Detailed information NTG0033008

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: BAMF_RS34485
• Genome accession: NC_014551
• Coordinates: 2826425..2827429 (-)
• Length: 334 a.a.
• NCBI ID: WP_013353210.1
• Uniprot ID: A0A9P1NIY9
• Organism: Bacillus amyloliquefaciens DSM 7 = ATCC 23350
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2821425..2832429

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMF_RS34460 (BAMF_2769)	-	2822384..2823016 (+)	633	WP_013353205.1	GNAT family N-acetyltransferase	-
BAMF_RS34465 (BAMF_2770)	-	2823041..2823688 (+)	648	WP_013353206.1	acetoin utilization AcuB family protein	-
BAMF_RS34470 (BAMF_2771)	-	2823685..2824851 (+)	1167	WP_013353207.1	acetoin utilization protein AcuC	-
BAMF_RS34475 (BAMF_2772)	motS	2824861..2825550 (-)	690	WP_041481663.1	flagellar motor protein MotS	-
BAMF_RS34480 (BAMF_2773)	motP	2825540..2826355 (-)	816	WP_013353209.1	flagellar motor protein MotP	-
BAMF_RS34485 (BAMF_2774)	ccpA	2826425..2827429 (-)	1005	WP_013353210.1	catabolite control protein A	Regulator
BAMF_RS34490 (BAMF_2775)	-	2827707..2828783 (-)	1077	WP_013353211.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
BAMF_RS34495 (BAMF_2776)	ytxJ	2829019..2829345 (-)	327	WP_013353212.1	bacillithiol system redox-active protein YtxJ	-
BAMF_RS34500 (BAMF_2777)	-	2829371..2829784 (-)	414	WP_013353213.1	YtxH domain-containing protein	-
BAMF_RS34505 (BAMF_2778)	-	2829817..2830239 (-)	423	WP_013353214.1	DUF948 domain-containing protein	-
BAMF_RS34510 (BAMF_2779)	murC	2830396..2831694 (-)	1299	WP_013353215.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36868.21 Da
• Isoelectric Point: 4.9206

>NTDB_id=33008 BAMF_RS34485 WP_013353210.1 2826425..2827429(-) (ccpA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYAELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMAEPINRSKKLQGYKRALEEAGIAFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGMSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=33008 BAMF_RS34485 WP_013353210.1 2826425..2827429(-) (ccpA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGCATGGCGACTGTTTCCCGCGTCGTAAACGGCAA
TCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGCCTCGGCTACCGCCCGAACGCGGTGGCAA
GAGGACTGGCAAGCAAAAAAACGACTACGGTCGGCGTCATCATCCCTGATATCTCAAGTATTTTTTACGCGGAACTTGCG
CGGGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAATTCAGACCAAAATCTCGAGAAGGAACT
GCACCTGTTAAATACGATGCTCGGTAAACAAGTAGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCCGTTCCGATCGTATTGGCTGCGTCAGTTGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTCAAGCTTTTCATTGATAAGGGGCATCGCGATATCGCATTTGTCTCCGGACC
GATGGCAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGGCATTGCGTTTAACG
AGCAGTTCGTGGCGGAAGGCGATTACACCTATGATTCCGGGATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATCCTTTCTGCGACGGATGAAATGGCTCTCGGCATTATTCATGCGGCCCAGGATCAGGGTATGTCGATTCC
TGACGATCTTGACATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTT
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

3D structure

• AlphaFold DB: A0A9P1NIY9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.03	98.802	0.524
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.904	99.401	0.506