Detailed information NTG0351152

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: E2K99_RS21475
• Genome accession: NZ_CP037993
• Coordinates: 4803733..4804953 (+)
• Length: 406 a.a.
• NCBI ID: WP_121040480.1
• Uniprot ID: -
• Organism: Herbaspirillum huttiense strain NFYY 53159
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4798733..4809953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E2K99_RS21450 (E2K99_21450)	coaD	4798757..4799239 (-)	483	WP_006461533.1	pantetheine-phosphate adenylyltransferase	-
E2K99_RS21455 (E2K99_21455)	rsmD	4799276..4799947 (-)	672	WP_134223495.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
E2K99_RS21460 (E2K99_21460)	-	4800028..4801350 (-)	1323	WP_134223496.1	M16 family metallopeptidase	-
E2K99_RS21465 (E2K99_21465)	-	4801388..4802047 (-)	660	WP_121040476.1	ParA family protein	-
E2K99_RS21470 (E2K99_21470)	-	4802184..4803563 (-)	1380	WP_121040478.1	M16 family metallopeptidase	-
E2K99_RS21475 (E2K99_21475)	pilA	4803733..4804953 (+)	1221	WP_121040480.1	signal recognition particle-docking protein FtsY	Machinery gene
E2K99_RS21480 (E2K99_21480)	-	4804958..4805650 (+)	693	WP_121040482.1	cell division ATP-binding protein FtsE	-
E2K99_RS21485 (E2K99_21485)	ftsX	4805647..4806570 (+)	924	WP_134223497.1	permease-like cell division protein FtsX	-
E2K99_RS21490 (E2K99_21490)	rpoH	4807131..4808030 (+)	900	WP_134223498.1	RNA polymerase sigma factor RpoH	-
E2K99_RS21495 (E2K99_21495)	-	4808119..4808709 (-)	591	WP_034332698.1	SCO family protein	-
E2K99_RS21500 (E2K99_21500)	cyoE	4808722..4809615 (-)	894	WP_134223499.1	heme o synthase	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42724.36 Da
• Isoelectric Point: 5.4879

>NTDB_id=351152 E2K99_RS21475 WP_121040480.1 4803733..4804953(+) (pilA) [Herbaspirillum huttiense strain NFYY 53159]
MFSFFKRKPKPEAQPALPPQAEPAAQPAPVVPPPTESVAPAPAAPAAVQPPVAAPAPVAPPAPTPIADPEPVPQPLTAPA
APPEPVAAIEESAEEVEIVAAPEPAPEVKRSWLSRLKAGLSKTSSNLTTLFVGARIDEDLYEELESALLVSDAGVEATQW
LLAELKKKVKNERLTEAAQVRTALRTLLIDLLQPLQRPLVLGRDKPLVMMIAGVNGAGKTTTIGKLALHLQAHGQSVLLA
AGDTFRAAAREQLAVWGERNNVQVIAQESGDPAAVAYDSVHSAQARGTHVVMVDTAGRLPTQLHLMDELKKIKRVIAKAM
NSAPHEVLLVIDGNTGQNALAQVKAFDDALGLTGLVVTKLDGTAKGGILAAIAKTRPVPLYFIGVGEKIEDLQPFNATEF
VDALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=351152 E2K99_RS21475 WP_121040480.1 4803733..4804953(+) (pilA) [Herbaspirillum huttiense strain NFYY 53159]
ATGTTCAGTTTTTTCAAAAGAAAACCCAAACCGGAAGCGCAACCCGCGCTGCCGCCCCAGGCCGAACCGGCAGCCCAGCC
GGCCCCGGTGGTTCCGCCCCCGACTGAATCCGTTGCTCCTGCTCCTGCCGCTCCCGCTGCGGTTCAGCCACCAGTTGCCG
CGCCTGCACCGGTAGCACCGCCAGCCCCGACGCCGATCGCTGACCCGGAGCCTGTGCCCCAACCCTTGACTGCCCCGGCC
GCCCCCCCGGAGCCGGTGGCCGCCATCGAAGAGTCCGCCGAAGAAGTCGAGATCGTCGCCGCGCCGGAACCGGCCCCAGA
GGTCAAGCGCTCGTGGCTGTCGCGCCTGAAGGCCGGGCTGTCCAAGACCTCGAGCAACCTGACCACGCTGTTCGTGGGTG
CGCGCATCGATGAAGACTTGTACGAGGAACTGGAATCGGCCCTGCTGGTATCGGACGCCGGCGTGGAAGCCACCCAGTGG
CTGCTGGCCGAACTGAAGAAAAAAGTCAAAAACGAGCGCCTGACCGAAGCCGCCCAGGTGCGCACCGCCCTGCGCACCCT
GCTGATCGACCTGCTGCAGCCGCTGCAGCGCCCGCTGGTGCTGGGCCGCGACAAGCCGCTGGTGATGATGATTGCCGGCG
TCAACGGTGCCGGCAAGACCACCACCATCGGCAAGCTGGCCCTGCATCTGCAGGCGCACGGCCAGTCGGTGCTGCTGGCC
GCCGGCGACACCTTCCGCGCTGCGGCCCGCGAGCAGCTGGCGGTCTGGGGCGAGCGCAACAACGTCCAGGTGATCGCGCA
GGAATCCGGCGATCCGGCCGCCGTGGCGTATGACTCGGTGCATTCGGCGCAGGCGCGCGGCACCCATGTGGTGATGGTCG
ATACCGCCGGCCGCCTGCCGACGCAATTGCACCTGATGGATGAACTCAAGAAGATCAAGCGGGTCATTGCCAAGGCGATG
AACTCGGCACCGCATGAAGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAATGCGCTGGCCCAGGTCAAGGCCTTCGA
TGATGCGCTGGGGCTGACCGGCCTGGTGGTGACCAAGCTGGATGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCCA
AGACCCGCCCGGTGCCGCTGTACTTCATCGGCGTGGGCGAGAAGATCGAAGACCTGCAGCCGTTCAATGCCACCGAATTC
GTCGATGCCCTCCTGAGTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (207-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (126-185)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.896	100	0.539