Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | FISUC_RS05250 | Genome accession | NC_013410 |
| Coordinates | 1303502..1304569 (-) | Length | 355 a.a. |
| NCBI ID | WP_014545789.1 | Uniprot ID | C9RPX9 |
| Organism | Fibrobacter succinogenes subsp. succinogenes S85 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1298502..1309569
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FISUC_RS05245 (Fisuc_1050) | - | 1302296..1303498 (-) | 1203 | WP_014545788.1 | type II secretion system F family protein | - |
| FISUC_RS05250 (Fisuc_1051) | pilT | 1303502..1304569 (-) | 1068 | WP_014545789.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FISUC_RS05255 (Fisuc_1052) | - | 1304621..1305139 (+) | 519 | WP_014545790.1 | TlpA family protein disulfide reductase | - |
| FISUC_RS05260 (Fisuc_1053) | epmA | 1305248..1306219 (-) | 972 | WP_014545791.1 | EF-P lysine aminoacylase EpmA | - |
| FISUC_RS05265 (Fisuc_1054) | - | 1306219..1307595 (-) | 1377 | WP_014545792.1 | FISUMP domain-containing protein | - |
| FISUC_RS05270 (Fisuc_1055) | - | 1307776..1308999 (+) | 1224 | WP_014545793.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 39452.85 Da Isoelectric Point: 7.9525
>NTDB_id=35459 FISUC_RS05250 WP_014545789.1 1303502..1304569(-) (pilT) [Fibrobacter succinogenes subsp. succinogenes S85]
MAYNIQDLLAEMVKRGASDLHITAGAPPLIRLSGKLTPIGENKLKPDETMRMTYSLMNEAQKKTFEQQKECDFSFGIANL
ARFRANAYLQRGCVALALRIIPLDIKTFKDLGLPKIMAEFTTRPSGLVLVTGATGSGKSTTLAAMIDKINKERHDHILTV
EDPIEFLHKHQGCMINQREVGSDTHSFAQALKMALRQDPDVVLIGEMRDLETIRSALTIAETGHLTFATLHTNSCVQTIN
RVVDAFPKGEQQTVRTQLSFVLQGVICQTLLPKIGGGRVMAYEVMNVTPGIRALIRDDKVHQIESMIEIGQKFGMNTMNM
CLCELVKNHKVDRFDALARSSSPDQLEQLFVKEGV
MAYNIQDLLAEMVKRGASDLHITAGAPPLIRLSGKLTPIGENKLKPDETMRMTYSLMNEAQKKTFEQQKECDFSFGIANL
ARFRANAYLQRGCVALALRIIPLDIKTFKDLGLPKIMAEFTTRPSGLVLVTGATGSGKSTTLAAMIDKINKERHDHILTV
EDPIEFLHKHQGCMINQREVGSDTHSFAQALKMALRQDPDVVLIGEMRDLETIRSALTIAETGHLTFATLHTNSCVQTIN
RVVDAFPKGEQQTVRTQLSFVLQGVICQTLLPKIGGGRVMAYEVMNVTPGIRALIRDDKVHQIESMIEIGQKFGMNTMNM
CLCELVKNHKVDRFDALARSSSPDQLEQLFVKEGV
Nucleotide
Download Length: 1068 bp
>NTDB_id=35459 FISUC_RS05250 WP_014545789.1 1303502..1304569(-) (pilT) [Fibrobacter succinogenes subsp. succinogenes S85]
ATGGCATATAACATTCAAGATCTTTTAGCAGAAATGGTCAAACGTGGGGCGTCCGACTTGCATATTACGGCCGGCGCACC
CCCTCTTATTCGTCTTTCCGGCAAGCTTACCCCCATCGGGGAAAACAAGCTTAAGCCCGACGAAACCATGCGTATGACTT
ACAGCTTGATGAATGAAGCCCAGAAAAAGACTTTTGAACAGCAAAAGGAATGCGACTTTTCATTCGGTATTGCAAATCTT
GCGCGATTCCGTGCGAACGCCTACTTGCAGCGTGGCTGTGTGGCGCTTGCCCTCCGTATTATTCCGCTTGATATCAAGAC
GTTTAAGGACCTCGGCCTCCCGAAGATTATGGCCGAATTTACGACACGTCCTTCTGGCCTTGTGCTTGTGACGGGTGCTA
CCGGTTCTGGTAAGTCCACGACCTTGGCTGCCATGATCGACAAGATTAACAAGGAACGTCACGACCACATTCTGACGGTT
GAAGACCCGATCGAATTTTTGCATAAGCATCAGGGTTGCATGATCAACCAGCGTGAAGTCGGTAGCGATACGCATAGCTT
