Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CLOST_RS01090 | Genome accession | NC_014614 |
| Coordinates | 220099..221157 (+) | Length | 352 a.a. |
| NCBI ID | WP_013360408.1 | Uniprot ID | - |
| Organism | Acetoanaerobium sticklandii | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 215099..226157
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLOST_RS13365 (CLOST_0182) | - | 216537..216905 (+) | 369 | WP_013360405.1 | hypothetical protein | - |
| CLOST_RS01080 (CLOST_0183) | - | 216902..217945 (-) | 1044 | WP_013360406.1 | FAD:protein FMN transferase | - |
| CLOST_RS01085 (CLOST_0184) | - | 218293..219972 (+) | 1680 | WP_013360407.1 | GspE/PulE family protein | - |
| CLOST_RS01090 (CLOST_0185) | pilT | 220099..221157 (+) | 1059 | WP_013360408.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CLOST_RS01095 (CLOST_0186) | - | 221170..222387 (+) | 1218 | WP_013360409.1 | type II secretion system F family protein | - |
| CLOST_RS14180 (CLOST_0187) | - | 222452..222841 (+) | 390 | WP_013360410.1 | type II secretion system protein | - |
| CLOST_RS01105 (CLOST_0188) | - | 223182..223610 (+) | 429 | WP_013360411.1 | hypothetical protein | - |
| CLOST_RS01110 (CLOST_0189) | - | 223656..225056 (+) | 1401 | WP_013360412.1 | VWA domain-containing protein | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 39154.08 Da Isoelectric Point: 7.5092
>NTDB_id=38616 CLOST_RS01090 WP_013360408.1 220099..221157(+) (pilT) [Acetoanaerobium sticklandii]
MNVLELLDKAISENASDIHITVGLPPIMRVNGALIKMQETPCTPRDSLNIVNQMLKSKQRDELEEKGEIDFSYSEQSIGR
FRANIYKQRGSYGVALRVVPMYVPTIEGLNLPPILKDLSMKQRGLILVTGPTGSGKSTTLAAMINHMNNNRGSHVITIED
PIEYLHRHNKCMINQREIGNDTKTFSNALRAALRQDPDVILVGEMRDLETISTAITAAETGHLVLSTLHTVGATKTTDRI
IDVFPPYQQQQIRTQLASVLEGIISQQIIPRADGNGRVAAFELLIATPAVRNLIREGKTHQLMTSLETGSKFGMNTMDSA
LIKLYKDGVIDNENLRKYAVDIDMINKQIGYY
MNVLELLDKAISENASDIHITVGLPPIMRVNGALIKMQETPCTPRDSLNIVNQMLKSKQRDELEEKGEIDFSYSEQSIGR
FRANIYKQRGSYGVALRVVPMYVPTIEGLNLPPILKDLSMKQRGLILVTGPTGSGKSTTLAAMINHMNNNRGSHVITIED
PIEYLHRHNKCMINQREIGNDTKTFSNALRAALRQDPDVILVGEMRDLETISTAITAAETGHLVLSTLHTVGATKTTDRI
IDVFPPYQQQQIRTQLASVLEGIISQQIIPRADGNGRVAAFELLIATPAVRNLIREGKTHQLMTSLETGSKFGMNTMDSA
LIKLYKDGVIDNENLRKYAVDIDMINKQIGYY
Nucleotide
Download Length: 1059 bp
>NTDB_id=38616 CLOST_RS01090 WP_013360408.1 220099..221157(+) (pilT) [Acetoanaerobium sticklandii]
GTGAATGTTTTAGAGTTACTAGATAAAGCCATAAGCGAAAATGCTTCTGATATTCACATTACAGTAGGACTACCTCCTAT
AATGAGGGTGAACGGAGCACTTATCAAGATGCAAGAAACTCCATGCACCCCTAGAGATAGCCTAAACATAGTAAATCAAA
TGCTAAAAAGCAAGCAAAGAGACGAGCTTGAAGAAAAAGGAGAGATAGATTTTTCCTACTCTGAGCAAAGTATAGGAAGG
TTTAGAGCTAATATTTACAAACAAAGAGGAAGCTATGGTGTAGCACTTAGAGTAGTACCTATGTATGTGCCTACTATAGA
GGGATTAAATCTTCCACCAATACTAAAGGATTTATCTATGAAGCAAAGAGGATTAATACTAGTTACTGGACCTACAGGAA
GTGGTAAATCAACTACACTAGCAGCAATGATAAATCATATGAATAACAATAGAGGCTCTCATGTCATAACGATAGAGGAT
