Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6J14_RS03530 Genome accession   NZ_CP068057
Coordinates   729524..731269 (-) Length   581 a.a.
NCBI ID   WP_115252810.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 724524..736269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS03515 (I6J14_03515) - 725612..726022 (-) 411 WP_003050301.1 peptide deformylase -
  I6J14_RS03520 (I6J14_03520) gdhA 726147..727496 (-) 1350 WP_003050296.1 NADP-specific glutamate dehydrogenase -
  I6J14_RS03525 (I6J14_03525) rcrQ 727752..729524 (-) 1773 WP_003050294.1 ABC transporter ATP-binding protein Regulator
  I6J14_RS03530 (I6J14_03530) rcrP 729524..731269 (-) 1746 WP_115252810.1 ABC transporter ATP-binding protein Regulator
  I6J14_RS03535 (I6J14_03535) - 731377..733254 (-) 1878 WP_115252809.1 ABC-F family ATP-binding cassette domain-containing protein -
  I6J14_RS03540 (I6J14_03540) - 733251..734459 (-) 1209 WP_003050286.1 CCA tRNA nucleotidyltransferase -
  I6J14_RS03545 (I6J14_03545) - 734580..735428 (-) 849 WP_003050283.1 DegV family protein -
  I6J14_RS03550 (I6J14_03550) - 735428..735808 (-) 381 WP_003050280.1 DUF1149 family protein -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65225.88 Da        Isoelectric Point: 5.7754

>NTDB_id=458664 I6J14_RS03530 WP_115252810.1 729524..731269(-) (rcrP) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MGLIWSYLSSKPKWLALDILGGLLFVLVNLGLPTILARMIDHGIMQQDTEALYGWTLVMFVIIVLGALGRIILSYASGKL
TTTMIKELRNDMYRQLQDYSHTEYEKIGVASLVTRMTSDAFVLMQFAEMSLRLGVVTPLMMIFSVLMIFLTSPSLVWIVA
VSMPFLVLVVVYVAVKTRPLSEKQQESLDHINQLVRENLTGLRVIRAFSREAFQQERFDERNQEYASISKRLFTLTGLTE
PLFVQIIIAMIVAIVWFALDPLAKGQIQIGDLVAFIEYSFHALFSFLMFANLFTMYPKMAISSKRIKEVMDMPISISKNE
DGVTETLTKGYLEFDNVTFAYPGETESPVLHNISFKTKPGETIAFIGSTGSGKSSLVNLIPRFYDVTFGRILVDGVDVRD
YQLKSLRAKIGFIPQKALLFTGTIEDNLKYGKADASYWELDEATDVSQARAFIASREKGYQTHLAEAGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYQTDAALRKRLKEVTEDATVLIVAQRVGTIMDADQIIVLDQGEIVGRGKHEELMATNA
IYREIADSQLNKGNLMEKEVD

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=458664 I6J14_RS03530 WP_115252810.1 729524..731269(-) (rcrP) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGGGGCTGATTTGGTCGTATTTATCATCAAAGCCTAAGTGGTTGGCTTTGGACATTTTAGGTGGCCTATTATTTGTCCT
GGTTAATTTAGGATTACCCACTATTTTAGCTCGAATGATAGACCATGGAATCATGCAGCAGGATACCGAAGCCTTATATG
GCTGGACGTTGGTCATGTTTGTCATTATTGTGTTAGGTGCTCTTGGTCGAATTATCTTATCCTACGCATCTGGTAAGCTA
ACGACAACCATGATCAAGGAGTTGCGCAATGACATGTATCGTCAGTTGCAGGATTACTCTCATACAGAATATGAAAAAAT
TGGGGTTGCTTCTTTGGTTACCCGAATGACAAGTGATGCCTTTGTGCTCATGCAGTTTGCTGAAATGTCTTTACGATTAG
GAGTAGTGACGCCCTTAATGATGATTTTTTCAGTGCTGATGATTTTCTTGACAAGTCCATCGTTAGTATGGATTGTAGCG
GTATCCATGCCTTTTTTGGTGCTGGTTGTTGTTTATGTTGCCGTCAAAACAAGGCCTCTCTCTGAAAAACAACAAGAAAG
TTTAGACCACATTAATCAGTTAGTCAGAGAAAATTTGACTGGCTTGCGCGTGATTAGAGCCTTTTCGAGAGAAGCGTTTC
AGCAGGAACGTTTTGATGAGCGTAATCAAGAATACGCCAGTATTTCTAAACGTCTCTTCACCCTAACAGGATTGACAGAA
CCGCTATTTGTGCAAATCATTATTGCCATGATTGTAGCCATTGTTTGGTTTGCCTTAGACCCTTTGGCTAAGGGACAAAT
TCAAATTGGGGATTTGGTAGCCTTTATCGAGTATAGTTTTCATGCTCTTTTTTCGTTTTTGATGTTTGCTAATCTCTTTA
CCATGTATCCTAAAATGGCAATTTCCAGCAAACGGATCAAAGAAGTCATGGACATGCCAATCTCTATTTCTAAAAATGAA
GATGGGGTAACAGAGACCTTGACAAAAGGTTACCTCGAATTTGACAATGTCACCTTTGCCTATCCTGGAGAAACAGAAAG
TCCTGTTCTACATAACATTTCTTTTAAAACCAAGCCTGGTGAAACCATCGCTTTTATTGGCTCAACAGGGTCAGGAAAAT
CATCCTTGGTGAATTTAATTCCTCGATTTTACGACGTGACGTTTGGGAGAATCTTGGTCGATGGGGTAGATGTCAGAGAT
TATCAGTTAAAATCTCTTCGTGCTAAAATTGGTTTCATCCCACAGAAAGCTCTGCTATTTACAGGAACTATCGAAGACAA
TTTAAAATATGGTAAGGCAGATGCTAGCTATTGGGAATTAGATGAAGCTACGGATGTATCTCAAGCTAGAGCATTTATTG
CTAGCCGCGAAAAAGGCTATCAGACCCATCTAGCAGAAGCAGGAAGCAATTTATCAGGTGGTCAGAAGCAACGGCTATCC
ATTGCCCGTGCGGTTGTTAAAAAACCCGATATTTATATCTTCGATGATTCTTTTTCGGCACTAGATTACCAAACCGATGC
TGCTTTAAGGAAGCGCCTGAAAGAAGTAACAGAGGATGCGACTGTTTTGATTGTAGCTCAACGGGTTGGGACTATCATGG
ATGCCGATCAAATCATTGTTCTAGATCAAGGTGAAATTGTCGGTCGAGGCAAGCATGAGGAATTGATGGCAACCAATGCT
ATTTACCGTGAAATTGCTGATTCGCAATTAAACAAAGGAAATCTCATGGAAAAGGAGGTGGACTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(26-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.775

91.738

0.365