Detailed information NTG0031001

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: SYO3AOP1_RS08915
• Genome accession: NC_010730
• Coordinates: 1800869..1801957 (+)
• Length: 362 a.a.
• NCBI ID: WP_012460396.1
• Uniprot ID: -
• Organism: Sulfurihydrogenibium sp. YO3AOP1
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1795869..1806957

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SYO3AOP1_RS08895 (SYO3AOP1_1740)	-	1796472..1797002 (-)	531	WP_012460392.1	DUF29 domain-containing protein	-
SYO3AOP1_RS08900 (SYO3AOP1_1741)	-	1797005..1797529 (-)	525	WP_012460393.1	DUF29 domain-containing protein	-
SYO3AOP1_RS08905 (SYO3AOP1_1742)	accC	1797604..1798959 (-)	1356	WP_012460394.1	acetyl-CoA carboxylase biotin carboxylase subunit	-
SYO3AOP1_RS08910 (SYO3AOP1_1743)	-	1799073..1800758 (+)	1686	WP_281340752.1	GspE/PulE family protein	-
SYO3AOP1_RS08915 (SYO3AOP1_1744)	pilT	1800869..1801957 (+)	1089	WP_012460396.1	type IV pilus twitching motility protein PilT	Machinery gene
SYO3AOP1_RS08920 (SYO3AOP1_1745)	-	1801957..1803177 (+)	1221	WP_012460397.1	type II secretion system F family protein	-
SYO3AOP1_RS08925 (SYO3AOP1_1746)	mnmA	1803177..1804235 (+)	1059	WP_012460398.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 362 a.a.
• Molecular weight: 40883.49 Da
• Isoelectric Point: 7.2368

>NTDB_id=31001 SYO3AOP1_RS08915 WP_012460396.1 1800869..1801957(+) (pilT) [Sulfurihydrogenibium sp. YO3AOP1]
MEEIKSFRIDEIAREAVDRNATDIHITAGVPPIIRVDGRLIPLIGYPPMTPKDTQEFIYSFMNEKQKKTFEEKKELDFSF
GIKGIGRFRVNVFYQRGTVAAALRRIPYEIKPMEELGLIPKVRDLCHLSMGLVLVTGPTGSGKTTTLASMIDYINANFPH
HIITIEDPIEYIYQHKKSVIAQRELGTDTDSFALALKYALREDPDVILVGEMRDLETIRAALTAAETGHLVFGTLHTNTA
VQTINRIINVFPMEEQDQVRTELSFVLQGVISQRLLPKIGGGRVLIHEVMIPNIAIRNLIRENKVHQIYGLMQTGQAESG
MQTMNQSIIKALQRKLITVEDAFRISPDPEELKRMISTFGVK

Nucleotide

• Length: 1089 bp

>NTDB_id=31001 SYO3AOP1_RS08915 WP_012460396.1 1800869..1801957(+) (pilT) [Sulfurihydrogenibium sp. YO3AOP1]
ATGGAAGAAATTAAATCTTTTAGAATTGATGAAATAGCAAGAGAAGCTGTTGATAGAAATGCCACCGACATACATATTAC
GGCAGGAGTTCCACCTATAATAAGGGTAGATGGTAGATTGATTCCATTAATCGGATATCCACCAATGACACCAAAGGATA
CTCAAGAATTTATATATTCATTTATGAATGAAAAACAGAAGAAGACTTTTGAAGAAAAGAAAGAACTTGATTTTTCTTTT
GGAATAAAAGGCATTGGAAGGTTTAGGGTAAATGTATTTTATCAAAGAGGCACAGTGGCAGCTGCACTGAGAAGAATTCC
ATATGAAATTAAACCAATGGAAGAATTAGGTTTAATACCTAAGGTTAGAGACTTGTGTCATCTTTCTATGGGACTAGTTC
TTGTTACTGGTCCAACTGGTTCAGGTAAAACTACAACCTTAGCATCCATGATAGATTATATAAACGCAAACTTTCCTCAC
CATATAATAACTATCGAGGACCCTATAGAATATATATACCAACATAAAAAATCCGTCATAGCACAAAGAGAATTAGGAAC
TGATACAGATTCTTTTGCTCTTGCATTAAAATATGCTTTAAGGGAAGACCCGGACGTTATACTTGTCGGTGAAATGAGAG
ATTTAGAAACTATAAGGGCAGCATTGACTGCAGCAGAAACTGGTCACTTAGTATTTGGAACATTACATACAAACACGGCT
GTTCAAACTATCAACAGAATAATAAACGTATTCCCTATGGAAGAACAAGATCAAGTAAGAACAGAATTAAGCTTTGTTCT
TCAAGGTGTTATATCTCAAAGACTTTTACCTAAAATTGGTGGTGGAAGAGTTCTTATTCATGAAGTCATGATTCCAAATA
TTGCAATAAGAAACTTGATTAGAGAAAATAAAGTTCATCAAATTTATGGTCTAATGCAAACAGGTCAGGCAGAGAGTGGT
ATGCAAACAATGAATCAATCAATAATAAAAGCATTGCAAAGAAAGCTAATAACCGTCGAGGATGCATTTAGAATTTCTCC
AGATCCTGAAGAATTAAAAAGAATGATATCAACTTTTGGAGTTAAGTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (12-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Acinetobacter baylyi ADP1	55.523	95.028	0.528
pilT	Acinetobacter nosocomialis M2	54.942	95.028	0.522
pilT	Acinetobacter baumannii strain A118	54.942	95.028	0.522
pilT	Acinetobacter baumannii D1279779	54.942	95.028	0.522
pilT	Legionella pneumophila strain ERS1305867	55.689	92.265	0.514
pilT	Legionella pneumophila strain Lp02	55.689	92.265	0.514
pilT	Pseudomonas aeruginosa PAK	53.488	95.028	0.508
pilT	Pseudomonas stutzeri DSM 10701	53.198	95.028	0.506
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	52.011	96.133	0.5
pilT	Neisseria meningitidis 8013	52.395	92.265	0.483
pilT	Neisseria gonorrhoeae MS11	52.395	92.265	0.483
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	52.252	91.989	0.481
pilT	Vibrio cholerae strain A1552	52.252	91.989	0.481
pilU	Pseudomonas stutzeri DSM 10701	44.253	96.133	0.425
pilU	Acinetobacter baylyi ADP1	39.941	93.37	0.373
pilU	Vibrio cholerae strain A1552	39.823	93.646	0.373