Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NGK_RS10605 | Genome accession | NC_011035 |
| Coordinates | 1950223..1951266 (-) | Length | 347 a.a. |
| NCBI ID | WP_003690200.1 | Uniprot ID | Q53432 |
| Organism | Neisseria gonorrhoeae NCCP11945 | ||
| Function | pseudopilus biogenesis (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1945223..1956266
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGK_RS10590 | - | 1945798..1946082 (+) | 285 | WP_003692093.1 | GIY-YIG nuclease family protein | - |
| NGK_RS10595 (NGK_2346) | yccS | 1946566..1948716 (-) | 2151 | WP_003697785.1 | YccS family putative transporter | - |
| NGK_RS10600 (NGK_2348) | - | 1948833..1950059 (-) | 1227 | WP_003697786.1 | PilT/PilU family type 4a pilus ATPase | - |
| NGK_RS10605 (NGK_2349) | pilT | 1950223..1951266 (-) | 1044 | WP_003690200.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| NGK_RS10610 (NGK_2350) | - | 1951386..1952072 (+) | 687 | WP_003690201.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| NGK_RS10615 (NGK_2351) | - | 1952072..1952479 (+) | 408 | WP_003690202.1 | hypothetical protein | - |
| NGK_RS10620 (NGK_2352) | proC | 1952528..1953319 (+) | 792 | WP_003694504.1 | pyrroline-5-carboxylate reductase | - |
| NGK_RS10625 (NGK_2353) | dksA | 1953468..1953884 (+) | 417 | WP_003692108.1 | RNA polymerase-binding protein DksA | - |
| NGK_RS15585 (NGK_2354) | - | 1953899..1954231 (+) | 333 | WP_187146770.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37940.31 Da Isoelectric Point: 6.8962
>NTDB_id=31248 NGK_RS10605 WP_003690200.1 1950223..1951266(-) (pilT) [Neisseria gonorrhoeae NCCP11945]
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEAARRRAQNSESMSF
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQS
LQSLVRQGLIAPEAARRRAQNSESMSF
Nucleotide
Download Length: 1044 bp
>NTDB_id=31248 NGK_RS10605 WP_003690200.1 1950223..1951266(-) (pilT) [Neisseria gonorrhoeae NCCP11945]
ATGCAGATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGACATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGCAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGCCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAACGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGAGTTCCGCATTGCGCGAAGACCCAGACGTTATCCTTGTCGGCGAGATGCGCGACCCCGAAACCATCGGCTTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCGGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCCGCCGGAGAGAAAGAAATGGTGCGTTCCATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACGATGGACCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGCCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
ATGCAGATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGACATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGCAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGCCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAACGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGAGTTCCGCATTGCGCGAAGACCCAGACGTTATCCTTGTCGGCGAGATGCGCGACCCCGAAACCATCGGCTTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCGGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCCGCCGGAGAGAAAGAAATGGTGCGTTCCATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCAACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCAGGCGAGCGGTATGCAGACGATGGACCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGCCGCACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| pilT | Neisseria meningitidis 8013 |
99.135 |
100 |
0.991 |
| pilT | Acinetobacter baumannii D1279779 |
67.826 |
99.424 |
0.674 |
| pilT | Acinetobacter baumannii strain A118 |
67.826 |
99.424 |
0.674 |
| pilT | Acinetobacter nosocomialis M2 |
67.826 |
99.424 |
0.674 |
| pilT | Acinetobacter baylyi ADP1 |
67.246 |
99.424 |
0.669 |
| pilT | Pseudomonas stutzeri DSM 10701 |
66.957 |
99.424 |
0.666 |
| pilT | Pseudomonas aeruginosa PAK |
66.377 |
99.424 |
0.66 |
| pilT | Legionella pneumophila strain Lp02 |
64.516 |
98.271 |
0.634 |
| pilT | Legionella pneumophila strain ERS1305867 |
64.516 |
98.271 |
0.634 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
64.242 |
95.101 |
0.611 |
| pilT | Vibrio cholerae strain A1552 |
64.242 |
95.101 |
0.611 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.392 |
97.695 |
0.522 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.29 |
99.424 |
0.401 |
| pilU | Vibrio cholerae strain A1552 |
38.329 |
100 |
0.383 |
| pilU | Acinetobacter baylyi ADP1 |
38.439 |
99.712 |
0.383 |