Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   SOR_RS07905 Genome accession   NC_015291
Coordinates   1570667..1573003 (-) Length   778 a.a.
NCBI ID   WP_001092923.1    Uniprot ID   -
Organism   Streptococcus oralis Uo5     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1565667..1578003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOR_RS07885 (SOR_1612) serS 1566013..1567287 (+) 1275 WP_000884216.1 serine--tRNA ligase -
  SOR_RS07890 (SOR_1613) - 1567311..1568210 (-) 900 WP_000735947.1 TDT family transporter -
  SOR_RS07895 (SOR_1614) - 1568321..1568869 (-) 549 WP_000206780.1 carboxymuconolactone decarboxylase family protein -
  SOR_RS07900 (SOR_1615) - 1569000..1570322 (-) 1323 WP_000891446.1 alanine/glycine:cation symporter family protein -
  SOR_RS07905 (SOR_1616) mutS/mutS2 1570667..1573003 (-) 2337 WP_001092923.1 endonuclease MutS2 Machinery gene
  SOR_RS07910 (SOR_1617) - 1573104..1573652 (-) 549 WP_000623536.1 CvpA family protein -
  SOR_RS07915 (SOR_1618) zapA 1573649..1573951 (-) 303 WP_000002028.1 cell division protein ZapA -
  SOR_RS07920 (SOR_1619) rnhC 1574038..1574919 (+) 882 WP_000146902.1 ribonuclease HIII -
  SOR_RS07925 (SOR_1620) lepB 1574923..1575537 (+) 615 WP_001083983.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87534.37 Da        Isoelectric Point: 6.8006

