Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GMET_RS07020 | Genome accession | NC_007517 |
| Coordinates | 1561466..1562563 (+) | Length | 365 a.a. |
| NCBI ID | WP_004513114.1 | Uniprot ID | Q39VU6 |
| Organism | Geobacter metallireducens GS-15 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1556466..1567563
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GMET_RS07005 (Gmet_1391) | - | 1556833..1558692 (+) | 1860 | WP_004513117.1 | DUF2723 domain-containing protein | - |
| GMET_RS07010 (Gmet_1392) | aroE | 1558696..1559556 (+) | 861 | WP_004513116.1 | shikimate dehydrogenase | - |
| GMET_RS07015 (Gmet_1393) | pilB | 1559620..1561326 (+) | 1707 | WP_004513115.1 | type IV-A pilus assembly ATPase PilB | - |
| GMET_RS07020 (Gmet_1394) | pilT | 1561466..1562563 (+) | 1098 | WP_004513114.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GMET_RS07025 (Gmet_1395) | - | 1562595..1563812 (+) | 1218 | WP_004513113.1 | type II secretion system F family protein | - |
| GMET_RS07030 (Gmet_1396) | - | 1563822..1565465 (+) | 1644 | WP_004513112.1 | two-component system sensor histidine kinase NtrB | - |
| GMET_RS07035 (Gmet_1397) | - | 1565515..1566891 (+) | 1377 | WP_004513111.1 | sigma-54-dependent transcriptional regulator | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 40661.08 Da Isoelectric Point: 7.8478
>NTDB_id=24952 GMET_RS07020 WP_004513114.1 1561466..1562563(+) (pilT) [Geobacter metallireducens GS-15]
MANMHQLLTELVNRGGSDLHLTTNSPPQIRIDGKLLPLDMPPLNAVDTKQLCYSILTEQQKHKFEENNELDLSFGIKGLS
RFRGNVFVQRGAVAGVFRVIPYKILSFEELGLPPVVRELAEKPRGLVLVTGPTGSGKSTTLAAIIDKINTDRHEHIVTVE
DPIEYLHPHKSCVVNQREVGADTKSFKNALKYILRQDPDVVLVGELRDLETIEAALTLAETGHLCFATLHTNSAVQTINR
IVDVFPSYQQPQVRAQLSFVLEGVLSQTLLPKASGTGRVLAIEVMVPNPAIRNLIREDKIHQIYSQMQVGQEKFGMMTMN
QCLYGLLQKRHITMDVGMGRSPDPDELKQMLTSGVRPQAPRPPMR
MANMHQLLTELVNRGGSDLHLTTNSPPQIRIDGKLLPLDMPPLNAVDTKQLCYSILTEQQKHKFEENNELDLSFGIKGLS
RFRGNVFVQRGAVAGVFRVIPYKILSFEELGLPPVVRELAEKPRGLVLVTGPTGSGKSTTLAAIIDKINTDRHEHIVTVE
DPIEYLHPHKSCVVNQREVGADTKSFKNALKYILRQDPDVVLVGELRDLETIEAALTLAETGHLCFATLHTNSAVQTINR
IVDVFPSYQQPQVRAQLSFVLEGVLSQTLLPKASGTGRVLAIEVMVPNPAIRNLIREDKIHQIYSQMQVGQEKFGMMTMN
QCLYGLLQKRHITMDVGMGRSPDPDELKQMLTSGVRPQAPRPPMR
Nucleotide
Download Length: 1098 bp
>NTDB_id=24952 GMET_RS07020 WP_004513114.1 1561466..1562563(+) (pilT) [Geobacter metallireducens GS-15]
ATGGCCAACATGCATCAGCTGCTCACGGAGCTCGTCAATCGTGGAGGGTCGGACCTCCATCTCACCACCAACTCTCCTCC
CCAGATCCGGATCGACGGGAAACTGCTGCCCCTCGACATGCCACCCCTGAATGCGGTCGATACGAAGCAGCTCTGCTACA
GCATCCTTACCGAGCAGCAGAAGCACAAGTTCGAGGAGAACAACGAGTTGGACCTCTCCTTCGGCATCAAGGGACTGTCA
CGTTTCAGGGGTAACGTCTTTGTCCAGCGGGGGGCCGTGGCCGGGGTGTTCCGGGTTATTCCCTACAAGATCCTCTCCTT
CGAGGAACTGGGGCTCCCGCCGGTGGTGAGGGAGTTGGCCGAGAAGCCCCGGGGCCTTGTCCTCGTCACCGGTCCCACCG
GCAGCGGCAAGTCCACGACCCTGGCCGCCATTATCGACAAGATCAACACCGACCGCCACGAGCACATCGTCACCGTCGAG
