Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilT   Type   Machinery gene
Locus tag   BG910_RS05830 Genome accession   NZ_CP022278
Coordinates   1177532..1178575 (+) Length   347 a.a.
NCBI ID   WP_089036027.1    Uniprot ID   A0A220S1J7
Organism   Neisseria chenwenguii strain 10023     
Function   power the assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1172532..1183575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG910_RS05800 (BG910_05790) - 1172630..1172887 (-) 258 WP_089036022.1 bacteriocin -
  BG910_RS05805 (BG910_05795) - 1173220..1173549 (-) 330 WP_089037162.1 FKBP-type peptidyl-prolyl cis-trans isomerase -
  BG910_RS05810 (BG910_05800) - 1173679..1174626 (+) 948 WP_089036023.1 D-2-hydroxyacid dehydrogenase -
  BG910_RS05815 (BG910_05805) dksA 1174910..1175326 (-) 417 WP_089036024.1 RNA polymerase-binding protein DksA -
  BG910_RS05820 (BG910_05810) proC 1175659..1176456 (-) 798 WP_089036025.1 pyrroline-5-carboxylate reductase -
  BG910_RS05825 (BG910_05815) - 1176707..1177393 (-) 687 WP_089036026.1 YggS family pyridoxal phosphate-dependent enzyme -
  BG910_RS05830 (BG910_05820) pilT 1177532..1178575 (+) 1044 WP_089036027.1 type IV pilus twitching motility protein PilT Machinery gene
  BG910_RS05835 (BG910_05825) - 1178632..1179861 (+) 1230 WP_089036028.1 PilT/PilU family type 4a pilus ATPase -
  BG910_RS05840 (BG910_05830) - 1179931..1181235 (-) 1305 WP_089036029.1 pitrilysin family protein -
  BG910_RS05845 (BG910_05835) - 1181828..1183156 (-) 1329 WP_089036030.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 347 a.a.        Molecular weight: 38114.72 Da        Isoelectric Point: 7.1308

>NTDB_id=237850 BG910_RS05830 WP_089036027.1 1177532..1178575(+) (pilT) [Neisseria chenwenguii strain 10023]
MQITDLLAFGVKNKASDLHLSAMMSPMIRVHGDIRRINLPEMLAEEVGNMITSVMNDHQRKLYQQDLEVDFSFELPNVAR
FRVNAFNTERGPAAVFRTIPSVVLSLDELKAPRIFQKIADNPRGLVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLVNQRELHQHTHSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLRAVISQTLLKTANGNSRVAAHEILISTPAVRNLIRENKIAQINSALQTGQAHGMQTLDQA
LQQLLRQGSISAEVARSKAQNVESMIG

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=237850 BG910_RS05830 WP_089036027.1 1177532..1178575(+) (pilT) [Neisseria chenwenguii strain 10023]
ATGCAGATTACCGACTTACTCGCCTTCGGCGTGAAAAACAAAGCATCCGACCTTCATCTGAGCGCAATGATGTCGCCGAT
GATCCGTGTTCACGGCGACATCCGCCGCATCAACCTGCCGGAAATGTTGGCCGAAGAAGTGGGCAACATGATTACTTCCG
TGATGAACGACCATCAGCGCAAACTCTACCAGCAGGATTTGGAGGTGGACTTTTCCTTCGAGCTGCCCAACGTGGCGCGT
TTCCGTGTGAACGCATTCAACACCGAGCGCGGCCCGGCAGCGGTGTTCCGTACCATTCCGAGCGTGGTGCTTTCGTTGGA
CGAACTCAAAGCCCCGCGCATTTTCCAAAAAATCGCCGACAATCCGCGCGGCCTCGTGCTCGTTACCGGTCCGACCGGTT
CGGGTAAATCGACCACGCTGGCGGCAATGATCAACTACATCAACGAAACCCAGCCCGCGCACATCCTGACCATCGAAGAC
CCGATTGAGTTTGTGCACCAAAGTAAAAAATCGCTGGTCAACCAACGCGAGCTGCACCAACACACCCACAGTTTCGCCAA
TGCGCTGCGCTCTGCGCTGCGTGAAGACCCGGACGTGATTCTGGTGGGCGAGATGCGCGACCCGGAAACCATCGGCCTTG
CGCTGACCGCCGCCGAAACCGGCCACCTGGTGTTCGGTACGCTGCACACCACCGGCGCGGCGAAAACGGTTGACCGTATT
GTGGACGTGTTCCCCGCCGGCGAAAAAGAAATGGTGCGATCCATGCTGTCGGAATCGCTGCGCGCGGTGATTTCGCAAAC
CCTGCTGAAAACCGCCAACGGTAACAGCCGCGTCGCCGCCCACGAAATTTTGATTTCCACCCCCGCCGTGCGCAACCTGA
TCCGCGAAAACAAAATCGCTCAGATCAACTCCGCGCTGCAAACCGGCCAGGCACACGGCATGCAGACGCTCGACCAGGCG
CTCCAGCAGCTTTTGCGCCAAGGCAGCATCAGCGCCGAAGTGGCGCGCAGCAAAGCGCAAAACGTGGAAAGCATGATCGG
TTAA

Domains

Predicted by InterproScan.

Type II/IV secretion system protein (T2SSE)

(11-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A220S1J7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilT Neisseria meningitidis 8013

88.406

99.424

0.879
  pilT Neisseria gonorrhoeae MS11

88.116

99.424

0.876
  pilT Acinetobacter nosocomialis M2

69.364

99.712

0.692
  pilT Acinetobacter baumannii D1279779

69.364

99.712

0.692
  pilT Acinetobacter baumannii strain A118

69.364

99.712

0.692
  pilT Acinetobacter baylyi ADP1

68.986

99.424

0.686
  pilT Pseudomonas stutzeri DSM 10701

68.696

99.424

0.683
  pilT Pseudomonas aeruginosa PAK

69.118

97.983

0.677
  pilT Legionella pneumophila strain Lp02

66.569

98.271

0.654
  pilT Legionella pneumophila strain ERS1305867

66.569

98.271

0.654
  pilT Vibrio cholerae O1 biovar El Tor strain E7946

65

97.983

0.637
  pilT Vibrio cholerae strain A1552

65

97.983

0.637
  pilT Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

50.442

97.695

0.493
  pilU Pseudomonas stutzeri DSM 10701

40.896

96.542

0.395
  pilU Vibrio cholerae strain A1552

39.13

99.424

0.389
  pilU Acinetobacter baylyi ADP1

40.361

95.677

0.386

Multiple sequence alignment