>NTDB_id=33741 SOR_RS07905 WP_001092923.1 1570667..1573003(-) (mutS/mutS2) [Streptococcus oralis Uo5]
MNTKILETLEFNKIKALFEPHLLTEQGLEELKGLAPTAKVDKIKQAFTEMEEMQALFVEQPHFTILATREISAVCKRLEM
GADLNIEEFLLLKRVLLASRELQGFYTNLENVRLEQLARWFEKLHDFPHLQGSLQALNDAGFIENFASEELARIRRKIHD
SESQVRDVLQDLLKQKAQMLTEGIIASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADER
YEMIRILQELSERVRPHAAEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSENQEIQLLHVRHPLVKNAVANDVHFGKE
LTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPILADKGSRVGVFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVN
QHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRFMQGVPG
RSNAFEIAKRLGLSDVIVGDASQQVNQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLYNELNREKETE
LNKAREQAAEIVELALSESDQILKNLHSKSQLKPHEIIEAKAELKKLAPEKVDLSKNKVLQKAKKNRAPKVGDDIIVLSY
GQRGTLTNQLKDGRWEAQVGLIKMTLEEKEFDLVQAQQEAPVKKKQVNVVKRASGRGPQARLDLRGKRYEEAMNELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTFKG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=33741 SOR_RS07905 WP_001092923.1 1570667..1573003(-) (mutS/mutS2) [Streptococcus oralis Uo5]
ATGAATACAAAAATACTAGAAACCTTAGAATTTAATAAAATCAAGGCCTTGTTTGAACCTCATCTCCTGACAGAACAAGG
ACTAGAGGAGCTAAAAGGCTTGGCCCCAACTGCCAAGGTGGATAAGATCAAACAAGCCTTTACAGAGATGGAGGAAATGC
AAGCCCTATTTGTGGAGCAACCTCACTTTACCATCCTAGCGACGCGTGAGATATCAGCTGTTTGCAAGCGTCTGGAGATG
GGGGCGGACCTCAATATTGAGGAGTTCCTGCTCCTCAAACGGGTCTTGCTGGCTAGCAGAGAGTTGCAAGGCTTTTATAC
CAATCTCGAAAACGTACGCTTGGAGCAGTTGGCGAGATGGTTTGAAAAACTACATGATTTCCCACACTTGCAAGGCAGTC
TCCAAGCCCTAAATGATGCAGGATTTATCGAGAATTTTGCCAGTGAAGAGCTAGCACGCATCCGTCGGAAAATCCATGAT
AGCGAGAGTCAAGTTCGAGATGTCTTACAAGACTTGCTCAAGCAAAAAGCGCAGATGTTGACGGAAGGCATAATCGCTAG
CCGAAATGGCCGTCAAGTCTTACCAGTCAAGAACACCTATCGCAATAAGATTGCAGGTGTTGTCCATGATATTTCTGCTA
GTGGAAACACGGTCTATATCGAGCCACGGGAGGTGGTCAAGCTGAGCGAAGAAATCGCTAGTTTGCGAGCTGACGAACGC
TATGAGATGATTCGCATCCTGCAGGAACTATCAGAACGGGTCCGTCCTCATGCTGCTGAGATTGCTAATGACGCTTGGAT
TATCGGCCATTTAGACTTGATTCGTGCCAAGGTGCGTTTCATCCAAGAAAGACAAGCAGTTGTTCCTCAACTTTCAGAGA
ATCAGGAGATTCAACTTCTTCATGTTCGCCATCCTTTGGTCAAAAATGCTGTCGCAAACGATGTGCACTTCGGTAAGGAA
TTAACGGCCATTGTCATTACAGGTCCCAATACTGGTGGGAAGACCATCATGCTCAAAACCCTGGGCTTGACTCAACTCAT
GGCCCAGTCAGGCTTGCCCATTTTAGCTGATAAGGGGAGCCGTGTCGGTGTTTTTGAGGAAATCTTCGCAGATATCGGGG
ATGAGCAGTCTATCGAACAAAGCTTGTCTACCTTCTCCAGCCACATGACCAATATCGTAGATATTCTTGGCAAGGTCAAC
CAACATTCACTCTTACTCTTGGATGAGTTGGGGGCTGGTACAGATCCTCAAGAGGGAGCCGCCCTTGCTATGGCTATTCT
GGAGGATCTTCGTCTACGTCAGGTCAAGACCATGGCGACGACCCACTATCCAGAACTCAAGGCCTACGGTATCGAAACAG
CCTTTGTGCAAAATGCAAGCATGGAGTTTGATACAGCCAGCCTGCGTCCGACCTATCGCTTTATGCAGGGAGTTCCTGGT
CGAAGCAATGCCTTTGAAATTGCCAAACGCCTAGGACTGTCAGATGTCATCGTCGGGGATGCCAGTCAGCAGGTCAACCA
AGATAATGATGTCAACCGTATCATTGAACAATTGGAAGAGCAAACGCTTGAAAGTCGCAAACGCTTGGACAATATCCGTG
AGGTGGAGCAAGAAAACCTCAAGATGAACCGGGCACTCAAAAAACTCTACAATGAGCTTAATCGTGAAAAGGAAACTGAG
CTCAACAAAGCGCGTGAACAGGCTGCTGAGATTGTGGAACTTGCTCTAAGTGAGAGTGACCAGATTCTCAAGAATCTTCA
CAGCAAGTCTCAACTCAAACCCCACGAAATCATTGAAGCCAAGGCTGAGCTGAAAAAACTGGCTCCTGAAAAAGTCGACT
TGTCTAAAAACAAGGTCCTTCAAAAAGCCAAGAAAAACCGAGCTCCAAAGGTTGGGGATGATATCATTGTTCTCAGTTAT
GGTCAGCGTGGAACCTTGACCAATCAGCTTAAGGACGGCCGTTGGGAAGCCCAAGTCGGTTTGATCAAGATGACCTTGGA
AGAGAAAGAATTTGACCTTGTTCAGGCCCAACAAGAAGCCCCAGTCAAGAAAAAACAAGTCAATGTCGTCAAACGTGCTT
CTGGTCGTGGTCCGCAAGCGAGACTGGATCTCCGAGGCAAACGATACGAAGAGGCTATGAATGAGTTAGACGCCTTTATC
GACCAAGCCCTGCTCAATAACATGGCGCAGGTAGACATTATCCATGGTATCGGAACAGGAGTCATCCGTGAGGGCGTCAC
CAAATACCTGCAAAGAAACAAGCATGTCAAGAGTTTTGGCTATGCTCCACAAAATGCTGGAGGCAGTGGCGCAACCATTG
TGACCTTTAAAGGATAG

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

MutS domain V (MutS_V)

(324-506)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.684

100

0.413

Multiple sequence alignment