Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GLOV_RS08210 | Genome accession | NC_010814 |
| Coordinates | 1762686..1763777 (+) | Length | 363 a.a. |
| NCBI ID | WP_012469712.1 | Uniprot ID | B3EAD2 |
| Organism | Trichlorobacter lovleyi SZ | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1757686..1768777
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GLOV_RS08195 (Glov_1651) | - | 1758148..1760022 (+) | 1875 | WP_012469709.1 | protein O-mannosyl-transferase family | - |
| GLOV_RS08200 (Glov_1652) | aroE | 1760012..1760893 (+) | 882 | WP_012469710.1 | shikimate dehydrogenase | - |
| GLOV_RS08205 (Glov_1653) | pilB | 1760967..1762673 (+) | 1707 | WP_012469711.1 | type IV-A pilus assembly ATPase PilB | - |
| GLOV_RS08210 (Glov_1654) | pilT | 1762686..1763777 (+) | 1092 | WP_012469712.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GLOV_RS08215 (Glov_1655) | - | 1763806..1765020 (+) | 1215 | WP_012469713.1 | type II secretion system F family protein | - |
| GLOV_RS08220 (Glov_1656) | - | 1765024..1766673 (+) | 1650 | WP_012469714.1 | nitrogen regulation protein NR(II) | - |
| GLOV_RS08225 (Glov_1657) | - | 1766648..1768018 (+) | 1371 | WP_012469715.1 | sigma-54 dependent transcriptional regulator | - |
Sequence
Protein
Download Length: 363 a.a. Molecular weight: 40617.94 Da Isoelectric Point: 7.4814
>NTDB_id=31047 GLOV_RS08210 WP_012469712.1 1762686..1763777(+) (pilT) [Trichlorobacter lovleyi SZ]
MANLHELLKTLVEAGGSDLHITTNTQPQIRVDGKLQKLDIPPLNAVETKQLCYSVLTDTQKHKFEEENELDLSFGVKGLS
RFRGNIFVQRGAVAGVFRVIPYKILSFEELGLPPVVKELAEKPRGLILVTGPTGSGKSTTLASIIDFININRKEHIVTIE
DPIEYLHPHKGCLVNQREVGADTKGFKNALKYVLRQDPDVVLVGELRDLETIEAALTLSETGHLCLATLHTNSCAQTINR
IVDVFPPYQQTQIRAQLSFVLEGVMSQALIPKIGGGRVMSLEIMVPNPAIRNLIREDKVHQIYSQMQVGQEKFGMQTMNQ
SLYSLFSRRLITLDDAMGRTSDPDELRQMINNPTMGMRQQPRR
MANLHELLKTLVEAGGSDLHITTNTQPQIRVDGKLQKLDIPPLNAVETKQLCYSVLTDTQKHKFEEENELDLSFGVKGLS
RFRGNIFVQRGAVAGVFRVIPYKILSFEELGLPPVVKELAEKPRGLILVTGPTGSGKSTTLASIIDFININRKEHIVTIE
DPIEYLHPHKGCLVNQREVGADTKGFKNALKYVLRQDPDVVLVGELRDLETIEAALTLSETGHLCLATLHTNSCAQTINR
IVDVFPPYQQTQIRAQLSFVLEGVMSQALIPKIGGGRVMSLEIMVPNPAIRNLIREDKVHQIYSQMQVGQEKFGMQTMNQ
SLYSLFSRRLITLDDAMGRTSDPDELRQMINNPTMGMRQQPRR
Nucleotide
Download Length: 1092 bp
>NTDB_id=31047 GLOV_RS08210 WP_012469712.1 1762686..1763777(+) (pilT) [Trichlorobacter lovleyi SZ]
ATGGCTAATCTTCACGAACTGCTGAAAACCCTGGTGGAAGCAGGTGGGTCTGATCTTCATATTACCACTAATACCCAGCC
TCAGATCAGGGTGGATGGTAAGCTGCAAAAGCTTGATATACCACCGTTAAATGCGGTTGAAACCAAGCAACTCTGCTATT
CGGTGCTGACTGACACCCAAAAGCACAAATTCGAAGAGGAAAACGAGCTTGATCTTTCTTTCGGTGTCAAGGGGTTGTCC
CGCTTCCGGGGAAACATCTTTGTGCAGCGCGGTGCGGTGGCAGGGGTTTTCCGGGTTATTCCCTACAAGATCTTGTCTTT
TGAAGAGCTTGGTCTGCCACCGGTTGTCAAGGAGTTGGCAGAAAAACCCCGTGGGCTGATTCTGGTGACCGGTCCTACCG
GTAGCGGTAAATCAACTACCCTGGCTTCAATCATTGATTTCATTAACATTAACCGTAAAGAACATATTGTTACCATTGAG
