Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | D0S48_RS00235 | Genome accession | NZ_CP031739 |
| Coordinates | 54809..55849 (+) | Length | 346 a.a. |
| NCBI ID | WP_151109310.1 | Uniprot ID | - |
| Organism | Psychrobacillus sp. AK 1817 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 49809..60849
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0S48_RS00225 (D0S48_00225) | - | 51783..53114 (+) | 1332 | WP_191963845.1 | VanW family protein | - |
| D0S48_RS00230 (D0S48_00230) | - | 53140..54798 (+) | 1659 | WP_191963908.1 | GspE/PulE family protein | - |
| D0S48_RS00235 (D0S48_00235) | pilT | 54809..55849 (+) | 1041 | WP_151109310.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| D0S48_RS00240 (D0S48_00240) | - | 55849..57054 (+) | 1206 | WP_151109312.1 | type II secretion system F family protein | - |
| D0S48_RS00245 (D0S48_00245) | - | 57143..57595 (+) | 453 | WP_151109314.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| D0S48_RS00250 (D0S48_00250) | pilM | 57732..58706 (+) | 975 | WP_151109316.1 | type IV pilus biogenesis protein PilM | - |
| D0S48_RS00255 (D0S48_00255) | - | 58706..59296 (+) | 591 | WP_151109317.1 | PilN domain-containing protein | - |
| D0S48_RS00260 (D0S48_00260) | - | 59293..59979 (+) | 687 | WP_151109319.1 | potassium transporter | - |
Sequence
Protein
Download Length: 346 a.a. Molecular weight: 38070.80 Da Isoelectric Point: 5.9959
>NTDB_id=310921 D0S48_RS00235 WP_151109310.1 54809..55849(+) (pilT) [Psychrobacillus sp. AK 1817]
MKNSIIYLLEKSFEDKASDLHLTVGLPPVFRMNGSLKAFGDIQLNTIDTADMLKEVLEPSKIEEFEEKGEIDFSYELPGL
CRFRINAYHQQGQVSIAARMIESKIPAIESLGMPNVLYSLADKPQGLILVTGPTGSGKSTTLASMIDYINTTKAMHIITL
EDPIEYVHKHKKSVINQREVGSDTLSFANGLRAALRQDPDVILVGEMRDLETISTAITAAETGHLVMATLHTSSAPTTID
RIIDVFPPHQQGQIRIQLANVLQGIISQRLFIQNDGMGRVAATEILVQTPSVANLIRNEKVHQIQNVMQTSRALGMHTLE
ASVQSLLNSGKISLEVAKPFLNVGEY
MKNSIIYLLEKSFEDKASDLHLTVGLPPVFRMNGSLKAFGDIQLNTIDTADMLKEVLEPSKIEEFEEKGEIDFSYELPGL
CRFRINAYHQQGQVSIAARMIESKIPAIESLGMPNVLYSLADKPQGLILVTGPTGSGKSTTLASMIDYINTTKAMHIITL
EDPIEYVHKHKKSVINQREVGSDTLSFANGLRAALRQDPDVILVGEMRDLETISTAITAAETGHLVMATLHTSSAPTTID
RIIDVFPPHQQGQIRIQLANVLQGIISQRLFIQNDGMGRVAATEILVQTPSVANLIRNEKVHQIQNVMQTSRALGMHTLE
ASVQSLLNSGKISLEVAKPFLNVGEY
Nucleotide
Download Length: 1041 bp
>NTDB_id=310921 D0S48_RS00235 WP_151109310.1 54809..55849(+) (pilT) [Psychrobacillus sp. AK 1817]
ATGAAAAATTCTATTATTTATTTACTCGAAAAATCTTTTGAGGACAAAGCTTCGGATTTACATCTTACTGTTGGGTTGCC
TCCTGTATTTCGAATGAACGGATCATTAAAAGCTTTTGGAGACATACAGCTAAACACAATCGATACAGCAGATATGTTAA
AAGAAGTATTAGAGCCTTCTAAGATAGAGGAATTTGAAGAAAAAGGAGAAATCGATTTTAGTTATGAGCTGCCAGGTCTA
TGTCGATTCCGTATAAATGCATATCATCAACAAGGGCAGGTATCTATTGCCGCTCGAATGATTGAATCTAAGATTCCTGC
AATAGAGAGCTTGGGAATGCCGAATGTTTTATATTCATTGGCGGACAAGCCTCAGGGTTTAATTCTTGTAACAGGACCAA
