Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | KSH_RS07885 | Genome accession | NZ_CP024180 |
| Coordinates | 1778564..1779613 (+) | Length | 349 a.a. |
| NCBI ID | WP_099808388.1 | Uniprot ID | - |
| Organism | Moraxella osloensis strain KSH | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1773564..1784613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KSH_RS07865 (KSH_07865) | truD | 1773826..1774914 (+) | 1089 | WP_099808386.1 | tRNA pseudouridine(13) synthase TruD | - |
| KSH_RS07870 (KSH_07870) | - | 1774949..1776298 (-) | 1350 | WP_099808387.1 | diguanylate cyclase | - |
| KSH_RS07875 (KSH_07875) | - | 1776650..1777174 (-) | 525 | WP_007117192.1 | C40 family peptidase | - |
| KSH_RS07880 (KSH_07880) | - | 1777600..1778325 (-) | 726 | WP_198510937.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| KSH_RS07885 (KSH_07885) | pilT | 1778564..1779613 (+) | 1050 | WP_099808388.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| KSH_RS07890 (KSH_07890) | pilU | 1779675..1780826 (+) | 1152 | WP_099808389.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| KSH_RS07895 (KSH_07895) | - | 1780897..1781421 (-) | 525 | WP_099808390.1 | GNAT family N-acetyltransferase | - |
| KSH_RS07900 (KSH_07900) | ribF | 1781546..1782559 (+) | 1014 | WP_099808391.1 | riboflavin biosynthesis protein RibF | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 38945.71 Da Isoelectric Point: 7.2532
>NTDB_id=252800 KSH_RS07885 WP_099808388.1 1778564..1779613(+) (pilT) [Moraxella osloensis strain KSH]
MAKELSIDDLLRFAFKNKASDLHISAGLPPMIRVDGEITKINMPPLDHQKVHSLIYDIMNDKQRADYEEFFETDFSFEIP
NVARFRVNAFNQNRGAGAVFRTIPSEVLTMEQLGMGPIFEKISNYKRGVVLVTGPTGSGKSTTLAAMINYINETRKKHIL
TIEDPIEFVHQSKKSLINQREVHRDTLSFDAALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKT
IDRVVDVFPAAEKDMIRAMLSESLQAVISQSLLKRQTGGRVAAHEIMIGTPAIRNLIRENKVAQMYSAIQTSAGDGMTTL
DQSLRELVNKGVISKESARQYAKQPENFM
MAKELSIDDLLRFAFKNKASDLHISAGLPPMIRVDGEITKINMPPLDHQKVHSLIYDIMNDKQRADYEEFFETDFSFEIP
NVARFRVNAFNQNRGAGAVFRTIPSEVLTMEQLGMGPIFEKISNYKRGVVLVTGPTGSGKSTTLAAMINYINETRKKHIL
TIEDPIEFVHQSKKSLINQREVHRDTLSFDAALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKT
IDRVVDVFPAAEKDMIRAMLSESLQAVISQSLLKRQTGGRVAAHEIMIGTPAIRNLIRENKVAQMYSAIQTSAGDGMTTL
DQSLRELVNKGVISKESARQYAKQPENFM
Nucleotide
Download Length: 1050 bp
>NTDB_id=252800 KSH_RS07885 WP_099808388.1 1778564..1779613(+) (pilT) [Moraxella osloensis strain KSH]
ATGGCAAAGGAATTATCGATTGACGATTTGTTGCGTTTTGCATTCAAAAATAAAGCCTCTGACTTACACATTTCAGCAGG
CTTACCGCCGATGATTCGGGTAGATGGTGAAATCACCAAAATCAACATGCCGCCGCTTGATCACCAAAAAGTGCATAGTT
TGATTTATGACATCATGAACGACAAACAACGTGCCGATTATGAAGAGTTTTTTGAAACCGATTTTTCGTTTGAAATTCCC
AATGTGGCGCGCTTTCGTGTCAATGCCTTTAACCAAAACCGGGGCGCAGGTGCGGTATTTCGTACCATTCCATCTGAGGT
ATTGACGATGGAACAGCTTGGTATGGGACCGATTTTTGAGAAAATCTCTAACTACAAACGCGGCGTGGTACTGGTCACAG
