Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GHB95_RS10295 | Genome accession | NZ_CP050930 |
| Coordinates | 1968466..1969509 (+) | Length | 347 a.a. |
| NCBI ID | WP_003690200.1 | Uniprot ID | Q53432 |
| Organism | Neisseria gonorrhoeae strain NG211 | ||
| Function | pseudopilus biogenesis (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1963466..1974509
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHB95_RS10275 (GHB95_10200) | dksA | 1965849..1966265 (-) | 417 | WP_003692108.1 | RNA polymerase-binding protein DksA | - |
| GHB95_RS10280 (GHB95_10205) | proC | 1966413..1967204 (-) | 792 | WP_003696395.1 | pyrroline-5-carboxylate reductase | - |
| GHB95_RS10285 (GHB95_10210) | - | 1967253..1967660 (-) | 408 | WP_003690202.1 | hypothetical protein | - |
| GHB95_RS10290 (GHB95_10215) | - | 1967660..1968346 (-) | 687 | WP_003690201.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| GHB95_RS10295 (GHB95_10220) | pilT | 1968466..1969509 (+) | 1044 | WP_003690200.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GHB95_RS10300 (GHB95_10225) | pilU | 1969673..1970899 (+) | 1227 | WP_003697786.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| GHB95_RS10305 (GHB95_10230) | yccS | 1971016..1973166 (+) | 2151 | WP_003690198.1 | YccS family putative transporter | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37940.31 Da Isoelectric Point: 6.8962
>NTDB_id=382290 GHB95_RS10295 WP_003690200.1 1968466..1969509(+) (pilT) [Neisseria gonorrhoeae strain NG211]
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEAARRRAQNSESMSF
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEAARRRAQNSESMSF
Nucleotide
Download Length: 1044 bp
>NTDB_id=382290 GHB95_RS10295 WP_003690200.1 1968466..1969509(+) (pilT) [Neisseria gonorrhoeae strain NG211]
ATGCAGATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGACATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGCAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGCCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAACGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGAGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCCGAAACCATCGGCTTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCGGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCCGCCGGAGAGAAAGAAATGGTGCGTTCCATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACGATGGACCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGCCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
ATGCAGATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGACATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGCAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGCCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAACGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGAGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCCGAAACCATCGGCTTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCGGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCCGCCGGAGAGAAAGAAATGGTGCGTTCCATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACGATGGACCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGCCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| pilT | Neisseria meningitidis 8013 |
99.135 |
100 |
0.991 |
| pilT | Acinetobacter baumannii D1279779 |
67.826 |
99.424 |
0.674 |
| pilT | Acinetobacter baumannii strain A118 |
67.826 |
99.424 |
0.674 |
| pilT | Acinetobacter nosocomialis M2 |
67.826 |
99.424 |
0.674 |
| pilT | Acinetobacter baylyi ADP1 |
67.246 |
99.424 |
0.669 |
| pilT | Pseudomonas stutzeri DSM 10701 |
66.957 |
99.424 |
0.666 |
| pilT | Pseudomonas aeruginosa PAK |
66.377 |
99.424 |
0.66 |
| pilT | Legionella pneumophila strain Lp02 |
64.516 |
98.271 |
0.634 |
| pilT | Legionella pneumophila strain ERS1305867 |
64.516 |
98.271 |
0.634 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
64.242 |
95.101 |
0.611 |
| pilT | Vibrio cholerae strain A1552 |
64.242 |
95.101 |
0.611 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.392 |
97.695 |
0.522 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.29 |
99.424 |
0.401 |
| pilU | Vibrio cholerae strain A1552 |
38.329 |
100 |
0.383 |
| pilU | Acinetobacter baylyi ADP1 |
38.439 |
99.712 |
0.383 |