CTGGCTCAGGTAAGTCTACAACATTGGCATCTATGATTGACTATATTAATACTACAAAAGCTATGCACATTATTACGTTA
GAGGATCCAATTGAGTATGTTCATAAGCATAAGAAATCAGTAATCAATCAACGAGAAGTAGGGTCGGACACTTTAAGTTT
TGCTAATGGATTAAGAGCTGCTTTAAGGCAAGATCCAGACGTAATCTTAGTTGGAGAGATGAGAGATTTGGAGACAATTT
CCACCGCTATTACGGCAGCGGAAACGGGACATTTAGTAATGGCAACGCTTCACACGAGTAGTGCTCCTACTACAATCGAC
CGAATTATTGATGTGTTTCCTCCACACCAGCAGGGGCAGATTCGTATTCAGCTAGCTAATGTCTTGCAAGGCATTATTTC
TCAAAGATTATTTATCCAAAATGACGGCATGGGGCGTGTGGCGGCAACAGAAATATTAGTTCAAACACCTTCTGTAGCAA
ACCTTATCCGAAATGAAAAAGTACATCAAATCCAGAACGTCATGCAAACGAGTCGAGCATTAGGTATGCATACTTTAGAG
GCATCAGTTCAATCATTATTGAATAGCGGAAAGATTTCTCTAGAAGTAGCTAAGCCCTTTTTAAATGTAGGTGAATATTA
A
ATGAAAAATTCTATTATTTATTTACTCGAAAAATCTTTTGAGGACAAAGCTTCGGATTTACATCTTACTGTTGGGTTGCC
TCCTGTATTTCGAATGAACGGATCATTAAAAGCTTTTGGAGACATACAGCTAAACACAATCGATACAGCAGATATGTTAA
AAGAAGTATTAGAGCCTTCTAAGATAGAGGAATTTGAAGAAAAAGGAGAAATCGATTTTAGTTATGAGCTGCCAGGTCTA
TGTCGATTCCGTATAAATGCATATCATCAACAAGGGCAGGTATCTATTGCCGCTCGAATGATTGAATCTAAGATTCCTGC
AATAGAGAGCTTGGGAATGCCGAATGTTTTATATTCATTGGCGGACAAGCCTCAGGGTTTAATTCTTGTAACAGGACCAA
CTGGCTCAGGTAAGTCTACAACATTGGCATCTATGATTGACTATATTAATACTACAAAAGCTATGCACATTATTACGTTA
GAGGATCCAATTGAGTATGTTCATAAGCATAAGAAATCAGTAATCAATCAACGAGAAGTAGGGTCGGACACTTTAAGTTT
TGCTAATGGATTAAGAGCTGCTTTAAGGCAAGATCCAGACGTAATCTTAGTTGGAGAGATGAGAGATTTGGAGACAATTT
CCACCGCTATTACGGCAGCGGAAACGGGACATTTAGTAATGGCAACGCTTCACACGAGTAGTGCTCCTACTACAATCGAC
CGAATTATTGATGTGTTTCCTCCACACCAGCAGGGGCAGATTCGTATTCAGCTAGCTAATGTCTTGCAAGGCATTATTTC
TCAAAGATTATTTATCCAAAATGACGGCATGGGGCGTGTGGCGGCAACAGAAATATTAGTTCAAACACCTTCTGTAGCAA
ACCTTATCCGAAATGAAAAAGTACATCAAATCCAGAACGTCATGCAAACGAGTCGAGCATTAGGTATGCATACTTTAGAG
GCATCAGTTCAATCATTATTGAATAGCGGAAAGATTTCTCTAGAAGTAGCTAAGCCCTTTTTAAATGTAGGTGAATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
54.489 |
93.353 |
0.509 |
| pilT | Pseudomonas aeruginosa PAK |
51.198 |
96.532 |
0.494 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.898 |
96.532 |
0.491 |
| pilT | Neisseria meningitidis 8013 |
49.701 |
96.532 |
0.48 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.61 |
94.798 |
0.48 |
| pilT | Vibrio cholerae strain A1552 |
50.61 |
94.798 |
0.48 |
| pilT | Acinetobacter nosocomialis M2 |
49.401 |
96.532 |
0.477 |
| pilT | Acinetobacter baylyi ADP1 |
49.401 |
96.532 |
0.477 |
| pilT | Acinetobacter baumannii D1279779 |
49.401 |
96.532 |
0.477 |
| pilT | Acinetobacter baumannii strain A118 |
49.401 |
96.532 |
0.477 |
| pilT | Neisseria gonorrhoeae MS11 |
49.102 |
96.532 |
0.474 |
| pilT | Legionella pneumophila strain Lp02 |
48.949 |
96.243 |
0.471 |
| pilT | Legionella pneumophila strain ERS1305867 |
48.949 |
96.243 |
0.471 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.818 |
95.376 |
0.399 |
| pilU | Vibrio cholerae strain A1552 |
41.824 |
91.908 |
0.384 |
| pilU | Acinetobacter baylyi ADP1 |
39.759 |
95.954 |
0.382 |