Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PM3016_RS33195 | Genome accession | NC_016935 |
| Coordinates | 7984920..7985966 (-) | Length | 348 a.a. |
| NCBI ID | WP_014372413.1 | Uniprot ID | - |
| Organism | Paenibacillus mucilaginosus 3016 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 7979920..7990966
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PM3016_RS33170 (PM3016_6780) | - | 7980029..7980718 (-) | 690 | WP_014372408.1 | hypothetical protein | - |
| PM3016_RS33175 (PM3016_6781) | pilM | 7980699..7982357 (-) | 1659 | WP_014372409.1 | pilus assembly protein PilM | - |
| PM3016_RS33180 (PM3016_6782) | - | 7982373..7983140 (-) | 768 | WP_014372410.1 | prepilin peptidase | - |
| PM3016_RS33185 (PM3016_6783) | - | 7983206..7983661 (-) | 456 | WP_014372411.1 | type II secretion system protein | - |
| PM3016_RS33190 (PM3016_6784) | - | 7983715..7984920 (-) | 1206 | WP_014372412.1 | type II secretion system F family protein | - |
| PM3016_RS33195 (PM3016_6785) | pilT | 7984920..7985966 (-) | 1047 | WP_014372413.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PM3016_RS33200 (PM3016_6786) | - | 7985985..7987652 (-) | 1668 | WP_013920866.1 | GspE/PulE family protein | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 37697.23 Da Isoelectric Point: 7.4132
>NTDB_id=44109 PM3016_RS33195 WP_014372413.1 7984920..7985966(-) (pilT) [Paenibacillus mucilaginosus 3016]
MSNLHTFNELLRTAHERGASDLHITAGAPPVLRVHGSLLSLEGSLLSAEDTSGMVLAVMTPDQAERFGRTGEVDFSYEVE
GLSRYRVNAYRQRGKVSLAARTIPAKIPTLEELRLPPAVQSLAQRPHGLVLVTGPTGSGKSSTLAALINHINKTQRKHIV
TLEDPIEFLHAHGSSVINQREVGSDTRSFADGLRAVLRQDPDVILVGEMRDLETITAAVTAAETGHLVFATLHTTDAPQT
IDRIVDAFPAHQQGQIRIQLAAVLVGVVSQRLLPKPRGEGRTCVTEIMMNTPAVANLIRTEKVHQIKSVMQTGRLQGMHT
MDMAIKELLQQGLVDPLAAKAYLQEGGA
MSNLHTFNELLRTAHERGASDLHITAGAPPVLRVHGSLLSLEGSLLSAEDTSGMVLAVMTPDQAERFGRTGEVDFSYEVE
GLSRYRVNAYRQRGKVSLAARTIPAKIPTLEELRLPPAVQSLAQRPHGLVLVTGPTGSGKSSTLAALINHINKTQRKHIV
TLEDPIEFLHAHGSSVINQREVGSDTRSFADGLRAVLRQDPDVILVGEMRDLETITAAVTAAETGHLVFATLHTTDAPQT
IDRIVDAFPAHQQGQIRIQLAAVLVGVVSQRLLPKPRGEGRTCVTEIMMNTPAVANLIRTEKVHQIKSVMQTGRLQGMHT
MDMAIKELLQQGLVDPLAAKAYLQEGGA
Nucleotide
Download Length: 1047 bp
>NTDB_id=44109 PM3016_RS33195 WP_014372413.1 7984920..7985966(-) (pilT) [Paenibacillus mucilaginosus 3016]
ATGTCTAACTTGCATACATTCAATGAACTGCTGCGTACGGCTCACGAACGCGGAGCGTCCGACTTGCACATCACCGCAGG
GGCGCCCCCTGTACTACGGGTGCATGGGAGTCTGCTTTCGCTGGAAGGTTCGCTATTAAGCGCGGAGGATACCTCCGGCA
TGGTTCTGGCCGTGATGACGCCGGATCAGGCGGAGCGCTTCGGTCGGACAGGAGAGGTCGACTTCTCCTATGAAGTCGAA
GGGCTGTCCCGCTACCGGGTCAACGCTTACAGGCAGCGGGGCAAGGTATCACTCGCCGCGCGAACCATCCCGGCCAAGAT
TCCGACGCTTGAGGAGCTGCGCCTGCCGCCGGCGGTGCAGTCCCTGGCGCAGAGGCCGCACGGGCTTGTGCTCGTAACCG
GGCCGACGGGGAGCGGCAAGTCCTCTACGTTGGCCGCGCTGATCAACCATATTAACAAGACGCAGCGCAAGCATATCGTC
