Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FK728_RS08315 | Genome accession | NZ_CP041587 |
| Coordinates | 1730592..1730972 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain J9 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1725592..1735972
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FK728_RS08285 (FK728_01637) | kdsB | 1726495..1727256 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| FK728_RS08290 (FK728_01638) | - | 1727268..1728248 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| FK728_RS08295 (FK728_01639) | - | 1728260..1728601 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FK728_RS08300 (FK728_01640) | - | 1728619..1729392 (+) | 774 | WP_000497296.1 | TatD family hydrolase | - |
| FK728_RS08305 (FK728_01641) | - | 1729430..1730038 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FK728_RS08310 (FK728_01642) | - | 1730048..1730602 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| FK728_RS08315 (FK728_01643) | xcpV | 1730592..1730972 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FK728_RS08320 (FK728_01644) | xcpW | 1730972..1731673 (+) | 702 | WP_000594585.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FK728_RS08325 (FK728_01645) | gspK | 1731673..1732632 (+) | 960 | WP_000301467.1 | type II secretion system minor pseudopilin GspK | - |
| FK728_RS08330 (FK728_01646) | - | 1732862..1733458 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FK728_RS08335 (FK728_01647) | ung | 1733509..1734222 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FK728_RS08340 (FK728_01648) | - | 1734219..1735343 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FK728_RS08345 (FK728_01649) | tadA | 1735350..1735853 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=372390 FK728_RS08315 WP_000836911.1 1730592..1730972(+) (xcpV) [Acinetobacter baumannii strain J9]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=372390 FK728_RS08315 WP_000836911.1 1730592..1730972(+) (xcpV) [Acinetobacter baumannii strain J9]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |