Detailed information NTG0304612

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: DV119_RS01865
• Genome accession: NZ_CP031245
• Coordinates: 309700..310026 (-)
• Length: 108 a.a.
• NCBI ID: WP_000738632.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain M16808
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 304700..315026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV119_RS01825	rnpA	304717..305088 (-)	372	WP_000739246.1	ribonuclease P protein component	-
DV119_RS11985	-	305105..305236 (-)	132	WP_000768904.1	hypothetical protein	-
DV119_RS01830	-	305237..306427 (-)	1191	WP_000167766.1	acetate kinase	-
DV119_RS01835	comYH	306478..307431 (-)	954	WP_050308921.1	class I SAM-dependent methyltransferase	Machinery gene
DV119_RS01840	-	307492..308086 (-)	595	Protein_314	class I SAM-dependent methyltransferase	-
DV119_RS01845	comGG/cglG	308223..308636 (-)	414	WP_050102600.1	competence type IV pilus minor pilin ComGG	Machinery gene
DV119_RS01850	comGF/cglF	308614..309075 (-)	462	WP_000250544.1	competence type IV pilus minor pilin ComGF	Machinery gene
DV119_RS01855	comGE/cglE	309038..309340 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
DV119_RS01860	comGD/cglD	309303..309707 (-)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
DV119_RS01865	comGC/cglC	309700..310026 (-)	327	WP_000738632.1	comG operon protein ComGC	Machinery gene
DV119_RS01870	comGB/cglB	310028..311044 (-)	1017	WP_114880773.1	competence type IV pilus assembly protein ComGB	Machinery gene
DV119_RS01875	comGA/cglA/cilD	310992..311933 (-)	942	WP_000249549.1	competence type IV pilus ATPase ComGA	Machinery gene
DV119_RS01880	-	312009..312374 (-)	366	WP_000286415.1	DUF1033 family protein	-
DV119_RS01885	-	312525..313583 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
DV119_RS01890	nagA	313746..314897 (-)	1152	WP_001134457.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12180.34 Da
• Isoelectric Point: 10.0305

>NTDB_id=304612 DV119_RS01865 WP_000738632.1 309700..310026(-) (comGC/cglC) [Streptococcus pneumoniae strain M16808]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKD
DGRITEEQVKAYKEYNDKNGGANRKVND

Nucleotide

• Length: 327 bp

>NTDB_id=304612 DV119_RS01865 WP_000738632.1 309700..310026(-) (comGC/cglC) [Streptococcus pneumoniae strain M16808]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAC
GATGGGCGAATCACGGAAGAACAGGTTAAAGCTTATAAAGAATACAATGATAAAAATGGAGGAGCAAATCGTAAAGTCAA
TGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae TIGR4	96.296	100	0.963
comGC/cglC	Streptococcus pneumoniae Rx1	95.37	100	0.954
comGC/cglC	Streptococcus pneumoniae D39	95.37	100	0.954
comGC/cglC	Streptococcus pneumoniae R6	95.37	100	0.954
comGC/cglC	Streptococcus mitis SK321	92.593	100	0.926
comGC/cglC	Streptococcus mitis NCTC 12261	91.919	91.667	0.843
comYC	Streptococcus gordonii str. Challis substr. CH1	66.99	95.37	0.639
comYC	Streptococcus mutans UA159	61.765	94.444	0.583
comYC	Streptococcus mutans UA140	61.765	94.444	0.583
comGC	Lactococcus lactis subsp. cremoris KW2	55.882	94.444	0.528
comYC	Streptococcus suis isolate S10	66.667	75	0.5
comGC	Staphylococcus aureus MW2	48.837	79.63	0.389
comGC	Staphylococcus aureus N315	48.837	79.63	0.389
comGC	Latilactobacillus sakei subsp. sakei 23K	45.349	79.63	0.361