Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | AWO_RS01045 | Genome accession | NC_016894 |
| Coordinates | 232922..233980 (+) | Length | 352 a.a. |
| NCBI ID | WP_014354612.1 | Uniprot ID | - |
| Organism | Acetobacterium woodii DSM 1030 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 227922..238980
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWO_RS01035 (Awo_c01970) | - | 228981..231209 (+) | 2229 | WP_014354610.1 | EAL domain-containing protein | - |
| AWO_RS01040 (Awo_c01980) | - | 231233..232912 (+) | 1680 | WP_014354611.1 | GspE/PulE family protein | - |
| AWO_RS01045 (Awo_c01990) | pilT | 232922..233980 (+) | 1059 | WP_014354612.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| AWO_RS18285 (Awo_c02000) | - | 234734..235225 (+) | 492 | WP_014354613.1 | type II secretion system protein | - |
| AWO_RS01055 (Awo_c02010) | - | 235579..235974 (+) | 396 | WP_014354614.1 | hypothetical protein | - |
| AWO_RS01060 (Awo_c02020) | - | 236083..236847 (+) | 765 | WP_014354615.1 | A24 family peptidase | - |
| AWO_RS01065 (Awo_c02030) | - | 236882..238066 (+) | 1185 | WP_014354616.1 | type II secretion system F family protein | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 39379.92 Da Isoelectric Point: 6.7266
>NTDB_id=43918 AWO_RS01045 WP_014354612.1 232922..233980(+) (pilT) [Acetobacterium woodii DSM 1030]
MVSLLDLVAYGRENKCSDIHLTQGLPPVFRKNGKLFRSNFNHTPKDTEAWIFSMLNFKQKEKLEANEDVDFSHVTPEGLR
QRVNVYRQQGQYTAAIRLLNDTMPTFEELGLPPIIRKLADEPRGLILITGPTGSGKSTTLASMIDYINTNRASHILTIED
PIEYKHNHKKGIVHQREVGMDVVSFEAALRSCLREDPDVILVGEMRDYETISAAVTAAETGHLVLSTLHTIGAANTIDRI
IDVFPTHSQQQIRAQLSSTIKGVVTQQLVPLADGTGQMAALEIMLGTDAVLNLIRERKTHQLASVMQTGGREGMRTLNAD
LVQLVREGKITYETGLEWATDRNEFNQYFGRK
MVSLLDLVAYGRENKCSDIHLTQGLPPVFRKNGKLFRSNFNHTPKDTEAWIFSMLNFKQKEKLEANEDVDFSHVTPEGLR
QRVNVYRQQGQYTAAIRLLNDTMPTFEELGLPPIIRKLADEPRGLILITGPTGSGKSTTLASMIDYINTNRASHILTIED
PIEYKHNHKKGIVHQREVGMDVVSFEAALRSCLREDPDVILVGEMRDYETISAAVTAAETGHLVLSTLHTIGAANTIDRI
IDVFPTHSQQQIRAQLSSTIKGVVTQQLVPLADGTGQMAALEIMLGTDAVLNLIRERKTHQLASVMQTGGREGMRTLNAD
LVQLVREGKITYETGLEWATDRNEFNQYFGRK
Nucleotide
Download Length: 1059 bp
>NTDB_id=43918 AWO_RS01045 WP_014354612.1 232922..233980(+) (pilT) [Acetobacterium woodii DSM 1030]
ATGGTAAGCTTATTAGATTTGGTTGCTTATGGACGAGAAAATAAGTGTTCAGATATTCATCTGACTCAAGGATTACCACC
GGTGTTCAGAAAAAACGGAAAGCTTTTCCGAAGTAATTTTAATCATACACCAAAAGATACCGAAGCCTGGATTTTCAGCA
TGCTGAATTTCAAGCAAAAAGAAAAATTGGAAGCGAATGAAGATGTCGATTTTTCACATGTGACCCCAGAAGGGTTGAGG
CAGCGGGTGAATGTTTACCGCCAGCAGGGACAATATACGGCGGCTATTCGGTTGCTCAATGATACCATGCCGACCTTTGA
AGAATTGGGATTACCGCCGATTATTAGAAAACTGGCCGATGAACCGCGGGGACTGATCCTGATTACCGGCCCGACCGGGA
GCGGAAAATCAACAACGCTGGCATCAATGATTGACTATATCAATACCAATCGGGCTTCGCATATTCTTACAATTGAAGAT
