Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | FTN_RS08330 | Genome accession | NC_008601 |
| Coordinates | 1732817..1733845 (-) | Length | 342 a.a. |
| NCBI ID | WP_003035107.1 | Uniprot ID | A0A6I4RYE3 |
| Organism | Francisella tularensis subsp. novicida U112 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1727817..1738845
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FTN_RS08305 (FTN_1618) | - | 1727838..1728719 (-) | 882 | WP_003041213.1 | TIGR01777 family oxidoreductase | - |
| FTN_RS08310 (FTN_1619) | - | 1728955..1730331 (+) | 1377 | WP_011733726.1 | cytochrome ubiquinol oxidase subunit I | - |
| FTN_RS08315 (FTN_1620) | - | 1730335..1731297 (+) | 963 | WP_003035105.1 | cytochrome d ubiquinol oxidase subunit II | - |
| FTN_RS08320 | - | 1731308..1731754 (+) | 447 | WP_003041217.1 | DUF3429 domain-containing protein | - |
| FTN_RS09375 (FTN_1621) | - | 1731751..1732737 (+) | 987 | WP_011733727.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FTN_RS08330 (FTN_1622) | pilT | 1732817..1733845 (-) | 1029 | WP_003035107.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FTN_RS08335 (FTN_1623) | acnA | 1733940..1736753 (-) | 2814 | WP_003037673.1 | aconitate hydratase AcnA | - |
| FTN_RS08340 (FTN_1624) | - | 1736858..1737736 (-) | 879 | WP_003019812.1 | Dyp-type peroxidase | - |
| FTN_RS08345 (FTN_1625) | - | 1737806..1738183 (+) | 378 | WP_003017296.1 | GtrA family protein | - |
Sequence
Protein
Download Length: 342 a.a. Molecular weight: 38067.83 Da Isoelectric Point: 6.8391
>NTDB_id=26996 FTN_RS08330 WP_003035107.1 1732817..1733845(-) (pilT) [Francisella tularensis subsp. novicida U112]
MIRKLLTLCVQKKASDLHLSSGCKAKYRIDGDLIDIESSPVLNDKMISQMLLEIMTDDQKDELIETYECDFSIDDRDNDA
RFRVNAFFHNRGYGAVFRRLENTIPTLDQFGAPRILKEVQAKKGGLILVTGPTGSGKSSTLAALVNEINHKEDSHILTIE
DPVEFVHTSQRSLVNQREVKRDTKSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVAAYEVLISNTGIRNMIKENKLSQIYTALQTGTAKGMATMEQS
IENLLKAGTITPEEAAKYIVVR
MIRKLLTLCVQKKASDLHLSSGCKAKYRIDGDLIDIESSPVLNDKMISQMLLEIMTDDQKDELIETYECDFSIDDRDNDA
RFRVNAFFHNRGYGAVFRRLENTIPTLDQFGAPRILKEVQAKKGGLILVTGPTGSGKSSTLAALVNEINHKEDSHILTIE
DPVEFVHTSQRSLVNQREVKRDTKSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVAAYEVLISNTGIRNMIKENKLSQIYTALQTGTAKGMATMEQS
IENLLKAGTITPEEAAKYIVVR
Nucleotide
Download Length: 1029 bp
>NTDB_id=26996 FTN_RS08330 WP_003035107.1 1732817..1733845(-) (pilT) [Francisella tularensis subsp. novicida U112]
ATGATAAGAAAATTACTAACTCTTTGTGTGCAAAAAAAAGCCTCTGATCTACATTTATCCTCTGGTTGTAAGGCTAAATA
TAGAATAGATGGAGATTTGATTGATATTGAATCTTCACCTGTATTAAATGATAAGATGATTTCTCAGATGCTTTTAGAAA
TCATGACAGATGATCAAAAGGATGAGCTGATAGAAACCTACGAATGTGATTTTTCTATAGATGATAGAGATAATGATGCG
AGATTTAGGGTAAATGCTTTTTTCCATAACCGTGGTTATGGCGCGGTATTTCGTCGTTTAGAGAATACTATTCCAACGTT
AGATCAATTTGGAGCACCAAGAATTCTTAAAGAAGTTCAAGCTAAAAAAGGTGGCTTAATTCTAGTAACAGGACCCACAG
