Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DLJ51_RS10410 Genome accession   NZ_CP029560
Coordinates   2143814..2144581 (+) Length   255 a.a.
NCBI ID   WP_019770069.1    Uniprot ID   U2J9S1
Organism   Streptococcus sobrinus strain NIDR 6715-7     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2138814..2149581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLJ51_RS10400 (DLJ51_10400) rlmH 2141870..2142349 (-) 480 WP_019770428.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DLJ51_RS10405 (DLJ51_10405) htrA 2142546..2143754 (+) 1209 WP_109982804.1 trypsin-like peptidase domain-containing protein Regulator
  DLJ51_RS10410 (DLJ51_10410) spo0J 2143814..2144581 (+) 768 WP_019770069.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29311.77 Da        Isoelectric Point: 10.0064

>NTDB_id=293603 DLJ51_RS10410 WP_019770069.1 2143814..2144581(+) (spo0J) [Streptococcus sobrinus strain NIDR 6715-7]
MTVELKELKLSDISPNPFQPRLTFKQEELEELADSIKENGLIQPIIVRKSAVFGYELIAGERRFRACQLAQLETIPAIIK
ELSDQDSRIQTIIENLQRSDLNPIEEAKAYRNLIETNRMTHEEIAKYMGKSRPYITNFLRLLNLSAPLQKALEDGSLSSG
HARLLLGMRDQEQEAWLNKIRDNKLSVRELERQSKPRTKQKKAKQTNLFKKDLEENLSRALGLPVNLSMTKKQAGKLTIT
FSSQDDLNRIINKLN

Nucleotide


Download         Length: 768 bp        

>NTDB_id=293603 DLJ51_RS10410 WP_019770069.1 2143814..2144581(+) (spo0J) [Streptococcus sobrinus strain NIDR 6715-7]
ATGACAGTAGAATTAAAAGAATTGAAATTAAGCGATATCTCACCCAATCCCTTTCAACCCCGCTTAACTTTTAAGCAGGA
GGAGTTGGAGGAGCTGGCCGATTCCATCAAAGAAAACGGCCTGATTCAACCCATTATTGTCCGAAAATCAGCTGTCTTTG
GCTATGAATTGATAGCTGGCGAACGACGTTTTCGAGCCTGCCAATTGGCGCAATTAGAGACTATTCCGGCTATTATCAAA
GAACTTTCAGATCAAGACAGTCGCATTCAGACCATCATTGAAAATTTGCAACGATCTGACCTCAATCCCATTGAGGAGGC
CAAGGCCTACCGAAATCTGATTGAAACCAATCGGATGACCCATGAAGAAATCGCTAAGTACATGGGTAAATCGCGTCCCT
ATATCACTAACTTTTTGCGACTCTTGAATCTATCTGCTCCTTTACAAAAAGCTCTTGAAGACGGCAGCCTATCTTCTGGC
CATGCCCGTCTCCTCTTAGGAATGAGAGACCAAGAACAAGAGGCTTGGCTGAACAAGATTAGAGACAATAAGTTGTCTGT
CAGAGAATTAGAAAGACAGTCAAAACCACGGACCAAGCAAAAGAAGGCGAAACAAACCAATCTCTTCAAGAAAGATTTAG
AAGAAAATCTATCAAGAGCTCTCGGCTTGCCGGTCAATCTCTCAATGACCAAAAAGCAGGCTGGCAAGTTGACCATTACC
TTTTCCTCCCAAGATGACTTGAACAGAATTATCAACAAGCTTAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB U2J9S1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

60.156

100

0.604


Multiple sequence alignment