CCGATTGAATACAAACATAATCATAAAAAAGGCATTGTTCATCAACGGGAAGTGGGCATGGACGTGGTCTCTTTTGAAGC
GGCATTGCGCTCCTGTTTGCGGGAAGATCCAGATGTTATTCTGGTCGGGGAAATGCGTGACTATGAAACCATTTCGGCGG
CCGTTACCGCCGCCGAAACCGGACATCTGGTATTATCGACATTACACACGATTGGTGCGGCCAATACCATTGACCGAATC
ATTGATGTTTTTCCTACGCACAGCCAGCAGCAGATTAGAGCCCAATTATCGAGCACGATAAAAGGGGTGGTGACCCAACA
ATTGGTTCCACTTGCCGATGGCACCGGGCAGATGGCGGCACTGGAAATTATGTTGGGTACCGATGCGGTCCTGAATCTGA
TCCGCGAACGAAAAACCCATCAATTGGCATCAGTCATGCAAACCGGCGGCCGGGAAGGGATGAGAACACTGAATGCAGAT
CTTGTTCAGCTGGTCAGAGAAGGAAAAATTACCTATGAAACCGGTTTGGAGTGGGCGACCGATAGAAATGAGTTTAACCA
GTATTTTGGCCGAAAATAA
ATGGTAAGCTTATTAGATTTGGTTGCTTATGGACGAGAAAATAAGTGTTCAGATATTCATCTGACTCAAGGATTACCACC
GGTGTTCAGAAAAAACGGAAAGCTTTTCCGAAGTAATTTTAATCATACACCAAAAGATACCGAAGCCTGGATTTTCAGCA
TGCTGAATTTCAAGCAAAAAGAAAAATTGGAAGCGAATGAAGATGTCGATTTTTCACATGTGACCCCAGAAGGGTTGAGG
CAGCGGGTGAATGTTTACCGCCAGCAGGGACAATATACGGCGGCTATTCGGTTGCTCAATGATACCATGCCGACCTTTGA
AGAATTGGGATTACCGCCGATTATTAGAAAACTGGCCGATGAACCGCGGGGACTGATCCTGATTACCGGCCCGACCGGGA
GCGGAAAATCAACAACGCTGGCATCAATGATTGACTATATCAATACCAATCGGGCTTCGCATATTCTTACAATTGAAGAT
CCGATTGAATACAAACATAATCATAAAAAAGGCATTGTTCATCAACGGGAAGTGGGCATGGACGTGGTCTCTTTTGAAGC
GGCATTGCGCTCCTGTTTGCGGGAAGATCCAGATGTTATTCTGGTCGGGGAAATGCGTGACTATGAAACCATTTCGGCGG
CCGTTACCGCCGCCGAAACCGGACATCTGGTATTATCGACATTACACACGATTGGTGCGGCCAATACCATTGACCGAATC
ATTGATGTTTTTCCTACGCACAGCCAGCAGCAGATTAGAGCCCAATTATCGAGCACGATAAAAGGGGTGGTGACCCAACA
ATTGGTTCCACTTGCCGATGGCACCGGGCAGATGGCGGCACTGGAAATTATGTTGGGTACCGATGCGGTCCTGAATCTGA
TCCGCGAACGAAAAACCCATCAATTGGCATCAGTCATGCAAACCGGCGGCCGGGAAGGGATGAGAACACTGAATGCAGAT
CTTGTTCAGCTGGTCAGAGAAGGAAAAATTACCTATGAAACCGGTTTGGAGTGGGCGACCGATAGAAATGAGTTTAACCA
GTATTTTGGCCGAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.754 |
98.011 |
0.517 |
| pilT | Acinetobacter baylyi ADP1 |
48.415 |
98.58 |
0.477 |
| pilT | Pseudomonas stutzeri DSM 10701 |
47.839 |
98.58 |
0.472 |
| pilT | Legionella pneumophila strain Lp02 |
48.68 |
96.875 |
0.472 |
| pilT | Legionella pneumophila strain ERS1305867 |
48.68 |
96.875 |
0.472 |
| pilT | Pseudomonas aeruginosa PAK |
48.673 |
96.307 |
0.469 |
| pilT | Acinetobacter baumannii D1279779 |
47.826 |
98.011 |
0.469 |
| pilT | Acinetobacter nosocomialis M2 |
47.826 |
98.011 |
0.469 |
| pilT | Acinetobacter baumannii strain A118 |
47.826 |
98.011 |
0.469 |
| pilT | Neisseria meningitidis 8013 |
48.083 |
96.307 |
0.463 |
| pilT | Neisseria gonorrhoeae MS11 |
47.788 |
96.307 |
0.46 |
| pilT | Vibrio cholerae strain A1552 |
47.59 |
94.318 |
0.449 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
47.59 |
94.318 |
0.449 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.791 |
95.17 |
0.398 |
| pilU | Vibrio cholerae strain A1552 |
39.458 |
94.318 |
0.372 |
| pilU | Acinetobacter baylyi ADP1 |
37.941 |
96.591 |
0.366 |