Detailed information NTG0438278

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HGK49_RS07395
• Genome accession: NZ_CP051434
• Coordinates: 1530366..1531805 (-)
• Length: 479 a.a.
• NCBI ID: WP_202132846.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-004
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1525366..1536805

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGK49_RS07370 (HGK49_07365)	recG	1526503..1528374 (-)	1872	WP_202132843.1	ATP-dependent DNA helicase RecG	-
HGK49_RS07375 (HGK49_07370)	-	1528456..1528800 (+)	345	WP_202132844.1	hypothetical protein	-
HGK49_RS07380 (HGK49_07375)	-	1528804..1529439 (+)	636	WP_202132845.1	outer membrane protein	-
HGK49_RS07385 (HGK49_07380)	-	1529436..1530188 (-)	753	WP_000767499.1	exodeoxyribonuclease III	-
HGK49_RS07395 (HGK49_07390)	comH	1530366..1531805 (-)	1440	WP_202132846.1	competence protein	Machinery gene
HGK49_RS07400 (HGK49_07395)	dnaA	1532033..1533400 (-)	1368	WP_202132847.1	chromosomal replication initiator protein DnaA	-
HGK49_RS07405 (HGK49_07400)	-	1533552..1534088 (+)	537	WP_202132848.1	purine-nucleoside phosphorylase	-
HGK49_RS07410 (HGK49_07405)	-	1534135..1534374 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HGK49_RS07415 (HGK49_07410)	glmS	1534375..1536168 (+)	1794	WP_202132849.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55024.03 Da
• Isoelectric Point: 6.7663

>NTDB_id=438278 HGK49_RS07395 WP_202132846.1 1530366..1531805(-) (comH) [Helicobacter pylori strain ASHA-004]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=438278 HGK49_RS07395 WP_202132846.1 1530366..1531805(-) (comH) [Helicobacter pylori strain ASHA-004]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACACAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.902	100	0.929