GTCCAACGGGTTCGGGTAAGTCAACAACCCTTGCGGCGATGATTAACTATATCAATGAAACCCGTAAAAAACATATCTTA
ACCATCGAAGACCCGATTGAATTTGTGCATCAATCAAAAAAATCCCTCATCAACCAACGGGAAGTCCACCGTGATACCTT
AAGCTTTGATGCTGCGCTGCGCTCTGCCCTACGTGAAGACCCTGATGTTATTCTTGTCGGTGAGATGCGTGACCTTGAGA
CCATCCGCTTGGCATTGACCGCTGCTGAAACAGGGCACTTGGTATTTGGGACATTGCATACCTCATCTGCTGCCAAAACC
ATTGACCGTGTGGTCGACGTGTTCCCCGCCGCCGAAAAAGACATGATTCGTGCGATGTTATCTGAGTCGCTGCAAGCGGT
TATCTCGCAGTCGCTACTCAAACGCCAAACGGGAGGTCGTGTCGCCGCGCATGAAATTATGATTGGTACGCCTGCGATTC
GTAACTTGATTCGTGAAAACAAAGTCGCCCAAATGTACTCTGCTATCCAAACCAGTGCAGGCGATGGTATGACCACACTC
GATCAAAGCCTTCGCGAGTTGGTCAATAAAGGAGTGATTAGCAAAGAATCGGCGCGCCAATATGCCAAACAACCTGAAAA
TTTTATGTGA
ATGGCAAAGGAATTATCGATTGACGATTTGTTGCGTTTTGCATTCAAAAATAAAGCCTCTGACTTACACATTTCAGCAGG
CTTACCGCCGATGATTCGGGTAGATGGTGAAATCACCAAAATCAACATGCCGCCGCTTGATCACCAAAAAGTGCATAGTT
TGATTTATGACATCATGAACGACAAACAACGTGCCGATTATGAAGAGTTTTTTGAAACCGATTTTTCGTTTGAAATTCCC
AATGTGGCGCGCTTTCGTGTCAATGCCTTTAACCAAAACCGGGGCGCAGGTGCGGTATTTCGTACCATTCCATCTGAGGT
ATTGACGATGGAACAGCTTGGTATGGGACCGATTTTTGAGAAAATCTCTAACTACAAACGCGGCGTGGTACTGGTCACAG
GTCCAACGGGTTCGGGTAAGTCAACAACCCTTGCGGCGATGATTAACTATATCAATGAAACCCGTAAAAAACATATCTTA
ACCATCGAAGACCCGATTGAATTTGTGCATCAATCAAAAAAATCCCTCATCAACCAACGGGAAGTCCACCGTGATACCTT
AAGCTTTGATGCTGCGCTGCGCTCTGCCCTACGTGAAGACCCTGATGTTATTCTTGTCGGTGAGATGCGTGACCTTGAGA
CCATCCGCTTGGCATTGACCGCTGCTGAAACAGGGCACTTGGTATTTGGGACATTGCATACCTCATCTGCTGCCAAAACC
ATTGACCGTGTGGTCGACGTGTTCCCCGCCGCCGAAAAAGACATGATTCGTGCGATGTTATCTGAGTCGCTGCAAGCGGT
TATCTCGCAGTCGCTACTCAAACGCCAAACGGGAGGTCGTGTCGCCGCGCATGAAATTATGATTGGTACGCCTGCGATTC
GTAACTTGATTCGTGAAAACAAAGTCGCCCAAATGTACTCTGCTATCCAAACCAGTGCAGGCGATGGTATGACCACACTC
GATCAAAGCCTTCGCGAGTTGGTCAATAAAGGAGTGATTAGCAAAGAATCGGCGCGCCAATATGCCAAACAACCTGAAAA
TTTTATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
80 |
98.854 |
0.791 |
| pilT | Acinetobacter baumannii D1279779 |
80 |
98.854 |
0.791 |
| pilT | Acinetobacter baumannii strain A118 |
80 |
98.854 |
0.791 |
| pilT | Pseudomonas aeruginosa PAK |
77.616 |
98.567 |
0.765 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.326 |
98.567 |
0.762 |
| pilT | Acinetobacter baylyi ADP1 |
76.744 |
98.567 |
0.756 |
| pilT | Legionella pneumophila strain Lp02 |
73.964 |
96.848 |
0.716 |
| pilT | Legionella pneumophila strain ERS1305867 |
73.964 |
96.848 |
0.716 |
| pilT | Neisseria meningitidis 8013 |
67.536 |
98.854 |
0.668 |
| pilT | Neisseria gonorrhoeae MS11 |
67.246 |
98.854 |
0.665 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.657 |
95.989 |
0.659 |
| pilT | Vibrio cholerae strain A1552 |
68.657 |
95.989 |
0.659 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.436 |
100 |
0.524 |
| pilU | Acinetobacter baylyi ADP1 |
41.329 |
99.14 |
0.41 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.708 |
97.135 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
40 |
95.989 |
0.384 |