GATCCCATCGAGTACCTCCACCCCCACAAGAGCTGCGTGGTGAATCAGCGGGAGGTGGGAGCCGACACCAAGAGCTTCAA
AAACGCCCTCAAGTACATCCTCCGCCAGGACCCGGACGTGGTTCTCGTGGGGGAACTCCGGGACCTGGAGACCATCGAGG
CGGCCCTGACCCTGGCCGAAACCGGTCACCTCTGCTTTGCCACGCTCCATACGAACTCCGCGGTCCAGACCATCAACCGG
ATCGTGGATGTGTTCCCCTCCTACCAGCAGCCCCAGGTTCGCGCCCAGCTTTCCTTTGTCCTCGAAGGTGTTCTCTCCCA
AACCCTTCTTCCCAAAGCCAGCGGCACGGGGAGGGTGCTCGCCATCGAGGTCATGGTGCCGAACCCGGCCATCCGCAACC
TGATCCGCGAGGACAAGATCCATCAGATCTACTCCCAGATGCAGGTGGGGCAGGAGAAGTTCGGCATGATGACCATGAAC
CAGTGTCTGTACGGCCTGTTGCAGAAGCGGCACATCACCATGGACGTCGGCATGGGGCGCTCGCCTGATCCCGACGAGCT
CAAGCAGATGCTTACCAGCGGTGTGCGGCCCCAGGCGCCGCGCCCCCCCATGAGATAA
ATGGCCAACATGCATCAGCTGCTCACGGAGCTCGTCAATCGTGGAGGGTCGGACCTCCATCTCACCACCAACTCTCCTCC
CCAGATCCGGATCGACGGGAAACTGCTGCCCCTCGACATGCCACCCCTGAATGCGGTCGATACGAAGCAGCTCTGCTACA
GCATCCTTACCGAGCAGCAGAAGCACAAGTTCGAGGAGAACAACGAGTTGGACCTCTCCTTCGGCATCAAGGGACTGTCA
CGTTTCAGGGGTAACGTCTTTGTCCAGCGGGGGGCCGTGGCCGGGGTGTTCCGGGTTATTCCCTACAAGATCCTCTCCTT
CGAGGAACTGGGGCTCCCGCCGGTGGTGAGGGAGTTGGCCGAGAAGCCCCGGGGCCTTGTCCTCGTCACCGGTCCCACCG
GCAGCGGCAAGTCCACGACCCTGGCCGCCATTATCGACAAGATCAACACCGACCGCCACGAGCACATCGTCACCGTCGAG
GATCCCATCGAGTACCTCCACCCCCACAAGAGCTGCGTGGTGAATCAGCGGGAGGTGGGAGCCGACACCAAGAGCTTCAA
AAACGCCCTCAAGTACATCCTCCGCCAGGACCCGGACGTGGTTCTCGTGGGGGAACTCCGGGACCTGGAGACCATCGAGG
CGGCCCTGACCCTGGCCGAAACCGGTCACCTCTGCTTTGCCACGCTCCATACGAACTCCGCGGTCCAGACCATCAACCGG
ATCGTGGATGTGTTCCCCTCCTACCAGCAGCCCCAGGTTCGCGCCCAGCTTTCCTTTGTCCTCGAAGGTGTTCTCTCCCA
AACCCTTCTTCCCAAAGCCAGCGGCACGGGGAGGGTGCTCGCCATCGAGGTCATGGTGCCGAACCCGGCCATCCGCAACC
TGATCCGCGAGGACAAGATCCATCAGATCTACTCCCAGATGCAGGTGGGGCAGGAGAAGTTCGGCATGATGACCATGAAC
CAGTGTCTGTACGGCCTGTTGCAGAAGCGGCACATCACCATGGACGTCGGCATGGGGCGCTCGCCTGATCCCGACGAGCT
CAAGCAGATGCTTACCAGCGGTGTGCGGCCCCAGGCGCCGCGCCCCCCCATGAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
54.519 |
93.973 |
0.512 |
| pilT | Legionella pneumophila strain Lp02 |
54.519 |
93.973 |
0.512 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.874 |
95.342 |
0.504 |
| pilT | Pseudomonas stutzeri DSM 10701 |
51.014 |
94.521 |
0.482 |
| pilT | Acinetobacter baylyi ADP1 |
50.725 |
94.521 |
0.479 |
| pilT | Pseudomonas aeruginosa PAK |
50.725 |
94.521 |
0.479 |
| pilT | Acinetobacter baumannii D1279779 |
52.294 |
89.589 |
0.468 |
| pilT | Acinetobacter baumannii strain A118 |
52.294 |
89.589 |
0.468 |
| pilT | Acinetobacter nosocomialis M2 |
52.294 |
89.589 |
0.468 |
| pilT | Neisseria meningitidis 8013 |
48.503 |
91.507 |
0.444 |
| pilT | Vibrio cholerae strain A1552 |
49.541 |
89.589 |
0.444 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.541 |
89.589 |
0.444 |
| pilT | Neisseria gonorrhoeae MS11 |
47.748 |
91.233 |
0.436 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.595 |
96.164 |
0.4 |
| pilU | Vibrio cholerae strain A1552 |
41.429 |
95.89 |
0.397 |
| pilU | Acinetobacter baylyi ADP1 |
39.481 |
95.068 |
0.375 |