GTTCAGGTAAGAGTAGTACATTGGCAGCATTAGTCAATGAAATAAATCATAAGGAAGATTCTCATATTCTAACTATTGAG
GATCCAGTAGAATTTGTTCATACAAGTCAAAGATCACTAGTAAACCAACGTGAGGTTAAAAGAGATACAAAAAGCTTTAA
TGCGGCTCTTAAATCAGCACTAAGGGAGGATCCTGATTGTATTCTAGTTGGAGAGATGCGTGATTTAGAAACTATTAGAT
TAGCACTAGAGGCAGCTGAAACTGGGCATTTGGTTTTAGGGACATTACATACAATGTCAGCTATAAAAACTGTTGATAGA
GTAATATCTGTATTTCCACCTGCTGAACAGGAGCTTGTACGTAACATGCTTGCGGAATCATTACAAATCGTTATATCTCA
ACGTTTACTTAAACGTAAGGGCGGCGGACGTGTCGCAGCATATGAAGTTCTTATTTCAAATACTGGTATTAGAAATATGA
TTAAAGAAAATAAACTTTCGCAAATTTACACCGCACTACAAACTGGAACAGCTAAGGGAATGGCGACAATGGAACAGAGC
ATTGAGAATCTTCTTAAGGCTGGAACAATTACACCAGAAGAAGCCGCTAAATACATTGTAGTAAGATAA
ATGATAAGAAAATTACTAACTCTTTGTGTGCAAAAAAAAGCCTCTGATCTACATTTATCCTCTGGTTGTAAGGCTAAATA
TAGAATAGATGGAGATTTGATTGATATTGAATCTTCACCTGTATTAAATGATAAGATGATTTCTCAGATGCTTTTAGAAA
TCATGACAGATGATCAAAAGGATGAGCTGATAGAAACCTACGAATGTGATTTTTCTATAGATGATAGAGATAATGATGCG
AGATTTAGGGTAAATGCTTTTTTCCATAACCGTGGTTATGGCGCGGTATTTCGTCGTTTAGAGAATACTATTCCAACGTT
AGATCAATTTGGAGCACCAAGAATTCTTAAAGAAGTTCAAGCTAAAAAAGGTGGCTTAATTCTAGTAACAGGACCCACAG
GTTCAGGTAAGAGTAGTACATTGGCAGCATTAGTCAATGAAATAAATCATAAGGAAGATTCTCATATTCTAACTATTGAG
GATCCAGTAGAATTTGTTCATACAAGTCAAAGATCACTAGTAAACCAACGTGAGGTTAAAAGAGATACAAAAAGCTTTAA
TGCGGCTCTTAAATCAGCACTAAGGGAGGATCCTGATTGTATTCTAGTTGGAGAGATGCGTGATTTAGAAACTATTAGAT
TAGCACTAGAGGCAGCTGAAACTGGGCATTTGGTTTTAGGGACATTACATACAATGTCAGCTATAAAAACTGTTGATAGA
GTAATATCTGTATTTCCACCTGCTGAACAGGAGCTTGTACGTAACATGCTTGCGGAATCATTACAAATCGTTATATCTCA
ACGTTTACTTAAACGTAAGGGCGGCGGACGTGTCGCAGCATATGAAGTTCTTATTTCAAATACTGGTATTAGAAATATGA
TTAAAGAAAATAAACTTTCGCAAATTTACACCGCACTACAAACTGGAACAGCTAAGGGAATGGCGACAATGGAACAGAGC
ATTGAGAATCTTCTTAAGGCTGGAACAATTACACCAGAAGAAGCCGCTAAATACATTGTAGTAAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii D1279779 |
56.287 |
97.661 |
0.55 |
| pilT | Acinetobacter baumannii strain A118 |
56.287 |
97.661 |
0.55 |
| pilT | Acinetobacter nosocomialis M2 |
56.287 |
97.661 |
0.55 |
| pilT | Legionella pneumophila strain Lp02 |
54.734 |
98.83 |
0.541 |
| pilT | Legionella pneumophila strain ERS1305867 |
54.734 |
98.83 |
0.541 |
| pilT | Neisseria meningitidis 8013 |
54.303 |
98.538 |
0.535 |
| pilT | Neisseria gonorrhoeae MS11 |
54.303 |
98.538 |
0.535 |
| pilT | Pseudomonas aeruginosa PAK |
54.79 |
97.661 |
0.535 |
| pilT | Acinetobacter baylyi ADP1 |
55.319 |
96.199 |
0.532 |
| pilT | Vibrio cholerae strain A1552 |
53.846 |
98.83 |
0.532 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
53.846 |
98.83 |
0.532 |
| pilT | Pseudomonas stutzeri DSM 10701 |
54.192 |
97.661 |
0.529 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.317 |
96.784 |
0.439 |
| pilU | Acinetobacter baylyi ADP1 |
39.403 |
97.953 |
0.386 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.039 |
97.368 |
0.38 |
| pilU | Vibrio cholerae strain A1552 |
39.198 |
94.737 |
0.371 |