Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | BMF08_RS08990 | Genome accession | NZ_CP019113 |
| Coordinates | 1881460..1882437 (+) | Length | 325 a.a. |
| NCBI ID | WP_072570526.1 | Uniprot ID | - |
| Organism | Enterobacter sp. SA187 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1876460..1887437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMF08_RS08960 | djlA | 1877283..1878095 (+) | 813 | WP_072570516.1 | co-chaperone DjlA | - |
| BMF08_RS08965 | hemW | 1878137..1879273 (-) | 1137 | WP_072570517.1 | radical SAM family heme chaperone HemW | - |
| BMF08_RS08970 | - | 1879266..1879859 (-) | 594 | WP_072570519.1 | XTP/dITP diphosphatase | - |
| BMF08_RS08975 | yggU | 1879868..1880158 (-) | 291 | WP_072570521.1 | DUF167 family protein YggU | - |
| BMF08_RS08980 | - | 1880155..1880721 (-) | 567 | WP_072570523.1 | YggT family protein | - |
| BMF08_RS08985 | - | 1880730..1881443 (-) | 714 | WP_072570524.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| BMF08_RS08990 | pilT | 1881460..1882437 (+) | 978 | WP_072570526.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| BMF08_RS08995 | - | 1882441..1884699 (-) | 2259 | WP_072570528.1 | FAD-dependent oxidoreductase | - |
| BMF08_RS09000 | - | 1884769..1885461 (+) | 693 | WP_072570820.1 | transcriptional regulator | - |
| BMF08_RS09005 | ruvX | 1885592..1886008 (-) | 417 | WP_072570530.1 | Holliday junction resolvase RuvX | - |
| BMF08_RS09010 | - | 1886008..1886571 (-) | 564 | WP_072570532.1 | YqgE/AlgH family protein | - |
Sequence
Protein
Download Length: 325 a.a. Molecular weight: 35607.69 Da Isoelectric Point: 7.1686
>NTDB_id=213132 BMF08_RS08990 WP_072570526.1 1881460..1882437(+) (pilT) [Enterobacter sp. SA187]
MDMEEIVALSVKHNVSDLHLCSDGPPRWRRQGRLEAAPFPPPDPDALLQATLDERQRDEWRTRRQVDFAVSLNQHRLRAS
AFRHHRGISLALRLLPDRCPTLAALETPPLLSTLLARENGLILVTGATGSGKSTTLAAMVNALNHSLHGHILTLEDPVEF
VHQSAQCLIQQREIGPHCASFADGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAIERLVDTF
PAQEKDPVRSQLAGSLQAVLAQKLEADRQGGRVALFELLVNTPAVANLIREGKTHQLPGMMQTGQQAGMLTFAQSHQQRV
AQGRL
MDMEEIVALSVKHNVSDLHLCSDGPPRWRRQGRLEAAPFPPPDPDALLQATLDERQRDEWRTRRQVDFAVSLNQHRLRAS
AFRHHRGISLALRLLPDRCPTLAALETPPLLSTLLARENGLILVTGATGSGKSTTLAAMVNALNHSLHGHILTLEDPVEF
VHQSAQCLIQQREIGPHCASFADGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAIERLVDTF
PAQEKDPVRSQLAGSLQAVLAQKLEADRQGGRVALFELLVNTPAVANLIREGKTHQLPGMMQTGQQAGMLTFAQSHQQRV
AQGRL
Nucleotide
Download Length: 978 bp
>NTDB_id=213132 BMF08_RS08990 WP_072570526.1 1881460..1882437(+) (pilT) [Enterobacter sp. SA187]
ATGGATATGGAAGAGATCGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGTGACGGGCCGCCGCG
CTGGCGACGACAGGGCAGGCTGGAGGCCGCGCCTTTTCCGCCGCCGGATCCCGATGCCCTGTTGCAGGCCACGCTCGACG
AGCGGCAGCGTGACGAGTGGCGCACCCGGCGGCAGGTGGATTTTGCCGTTTCGCTCAATCAGCATCGCCTGCGCGCCAGC
GCCTTTCGCCACCATCGCGGCATCTCGCTGGCGTTGCGCCTGCTGCCGGATCGCTGCCCGACGCTGGCGGCGCTGGAAAC
GCCGCCGCTGCTGAGCACGCTACTGGCGCGGGAAAACGGTCTGATCCTGGTGACCGGGGCGACCGGCAGCGGCAAATCCA
CCACGCTTGCGGCGATGGTCAATGCGCTTAATCATTCGCTGCACGGCCATATTCTGACGCTGGAGGATCCGGTGGAGTTC
GTGCACCAGAGTGCGCAATGTCTGATCCAGCAGCGGGAAATCGGCCCGCACTGCGCCTCGTTTGCCGACGGCTTAAGGGC
AGCACTGCGGGAAGATCCCGATGTGATTTTGCTTGGCGAGCTGCGCGATAGCGAAACCATCCGGCTGGCGCTGACGGCGG
CGGAGACCGGGCATCTGGTGCTGGCAACCCTGCATACCCGTGGCGCGGCGCAGGCGATAGAGCGGCTGGTGGACACCTTT
CCGGCGCAGGAAAAAGATCCTGTACGCAGCCAGCTGGCGGGCAGTTTACAGGCGGTACTGGCGCAAAAGCTGGAGGCTGA
CAGGCAGGGGGGCAGGGTGGCGCTGTTTGAACTGCTGGTGAACACCCCGGCGGTGGCGAATCTTATTCGCGAGGGGAAAA
CCCACCAGTTGCCCGGCATGATGCAGACCGGGCAGCAGGCAGGCATGCTGACCTTCGCCCAAAGCCACCAGCAGCGGGTG
GCGCAGGGCAGGCTTTAA
ATGGATATGGAAGAGATCGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGTGACGGGCCGCCGCG
CTGGCGACGACAGGGCAGGCTGGAGGCCGCGCCTTTTCCGCCGCCGGATCCCGATGCCCTGTTGCAGGCCACGCTCGACG
AGCGGCAGCGTGACGAGTGGCGCACCCGGCGGCAGGTGGATTTTGCCGTTTCGCTCAATCAGCATCGCCTGCGCGCCAGC
GCCTTTCGCCACCATCGCGGCATCTCGCTGGCGTTGCGCCTGCTGCCGGATCGCTGCCCGACGCTGGCGGCGCTGGAAAC
GCCGCCGCTGCTGAGCACGCTACTGGCGCGGGAAAACGGTCTGATCCTGGTGACCGGGGCGACCGGCAGCGGCAAATCCA
CCACGCTTGCGGCGATGGTCAATGCGCTTAATCATTCGCTGCACGGCCATATTCTGACGCTGGAGGATCCGGTGGAGTTC
GTGCACCAGAGTGCGCAATGTCTGATCCAGCAGCGGGAAATCGGCCCGCACTGCGCCTCGTTTGCCGACGGCTTAAGGGC
AGCACTGCGGGAAGATCCCGATGTGATTTTGCTTGGCGAGCTGCGCGATAGCGAAACCATCCGGCTGGCGCTGACGGCGG
CGGAGACCGGGCATCTGGTGCTGGCAACCCTGCATACCCGTGGCGCGGCGCAGGCGATAGAGCGGCTGGTGGACACCTTT
CCGGCGCAGGAAAAAGATCCTGTACGCAGCCAGCTGGCGGGCAGTTTACAGGCGGTACTGGCGCAAAAGCTGGAGGCTGA
CAGGCAGGGGGGCAGGGTGGCGCTGTTTGAACTGCTGGTGAACACCCCGGCGGTGGCGAATCTTATTCGCGAGGGGAAAA
CCCACCAGTTGCCCGGCATGATGCAGACCGGGCAGCAGGCAGGCATGCTGACCTTCGCCCAAAGCCACCAGCAGCGGGTG
GCGCAGGGCAGGCTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.376 |
100 |
0.517 |
| pilT | Vibrio cholerae strain A1552 |
51.376 |
100 |
0.517 |
| pilT | Neisseria meningitidis 8013 |
48.171 |
100 |
0.486 |
| pilT | Neisseria gonorrhoeae MS11 |
47.866 |
100 |
0.483 |
| pilT | Legionella pneumophila strain ERS1305867 |
48.742 |
97.846 |
0.477 |
| pilT | Legionella pneumophila strain Lp02 |
48.742 |
97.846 |
0.477 |
| pilT | Acinetobacter baumannii D1279779 |
47.095 |
100 |
0.474 |
| pilT | Acinetobacter baumannii strain A118 |
47.095 |
100 |
0.474 |
| pilT | Pseudomonas stutzeri DSM 10701 |
46.789 |
100 |
0.471 |
| pilT | Acinetobacter nosocomialis M2 |
46.789 |
100 |
0.471 |
| pilT | Acinetobacter baylyi ADP1 |
46.789 |
100 |
0.471 |
| pilT | Pseudomonas aeruginosa PAK |
46.483 |
100 |
0.468 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
44.34 |
97.846 |
0.434 |
| pilU | Vibrio cholerae strain A1552 |
39.939 |
100 |
0.403 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.091 |
100 |
0.397 |
| pilU | Acinetobacter baylyi ADP1 |
36.957 |
99.077 |
0.366 |