  I6J12_RS02085 (I6J12_02085) rexB 430209..433481 (+) 3273 WP_003037196.1 ATP-dependent nuclease subunit B Machinery gene
  I6J12_RS02090 (I6J12_02090) rexA 433478..437158 (+) 3681 WP_003037370.1 helicase-exonuclease AddAB subunit AddA Machinery gene

Sequence

Protein


Download         Length: 1090 a.a.        Molecular weight: 125105.01 Da        Isoelectric Point: 5.1876

>NTDB_id=458778 I6J12_RS02085 WP_003037196.1 430209..433481(+) (rexB) [Streptococcus anginosus strain FDAARGOS_1155]
MKLLYTDIRNPLTKILVKEAERLAQAGKRVFYIAPNSLSFEKERAVLSLLENHASFAITVTRFAQMARYFVLNDVQQGKP
LDDIGLGMLFYKVLSEMEEHDLQVYGGIRTDAQFIQQLVELYHELQEAKMTVADLDSLDEAEKKADLINILQLVTHQLNQ
SEFTSESNIMVFANHIIAGDVDAELQNLVLVIDGFTRFSAEEAYLIELLHSKGVEIVIGAYASEKAYRASFREGNLYQAS
VDFLRHLADEYKVKPEYRPAIQPDDAFGNISKLLESRYDFSDVELELTEQDRSHVQIWSAVNQKEELEYVAKSIRQRVHD
GARYKDIRVLLGDVEVYRLQLKTIFDQYQIPFYLGRSEAMAHHPLVQFIEALVRLKHYNFRTEDLLNLLKTGLYGHLKQE
ELDLFEQYIRFADVKGASKFAKDFTHNQRHKFDLVQINRLRKKIVSPLLEFFKSRSQTATGLLQKFHQFLTTTSLSQNFT
VLVDSTNLQDQERQEEVWKAFCHVLEQFASVFSASKVKLDDFLTLVQSGMLLSNYRTIPATVDVVTVQSYDLIEPLSSPF
VYAVGLTQDYFPKIVQNKSLLSDEDRLRLNEATDEHSELLIVAQENLQKNRFVVLSLLNAATDRLVLSTPQIVNEIENNI
SPYLLELHEQPIGLPIEVKRPQATSDDIGTYRALLARVIELNQGDIDRDRFLTEKEQTFWSVAVRVLRKKLESEGISIPN
VTSSLETETLSTQTLQALYPPHQAFLLSTSALTEFYRNQYAYFLKYILALQEEMTIHPDARSHGNFLHRVFEKVMQEQSS
EPFDNRLEKAIQEASQEAEFEALYTENSEALFAHEVLLDTARATGHVLERNDLVETIQEEAVFGQEETNVLTLSDGRNLQ
IRGKVDRIDRLKIDGSLGVVDYKSSDTNFDFQKFFNGLNSQLPTYLAALKQESWMNEEAHAFGAMYLQMTNPLVPLAKTK
SQGDAVKEAMKNLEYKGLFLSEQARQLNGLYDKKKVNLLSQEELETLLAYNALLYRRAAEQILAGHFYINPYTENGKSIA
PFVEQYKSITGFEANLHLSSARHLVKLDSHPTGEKKRQAWIEKMKEELEK