CCTATTGAGTATCTTCATAGACATAATAAGTGCATGATAAATCAAAGAGAAATAGGGAATGACACAAAAACATTTTCAAA
TGCACTAAGAGCCGCTCTAAGGCAAGATCCAGATGTAATACTAGTAGGCGAGATGAGAGACCTAGAAACCATATCTACAG
CTATAACAGCTGCAGAAACAGGTCACTTAGTACTATCAACTCTACATACAGTAGGAGCAACAAAAACCACTGACCGTATC
ATAGACGTATTTCCGCCATATCAGCAGCAACAGATACGCACTCAGCTAGCATCAGTACTAGAGGGAATCATATCTCAGCA
GATTATACCTAGAGCTGATGGAAACGGAAGAGTAGCGGCATTTGAACTACTAATAGCTACACCAGCTGTTAGAAACTTAA
TCAGAGAGGGCAAAACTCATCAACTGATGACCTCGCTAGAAACTGGTTCGAAATTTGGTATGAACACCATGGATTCAGCT
CTTATCAAGCTGTATAAAGATGGTGTAATAGACAATGAAAACCTTAGAAAATATGCAGTTGATATAGATATGATAAACAA
GCAGATAGGCTACTACTAA
GTGAATGTTTTAGAGTTACTAGATAAAGCCATAAGCGAAAATGCTTCTGATATTCACATTACAGTAGGACTACCTCCTAT
AATGAGGGTGAACGGAGCACTTATCAAGATGCAAGAAACTCCATGCACCCCTAGAGATAGCCTAAACATAGTAAATCAAA
TGCTAAAAAGCAAGCAAAGAGACGAGCTTGAAGAAAAAGGAGAGATAGATTTTTCCTACTCTGAGCAAAGTATAGGAAGG
TTTAGAGCTAATATTTACAAACAAAGAGGAAGCTATGGTGTAGCACTTAGAGTAGTACCTATGTATGTGCCTACTATAGA
GGGATTAAATCTTCCACCAATACTAAAGGATTTATCTATGAAGCAAAGAGGATTAATACTAGTTACTGGACCTACAGGAA
GTGGTAAATCAACTACACTAGCAGCAATGATAAATCATATGAATAACAATAGAGGCTCTCATGTCATAACGATAGAGGAT
CCTATTGAGTATCTTCATAGACATAATAAGTGCATGATAAATCAAAGAGAAATAGGGAATGACACAAAAACATTTTCAAA
TGCACTAAGAGCCGCTCTAAGGCAAGATCCAGATGTAATACTAGTAGGCGAGATGAGAGACCTAGAAACCATATCTACAG
CTATAACAGCTGCAGAAACAGGTCACTTAGTACTATCAACTCTACATACAGTAGGAGCAACAAAAACCACTGACCGTATC
ATAGACGTATTTCCGCCATATCAGCAGCAACAGATACGCACTCAGCTAGCATCAGTACTAGAGGGAATCATATCTCAGCA
GATTATACCTAGAGCTGATGGAAACGGAAGAGTAGCGGCATTTGAACTACTAATAGCTACACCAGCTGTTAGAAACTTAA
TCAGAGAGGGCAAAACTCATCAACTGATGACCTCGCTAGAAACTGGTTCGAAATTTGGTATGAACACCATGGATTCAGCT
CTTATCAAGCTGTATAAAGATGGTGTAATAGACAATGAAAACCTTAGAAAATATGCAGTTGATATAGATATGATAAACAA
GCAGATAGGCTACTACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.56 |
96.875 |
0.48 |
| pilT | Acinetobacter baylyi ADP1 |
48.968 |
96.307 |
0.472 |
| pilT | Acinetobacter baumannii strain A118 |
48.378 |
96.307 |
0.466 |
| pilT | Acinetobacter nosocomialis M2 |
48.378 |
96.307 |
0.466 |
| pilT | Acinetobacter baumannii D1279779 |
48.378 |
96.307 |
0.466 |
| pilT | Pseudomonas aeruginosa PAK |
48.378 |
96.307 |
0.466 |
| pilT | Vibrio cholerae strain A1552 |
47.674 |
97.727 |
0.466 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
47.674 |
97.727 |
0.466 |
| pilT | Neisseria meningitidis 8013 |
47.941 |
96.591 |
0.463 |
| pilT | Neisseria gonorrhoeae MS11 |
46.903 |
96.307 |
0.452 |
| pilT | Pseudomonas stutzeri DSM 10701 |
46.903 |
96.307 |
0.452 |
| pilT | Legionella pneumophila strain Lp02 |
46.334 |
96.875 |
0.449 |
| pilT | Legionella pneumophila strain ERS1305867 |
46.334 |
96.875 |
0.449 |
| pilU | Pseudomonas stutzeri DSM 10701 |
44.248 |
96.307 |
0.426 |
| pilU | Acinetobacter baylyi ADP1 |
40.882 |
96.591 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
39.521 |
94.886 |
0.375 |