GATCCGATAGAATATCTGCATCCCCACAAAGGCTGCCTGGTGAACCAGCGTGAGGTCGGAGCCGACACCAAGGGGTTTAA
AAACGCACTGAAGTACGTTCTGCGTCAGGATCCAGACGTTGTGCTGGTGGGAGAGTTGCGGGATCTGGAAACGATTGAGG
CTGCCCTGACCCTGTCCGAAACCGGCCACCTCTGTCTGGCTACGCTGCATACCAACTCCTGCGCCCAGACCATCAACCGG
ATTGTGGATGTATTTCCCCCCTATCAGCAGACCCAGATTCGTGCCCAGCTCTCATTTGTGCTGGAGGGGGTTATGTCCCA
GGCCCTGATCCCCAAGATTGGCGGTGGCAGGGTTATGTCACTTGAAATTATGGTGCCGAACCCGGCAATCCGCAACCTTA
TCAGGGAAGACAAGGTCCACCAGATCTACTCCCAGATGCAGGTTGGCCAGGAGAAGTTTGGGATGCAAACCATGAACCAG
TCGCTCTATTCGCTTTTTTCCCGGAGACTGATTACCCTTGATGATGCCATGGGGCGCACCTCTGATCCTGACGAGTTGAG
ACAGATGATTAACAATCCTACGATGGGGATGCGTCAGCAGCCGCGCCGATAG
ATGGCTAATCTTCACGAACTGCTGAAAACCCTGGTGGAAGCAGGTGGGTCTGATCTTCATATTACCACTAATACCCAGCC
TCAGATCAGGGTGGATGGTAAGCTGCAAAAGCTTGATATACCACCGTTAAATGCGGTTGAAACCAAGCAACTCTGCTATT
CGGTGCTGACTGACACCCAAAAGCACAAATTCGAAGAGGAAAACGAGCTTGATCTTTCTTTCGGTGTCAAGGGGTTGTCC
CGCTTCCGGGGAAACATCTTTGTGCAGCGCGGTGCGGTGGCAGGGGTTTTCCGGGTTATTCCCTACAAGATCTTGTCTTT
TGAAGAGCTTGGTCTGCCACCGGTTGTCAAGGAGTTGGCAGAAAAACCCCGTGGGCTGATTCTGGTGACCGGTCCTACCG
GTAGCGGTAAATCAACTACCCTGGCTTCAATCATTGATTTCATTAACATTAACCGTAAAGAACATATTGTTACCATTGAG
GATCCGATAGAATATCTGCATCCCCACAAAGGCTGCCTGGTGAACCAGCGTGAGGTCGGAGCCGACACCAAGGGGTTTAA
AAACGCACTGAAGTACGTTCTGCGTCAGGATCCAGACGTTGTGCTGGTGGGAGAGTTGCGGGATCTGGAAACGATTGAGG
CTGCCCTGACCCTGTCCGAAACCGGCCACCTCTGTCTGGCTACGCTGCATACCAACTCCTGCGCCCAGACCATCAACCGG
ATTGTGGATGTATTTCCCCCCTATCAGCAGACCCAGATTCGTGCCCAGCTCTCATTTGTGCTGGAGGGGGTTATGTCCCA
GGCCCTGATCCCCAAGATTGGCGGTGGCAGGGTTATGTCACTTGAAATTATGGTGCCGAACCCGGCAATCCGCAACCTTA
TCAGGGAAGACAAGGTCCACCAGATCTACTCCCAGATGCAGGTTGGCCAGGAGAAGTTTGGGATGCAAACCATGAACCAG
TCGCTCTATTCGCTTTTTTCCCGGAGACTGATTACCCTTGATGATGCCATGGGGCGCACCTCTGATCCTGACGAGTTGAG
ACAGATGATTAACAATCCTACGATGGGGATGCGTCAGCAGCCGCGCCGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.562 |
98.072 |
0.496 |
| pilT | Legionella pneumophila strain Lp02 |
54.545 |
90.909 |
0.496 |
| pilT | Legionella pneumophila strain ERS1305867 |
54.545 |
90.909 |
0.496 |
| pilT | Pseudomonas aeruginosa PAK |
51.744 |
94.766 |
0.49 |
| pilT | Acinetobacter nosocomialis M2 |
50.581 |
94.766 |
0.479 |
| pilT | Acinetobacter baumannii strain A118 |
50.291 |
94.766 |
0.477 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.291 |
94.766 |
0.477 |
| pilT | Acinetobacter baumannii D1279779 |
50.291 |
94.766 |
0.477 |
| pilT | Acinetobacter baylyi ADP1 |
50 |
94.766 |
0.474 |
| pilT | Neisseria meningitidis 8013 |
48.397 |
94.49 |
0.457 |
| pilT | Neisseria gonorrhoeae MS11 |
47.953 |
94.215 |
0.452 |
| pilT | Vibrio cholerae strain A1552 |
48.632 |
90.634 |
0.441 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.632 |
90.634 |
0.441 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.667 |
95.868 |
0.399 |
| pilU | Vibrio cholerae strain A1552 |
41.092 |
95.868 |
0.394 |
| pilU | Acinetobacter baylyi ADP1 |
40 |
96.419 |
0.386 |