Nucleotide


Download         Length: 3273 bp        

>NTDB_id=458778 I6J12_RS02085 WP_003037196.1 430209..433481(+) (rexB) [Streptococcus anginosus strain FDAARGOS_1155]
ATGAAATTACTTTATACTGATATTCGCAATCCCTTAACGAAGATTTTGGTGAAAGAAGCAGAGCGCTTGGCACAAGCAGG
CAAGCGCGTGTTTTATATTGCCCCCAACTCTCTTTCATTTGAAAAAGAGAGGGCTGTTTTGAGTCTTTTAGAAAACCACG
CTTCGTTTGCTATTACAGTGACACGTTTTGCGCAGATGGCGCGTTATTTTGTCCTCAATGATGTGCAGCAAGGCAAACCA
TTAGATGATATTGGTTTGGGAATGCTCTTTTACAAGGTCTTATCTGAAATGGAAGAGCATGATTTGCAGGTGTACGGTGG
CATTCGGACGGATGCGCAGTTTATTCAGCAATTGGTTGAACTCTATCATGAGTTGCAAGAAGCTAAAATGACTGTTGCAG
ACTTGGACTCTCTGGATGAAGCCGAGAAAAAAGCAGATTTAATCAACATTTTACAGTTAGTAACGCATCAGCTAAATCAG
AGTGAATTTACTTCTGAGTCAAATATCATGGTCTTTGCTAATCATATTATAGCAGGTGACGTGGATGCGGAACTGCAGAA
TTTGGTCTTGGTGATTGATGGCTTTACGCGCTTTTCTGCTGAGGAGGCCTATTTGATCGAGCTTTTGCATAGCAAGGGCG
TAGAAATCGTCATCGGTGCTTATGCAAGTGAAAAAGCTTATCGTGCAAGTTTTCGAGAGGGCAATCTGTATCAGGCCAGC
GTAGATTTTTTGCGTCATTTGGCAGATGAATATAAGGTAAAACCTGAATATAGACCTGCAATACAGCCAGATGATGCTTT
TGGCAACATTTCAAAACTGCTAGAAAGCCGCTATGATTTCTCAGATGTTGAGCTGGAGCTGACGGAGCAAGATCGTTCGC
ATGTACAGATTTGGTCAGCAGTCAATCAAAAGGAAGAATTGGAGTATGTGGCGAAGAGCATTCGCCAGCGAGTTCATGAC
GGTGCCCGCTACAAAGATATTCGTGTTCTTTTGGGAGATGTAGAAGTCTATCGTTTGCAGTTAAAGACGATTTTTGATCA
GTATCAAATCCCTTTTTATCTGGGACGAAGTGAGGCTATGGCCCATCACCCTTTGGTGCAATTTATTGAAGCTTTAGTGC
GCCTAAAACACTACAATTTTCGAACGGAAGATTTGCTCAATCTCTTAAAAACAGGTCTTTATGGTCATTTAAAGCAAGAA
GAGTTAGACTTGTTTGAGCAATATATCCGTTTTGCAGATGTAAAAGGAGCCAGCAAATTTGCCAAGGATTTCACTCACAA
TCAACGTCATAAGTTTGATTTAGTTCAAATCAATCGTTTGAGGAAGAAGATAGTGTCTCCTTTGTTAGAGTTTTTCAAAT
CTCGTAGTCAAACTGCGACAGGTTTGCTTCAAAAATTTCATCAATTTTTAACGACAACTTCTCTTTCTCAGAATTTTACT
GTTTTGGTAGATTCTACGAACCTGCAAGACCAAGAAAGACAAGAAGAAGTCTGGAAGGCTTTTTGTCATGTTTTGGAACA
ATTTGCCAGTGTCTTTTCAGCCAGCAAGGTCAAGCTAGATGATTTTCTGACTCTGGTGCAGTCAGGAATGCTGTTATCCA
ATTATCGGACTATTCCAGCAACGGTGGACGTTGTGACCGTTCAATCTTATGATTTGATTGAGCCCTTGTCAAGTCCTTTT
GTCTATGCTGTTGGTTTGACCCAAGACTATTTTCCAAAAATTGTGCAAAACAAAAGCCTCTTGTCAGATGAAGACCGATT
ACGATTAAATGAAGCGACTGATGAGCATTCGGAGTTGCTGATTGTTGCTCAGGAAAATCTCCAGAAAAATCGTTTTGTGG
TCTTATCGCTTCTGAATGCTGCGACGGATAGATTGGTGCTTTCTACTCCTCAGATTGTCAATGAAATAGAGAACAACATT
TCTCCATATTTGTTAGAATTGCATGAACAACCAATTGGACTGCCGATTGAAGTGAAGCGTCCGCAGGCAACAAGTGATGA
TATTGGAACTTATCGAGCTCTGTTGGCGAGGGTTATTGAGTTGAATCAAGGGGATATTGATCGAGATCGCTTTTTGACGG
AGAAGGAACAGACTTTTTGGTCAGTCGCCGTACGGGTTTTGCGCAAAAAATTGGAAAGCGAAGGTATTTCGATTCCTAAT
GTAACGTCAAGCCTTGAAACAGAAACCTTGTCAACGCAGACATTGCAAGCTCTTTATCCGCCTCATCAGGCATTTCTACT
GTCGACTTCAGCTTTGACAGAATTCTACCGCAATCAATATGCTTATTTTTTGAAGTATATCTTGGCTTTGCAGGAAGAAA
TGACGATTCATCCAGATGCGCGCAGTCATGGAAATTTCCTGCATCGTGTGTTTGAAAAAGTCATGCAAGAGCAGTCTAGT
GAGCCATTTGATAATCGCCTAGAAAAAGCCATTCAAGAAGCGAGTCAGGAAGCGGAATTTGAAGCTCTTTATACAGAAAA
TTCAGAAGCCTTGTTTGCTCACGAAGTTTTGCTGGACACCGCGCGTGCGACAGGGCATGTTCTAGAAAGAAATGATTTAG
TAGAAACCATTCAAGAAGAAGCTGTTTTCGGTCAAGAAGAAACAAATGTTCTAACCTTGTCAGACGGACGCAACCTTCAA
ATTCGAGGGAAAGTTGACCGGATTGACCGTTTGAAGATAGATGGCAGTCTAGGCGTTGTTGACTATAAATCAAGCGATAC
GAATTTTGATTTTCAGAAATTTTTCAATGGCTTAAATTCTCAATTACCTACCTATCTAGCAGCTTTGAAACAAGAGTCGT
GGATGAATGAAGAAGCGCATGCTTTTGGTGCTATGTATCTGCAGATGACCAATCCACTTGTGCCTTTAGCCAAGACGAAG
TCGCAAGGCGACGCTGTCAAAGAAGCAATGAAGAACCTAGAATACAAAGGTCTGTTCTTGTCTGAGCAGGCTCGTCAGCT
GAATGGTTTGTATGATAAAAAGAAAGTGAATCTGTTGAGTCAAGAGGAATTGGAGACATTGTTGGCTTATAATGCACTCT
TGTATCGCCGTGCTGCTGAGCAGATTTTGGCAGGGCATTTTTACATCAATCCTTATACGGAGAATGGCAAAAGTATTGCA
CCTTTTGTGGAGCAGTACAAGTCCATTACGGGATTTGAAGCGAATCTTCATCTCTCTAGCGCCCGCCATTTGGTTAAGTT
AGATAGTCACCCGACAGGTGAAAAGAAGCGTCAAGCATGGATAGAAAAGATGAAGGAGGAGCTAGAAAAATGA

Domains

Predicted by InterProScan.

PD-(D/E)XK nuclease superfamily (PDDEXK_1)

(747-1033)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SB28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexB Streptococcus pneumoniae R6

55.818

100

0.563