ACGCTCGAGGATCCTATCGAGTTCCTGCATGCGCACGGCTCGTCGGTGATTAACCAGCGGGAAGTCGGCAGCGATACCCG
CAGCTTCGCGGACGGGCTGAGGGCGGTCCTCCGCCAGGACCCGGATGTGATCCTGGTCGGCGAGATGCGCGACCTGGAGA
CGATCACGGCGGCGGTGACCGCGGCCGAAACCGGGCACCTTGTGTTCGCTACGCTGCACACAACGGATGCGCCGCAGACG
ATCGACCGGATCGTTGACGCGTTCCCGGCCCACCAGCAGGGACAGATTCGCATCCAGCTGGCCGCCGTCCTGGTGGGCGT
GGTCTCTCAGCGGCTGCTGCCGAAACCGCGCGGCGAAGGGCGGACCTGCGTCACCGAGATCATGATGAACACGCCGGCGG
TGGCGAACCTGATCCGCACGGAGAAGGTGCATCAGATCAAGAGTGTGATGCAGACCGGACGCCTGCAGGGCATGCATACG
ATGGACATGGCGATCAAGGAGCTTCTTCAGCAGGGGCTGGTTGATCCGCTGGCCGCCAAGGCGTATTTGCAGGAAGGCGG
TGCCTGA
ATGTCTAACTTGCATACATTCAATGAACTGCTGCGTACGGCTCACGAACGCGGAGCGTCCGACTTGCACATCACCGCAGG
GGCGCCCCCTGTACTACGGGTGCATGGGAGTCTGCTTTCGCTGGAAGGTTCGCTATTAAGCGCGGAGGATACCTCCGGCA
TGGTTCTGGCCGTGATGACGCCGGATCAGGCGGAGCGCTTCGGTCGGACAGGAGAGGTCGACTTCTCCTATGAAGTCGAA
GGGCTGTCCCGCTACCGGGTCAACGCTTACAGGCAGCGGGGCAAGGTATCACTCGCCGCGCGAACCATCCCGGCCAAGAT
TCCGACGCTTGAGGAGCTGCGCCTGCCGCCGGCGGTGCAGTCCCTGGCGCAGAGGCCGCACGGGCTTGTGCTCGTAACCG
GGCCGACGGGGAGCGGCAAGTCCTCTACGTTGGCCGCGCTGATCAACCATATTAACAAGACGCAGCGCAAGCATATCGTC
ACGCTCGAGGATCCTATCGAGTTCCTGCATGCGCACGGCTCGTCGGTGATTAACCAGCGGGAAGTCGGCAGCGATACCCG
CAGCTTCGCGGACGGGCTGAGGGCGGTCCTCCGCCAGGACCCGGATGTGATCCTGGTCGGCGAGATGCGCGACCTGGAGA
CGATCACGGCGGCGGTGACCGCGGCCGAAACCGGGCACCTTGTGTTCGCTACGCTGCACACAACGGATGCGCCGCAGACG
ATCGACCGGATCGTTGACGCGTTCCCGGCCCACCAGCAGGGACAGATTCGCATCCAGCTGGCCGCCGTCCTGGTGGGCGT
GGTCTCTCAGCGGCTGCTGCCGAAACCGCGCGGCGAAGGGCGGACCTGCGTCACCGAGATCATGATGAACACGCCGGCGG
TGGCGAACCTGATCCGCACGGAGAAGGTGCATCAGATCAAGAGTGTGATGCAGACCGGACGCCTGCAGGGCATGCATACG
ATGGACATGGCGATCAAGGAGCTTCTTCAGCAGGGGCTGGTTGATCCGCTGGCCGCCAAGGCGTATTTGCAGGAAGGCGG
TGCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
54.294 |
93.678 |
0.509 |
| pilT | Neisseria meningitidis 8013 |
51.632 |
96.839 |
0.5 |
| pilT | Neisseria gonorrhoeae MS11 |
51.19 |
96.552 |
0.494 |
| pilT | Pseudomonas aeruginosa PAK |
50 |
93.678 |
0.468 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.847 |
93.966 |
0.468 |
| pilT | Vibrio cholerae strain A1552 |
49.847 |
93.966 |
0.468 |
| pilT | Pseudomonas stutzeri DSM 10701 |
49.096 |
95.402 |
0.468 |
| pilT | Acinetobacter baylyi ADP1 |
48.649 |
95.69 |
0.466 |
| pilT | Acinetobacter baumannii D1279779 |
48.795 |
95.402 |
0.466 |
| pilT | Acinetobacter nosocomialis M2 |
48.795 |
95.402 |
0.466 |
| pilT | Acinetobacter baumannii strain A118 |
48.795 |
95.402 |
0.466 |
| pilT | Legionella pneumophila strain ERS1305867 |
48.773 |
93.678 |
0.457 |
| pilT | Legionella pneumophila strain Lp02 |
48.773 |
93.678 |
0.457 |
| pilU | Pseudomonas stutzeri DSM 10701 |
45.399 |
93.678 |
0.425 |
| pilU | Vibrio cholerae strain A1552 |
44.051 |
89.368 |
0.394 |
| pilU | Acinetobacter baylyi ADP1 |
41.358 |
93.103 |
0.385 |