TGCGCAGGCCCTCAAGATGGCTCTTCGTCAGGACCCGGACGTGGTGCTCATCGGCGAAATGCGTGACTTGGAAACGATCC
GCTCGGCGCTTACGATTGCCGAAACGGGTCACTTGACTTTTGCAACGCTTCATACAAACTCTTGCGTGCAGACCATCAAC
CGTGTGGTCGACGCCTTCCCGAAGGGTGAACAGCAGACCGTGCGTACGCAGCTCTCGTTTGTGCTCCAGGGAGTTATCTG
TCAGACCCTTTTGCCAAAGATTGGCGGTGGACGCGTGATGGCGTACGAAGTCATGAACGTGACGCCGGGTATCCGCGCTT
TGATCCGTGATGACAAGGTTCACCAGATTGAATCCATGATTGAAATTGGTCAGAAGTTCGGCATGAACACGATGAACATG
TGCTTGTGTGAACTTGTCAAGAACCACAAGGTCGATCGTTTTGACGCTCTTGCTCGTTCGTCGAGCCCGGATCAGTTGGA
ACAGTTGTTTGTAAAGGAAGGGGTGTAA
ATGGCATATAACATTCAAGATCTTTTAGCAGAAATGGTCAAACGTGGGGCGTCCGACTTGCATATTACGGCCGGCGCACC
CCCTCTTATTCGTCTTTCCGGCAAGCTTACCCCCATCGGGGAAAACAAGCTTAAGCCCGACGAAACCATGCGTATGACTT
ACAGCTTGATGAATGAAGCCCAGAAAAAGACTTTTGAACAGCAAAAGGAATGCGACTTTTCATTCGGTATTGCAAATCTT
GCGCGATTCCGTGCGAACGCCTACTTGCAGCGTGGCTGTGTGGCGCTTGCCCTCCGTATTATTCCGCTTGATATCAAGAC
GTTTAAGGACCTCGGCCTCCCGAAGATTATGGCCGAATTTACGACACGTCCTTCTGGCCTTGTGCTTGTGACGGGTGCTA
CCGGTTCTGGTAAGTCCACGACCTTGGCTGCCATGATCGACAAGATTAACAAGGAACGTCACGACCACATTCTGACGGTT
GAAGACCCGATCGAATTTTTGCATAAGCATCAGGGTTGCATGATCAACCAGCGTGAAGTCGGTAGCGATACGCATAGCTT
TGCGCAGGCCCTCAAGATGGCTCTTCGTCAGGACCCGGACGTGGTGCTCATCGGCGAAATGCGTGACTTGGAAACGATCC
GCTCGGCGCTTACGATTGCCGAAACGGGTCACTTGACTTTTGCAACGCTTCATACAAACTCTTGCGTGCAGACCATCAAC
CGTGTGGTCGACGCCTTCCCGAAGGGTGAACAGCAGACCGTGCGTACGCAGCTCTCGTTTGTGCTCCAGGGAGTTATCTG
TCAGACCCTTTTGCCAAAGATTGGCGGTGGACGCGTGATGGCGTACGAAGTCATGAACGTGACGCCGGGTATCCGCGCTT
TGATCCGTGATGACAAGGTTCACCAGATTGAATCCATGATTGAAATTGGTCAGAAGTTCGGCATGAACACGATGAACATG
TGCTTGTGTGAACTTGTCAAGAACCACAAGGTCGATCGTTTTGACGCTCTTGCTCGTTCGTCGAGCCCGGATCAGTTGGA
ACAGTTGTTTGTAAAGGAAGGGGTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
54.054 |
93.803 |
0.507 |
| pilT | Legionella pneumophila strain Lp02 |
54.054 |
93.803 |
0.507 |
| pilT | Acinetobacter baumannii D1279779 |
54.799 |
90.986 |
0.499 |
| pilT | Acinetobacter baumannii strain A118 |
54.799 |
90.986 |
0.499 |
| pilT | Acinetobacter nosocomialis M2 |
54.799 |
90.986 |
0.499 |
| pilT | Acinetobacter baylyi ADP1 |
51.603 |
96.62 |
0.499 |
| pilT | Pseudomonas aeruginosa PAK |
51.312 |
96.62 |
0.496 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.729 |
96.62 |
0.49 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.991 |
97.746 |
0.479 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.303 |
92.958 |
0.468 |
| pilT | Vibrio cholerae strain A1552 |
50.303 |
92.958 |
0.468 |
| pilT | Neisseria meningitidis 8013 |
49.538 |
91.549 |
0.454 |
| pilT | Neisseria gonorrhoeae MS11 |
49.074 |
91.268 |
0.448 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.88 |
98.873 |
0.414 |
| pilU | Vibrio cholerae strain A1552 |
43.155 |
94.648 |
0.408 |
| pilU | Acinetobacter baylyi ADP1 |
40.87 |
97.183 |
0.397 |