Detailed information
Bioinformatically predicted
Overview
| Name | ymcA | Type | Regulator |
| Locus tag | GII78_RS09080 | Genome accession | NZ_CP045824 |
| Coordinates | 1752488..1752919 (+) | Length | 143 a.a. |
| NCBI ID | WP_003231834.1 | Uniprot ID | G4NVD0 |
| Organism | Bacillus subtilis strain MB8_B10 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1747488..1757919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII78_RS09060 (GII78_09060) | spoVS | 1748049..1748309 (+) | 261 | WP_003154135.1 | stage V sporulation protein SpoVS | - |
| GII78_RS09065 (GII78_09065) | tdh | 1748575..1749618 (+) | 1044 | WP_029726482.1 | L-threonine 3-dehydrogenase | - |
| GII78_RS09070 (GII78_09070) | kbl | 1749631..1750809 (+) | 1179 | WP_014664025.1 | glycine C-acetyltransferase | - |
| GII78_RS09075 (GII78_09075) | miaB | 1750957..1752486 (+) | 1530 | WP_014479820.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| GII78_RS09080 (GII78_09080) | ymcA | 1752488..1752919 (+) | 432 | WP_003231834.1 | regulatory iron-sulfur-containing complex subunit RicA | Regulator |
| GII78_RS09085 (GII78_09085) | cotE | 1753181..1753726 (+) | 546 | WP_003231833.1 | outer spore coat protein CotE | - |
| GII78_RS09090 (GII78_09090) | hexA | 1753859..1756435 (+) | 2577 | WP_003244841.1 | DNA mismatch repair protein MutS | Machinery gene |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16166.27 Da Isoelectric Point: 5.0437
>NTDB_id=347720 GII78_RS09080 WP_003231834.1 1752488..1752919(+) (ymcA) [Bacillus subtilis strain MB8_B10]
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
Nucleotide
Download Length: 432 bp
>NTDB_id=347720 GII78_RS09080 WP_003231834.1 1752488..1752919(+) (ymcA) [Bacillus subtilis strain MB8_B10]
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTACTGCAGCTCGTTGCACA
CACCATTTCCAACCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGCTGTTCTCTCTAA
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTACTGCAGCTCGTTGCACA
CACCATTTCCAACCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGCTGTTCTCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ymcA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |