Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NGO_RS09595 | Genome accession | NC_002946 |
| Coordinates | 1881198..1882241 (+) | Length | 347 a.a. |
| NCBI ID | WP_010951368.1 | Uniprot ID | Q5F5L5 |
| Organism | Neisseria gonorrhoeae FA 1090 | ||
| Function | pseudopilus biogenesis (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1876198..1887241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGO_RS12130 | - | 1878429..1878563 (-) | 135 | WP_258076284.1 | hypothetical protein | - |
| NGO_RS09575 (NGO1904) | dksA | 1878578..1878994 (-) | 417 | WP_003692108.1 | RNA polymerase-binding protein DksA | - |
| NGO_RS09580 (NGO1905) | proC | 1879145..1879936 (-) | 792 | WP_003694504.1 | pyrroline-5-carboxylate reductase | - |
| NGO_RS09585 (NGO1906) | - | 1879985..1880392 (-) | 408 | WP_003690202.1 | hypothetical protein | - |
| NGO_RS09590 (NGO1907) | - | 1880392..1881078 (-) | 687 | WP_003690201.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| NGO_RS09595 (NGO1908) | pilT | 1881198..1882241 (+) | 1044 | WP_010951368.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| NGO_RS09600 (NGO1909) | - | 1882405..1883631 (+) | 1227 | WP_003692100.1 | PilT/PilU family type 4a pilus ATPase | - |
| NGO_RS09605 (NGO1910) | yccS | 1883748..1885898 (+) | 2151 | WP_010951369.1 | YccS family putative transporter | - |
| NGO_RS09610 (NGO1911) | - | 1886380..1886664 (-) | 285 | WP_003692093.1 | GIY-YIG nuclease family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37999.38 Da Isoelectric Point: 6.8964
>NTDB_id=21171 NGO_RS09595 WP_010951368.1 1881198..1882241(+) (pilT) [Neisseria gonorrhoeae FA 1090]
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGDGRVASHEILIANPAVRNLIRENKITQINSVLQTGRASGMQTMDQS
LQSLVRQGLIAPEATRRRAQNSESMSF
MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVAR
FRVNAFNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI
VDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGDGRVASHEILIANPAVRNLIRENKITQINSVLQTGRASGMQTMDQS
LQSLVRQGLIAPEATRRRAQNSESMSF
Nucleotide
Download Length: 1044 bp
>NTDB_id=21171 NGO_RS09595 WP_010951368.1 1881198..1882241(+) (pilT) [Neisseria gonorrhoeae FA 1090]
ATGCAGATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGACATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGCAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGCCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAACGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGAGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCCGAAACCATCGGCTTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCGGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCCGCCGGAGAGAAAGAAATGGTGCGTTCCATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCGACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCGGGCGAGCGGTATGCAGACGATGGACCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGCCACACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
ATGCAGATTACCGACTTACTCGCCTTCGGCGCTAAAAACAAAGCATCCGACCTTCACCTGAGTTCGGGCATATCCCCTAT
GATTCGGGTTCACGGCGACATGCGGCGCATCAACCTTCCCGAAATGAGCGCGGAAGAGGTCGGCAATATGGTAACTTCGG
TGATGAACGACCACCAGCGGAAAATCTACCAGCAAAACTTGGAAGTCGACTTCTCGTTCGAACTGCCCAACGTCGCCCGA
TTCCGCGTCAACGCCTTCAACACCGGCCGCGGCCCCGCCGCCGTATTCCGCACCATTCCCAGCACCGTCTTATCGCTGGA
AGAATTGAAAGCCCCGAGCATTTTCCAAAAAATCGCAGAATCGCCGCGCGGCATGGTATTGGTTACCGGCCCTACCGGTT
CGGGCAAATCGACCACGCTTGCCGCGATGATCAACTACATCAACGAAACCCAGCCGGCACACATCCTGACCATCGAAGAC
CCGATCGAATTCGTCCACCAAAGCAAAAAATCCCTGATTAACCAACGCGAGCTGCACCAGCACACCCTCAGCTTCGCCAA
CGCGCTGAGTTCCGCATTGCGCGAAGACCCCGACGTTATCCTTGTCGGCGAGATGCGCGACCCCGAAACCATCGGCTTGG
CACTGACCGCCGCCGAAACCGGACACTTGGTTTTCGGCACGCTGCACACGACCGGCGCGGCAAAAACCGTCGACCGTATC
GTGGACGTATTCCCCGCCGGAGAGAAAGAAATGGTGCGTTCCATGCTGTCCGAATCGCTGACCGCCGTCATCTCCCAAAA
CCTGCTGAAAACGCACGACGGCGACGGCCGTGTCGCCTCGCACGAAATCCTGATTGCCAACCCCGCCGTCCGCAACCTCA
TCCGCGAAAACAAAATCACGCAGATTAACTCCGTCCTGCAAACCGGGCGGGCGAGCGGTATGCAGACGATGGACCAATCG
CTGCAATCGCTGGTGCGCCAAGGGCTGATCGCACCGGAAGCCACACGCAGACGCGCGCAAAACAGCGAAAGTATGAGTTT
CTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria gonorrhoeae MS11 |
99.135 |
100 |
0.991 |
| pilT | Neisseria meningitidis 8013 |
98.271 |
100 |
0.983 |
| pilT | Acinetobacter baumannii D1279779 |
67.536 |
99.424 |
0.671 |
| pilT | Acinetobacter baumannii strain A118 |
67.536 |
99.424 |
0.671 |
| pilT | Acinetobacter nosocomialis M2 |
67.536 |
99.424 |
0.671 |
| pilT | Acinetobacter baylyi ADP1 |
66.957 |
99.424 |
0.666 |
| pilT | Pseudomonas stutzeri DSM 10701 |
66.667 |
99.424 |
0.663 |
| pilT | Pseudomonas aeruginosa PAK |
66.087 |
99.424 |
0.657 |
| pilT | Legionella pneumophila strain Lp02 |
63.93 |
98.271 |
0.628 |
| pilT | Legionella pneumophila strain ERS1305867 |
63.93 |
98.271 |
0.628 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
64.242 |
95.101 |
0.611 |
| pilT | Vibrio cholerae strain A1552 |
64.242 |
95.101 |
0.611 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.392 |
97.695 |
0.522 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40 |
99.424 |
0.398 |
| pilU | Acinetobacter baylyi ADP1 |
40 |
93.66 |
0.375 |
| pilU | Vibrio cholerae strain A1552 |
39.692 |
93.66 |
0.372 |