Detailed information NTG0455877

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: I5P61_RS04705
• Genome accession: NZ_CP066743
• Coordinates: 955494..956474 (+)
• Length: 326 a.a.
• NCBI ID: WP_001335651.1
• Uniprot ID: -
• Organism: Escherichia coli strain UPEC 536
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Genomic Context

Location: 950494..961474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5P61_RS04675 (I5P61_00918)	yggM	951099..952106 (+)	1008	WP_000745232.1	DUF1202 family protein	-
I5P61_RS04680 (I5P61_00919)	hemW	952171..953307 (-)	1137	WP_000239951.1	radical SAM family heme chaperone HemW	-
I5P61_RS04685 (I5P61_00920)	rdgB	953300..953893 (-)	594	WP_001174738.1	XTP/dITP diphosphatase	-
I5P61_RS04690 (I5P61_00921)	yggU	953901..954191 (-)	291	WP_001277222.1	DUF167 family protein YggU	-
I5P61_RS04695 (I5P61_00922)	yggT	954188..954754 (-)	567	WP_001094831.1	osmotic shock tolerance protein YggT	-
I5P61_RS04700 (I5P61_00923)	yggS	954772..955476 (-)	705	WP_000997804.1	pyridoxal phosphate homeostasis protein	-
I5P61_RS04705 (I5P61_00924)	pilT	955494..956474 (+)	981	WP_001335651.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
I5P61_RS04710 (I5P61_00925)	ruvX	956648..957064 (-)	417	WP_000017106.1	Holliday junction resolvase RuvX	-
I5P61_RS04715 (I5P61_00926)	yqgE	957064..957627 (-)	564	WP_001053178.1	YqgE/AlgH family protein	-
I5P61_RS04720 (I5P61_00927)	gshB	957736..958686 (-)	951	WP_000593259.1	glutathione synthase	-
I5P61_RS04725 (I5P61_00928)	rsmE	958699..959430 (-)	732	WP_001222509.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
I5P61_RS04730 (I5P61_00929)	endA	959510..960217 (-)	708	WP_001298248.1	deoxyribonuclease I	-
I5P61_RS04735 (I5P61_00930)	yggI	960312..960809 (-)	498	WP_032140833.1	SprT family zinc-dependent metalloprotease	-

Sequence

Protein

• Length: 326 a.a.
• Molecular weight: 36073.30 Da
• Isoelectric Point: 5.7980

>NTDB_id=455877 I5P61_RS04705 WP_001335651.1 955494..956474(+) (pilT) [Escherichia coli strain UPEC 536]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLWEWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYTSQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQR
VKEGRL

Nucleotide

• Length: 981 bp

>NTDB_id=455877 I5P61_RS04705 WP_001335651.1 955494..956474(+) (pilT) [Escherichia coli strain UPEC 536]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGTATTCGCGGGAGAATGGAAGCTGCGCCGTTTGACGCGCCGGACGTCGAAGAGCTACTGTGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGATTGCGCGGC
AGTGCGTTCGCACAACGGCAAGGTATTTCTCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATACCAGTCAGCGATGTTTGATCCAACAGCGGGAGATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCTGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGATAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCGACATTACACACGCGCGGCGCAGCGCAGGCAGTTGAGCGACTGGTGGATTCG
TTTCCGGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTACTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGAAAGAAGGGCGCTTGTGA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (63-239)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Vibrio cholerae strain A1552	49.541	100	0.497
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	49.541	100	0.497
pilT	Neisseria meningitidis 8013	48.78	100	0.491
pilT	Neisseria gonorrhoeae MS11	48.476	100	0.488
pilT	Acinetobacter baylyi ADP1	46.789	100	0.469
pilT	Acinetobacter baumannii D1279779	46.483	100	0.466
pilT	Acinetobacter nosocomialis M2	46.483	100	0.466
pilT	Acinetobacter baumannii strain A118	46.483	100	0.466
pilT	Pseudomonas stutzeri DSM 10701	46.483	100	0.466
pilT	Pseudomonas aeruginosa PAK	46.177	100	0.463
pilT	Legionella pneumophila strain ERS1305867	45.26	100	0.454
pilT	Legionella pneumophila strain Lp02	45.26	100	0.454
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.138	97.546	0.411
pilU	Vibrio cholerae strain A1552	40.694	97.239	0.396
pilU	Pseudomonas stutzeri DSM 10701	37.576	100	0.38
pilU	Acinetobacter baylyi ADP1	36.957	98.773	0.365