Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GS_RS07425 | Genome accession | NC_002939 |
| Coordinates | 1636674..1637771 (+) | Length | 365 a.a. |
| NCBI ID | WP_010942138.1 | Uniprot ID | Q74D27 |
| Organism | Geobacter sulfurreducens PCA | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1631674..1642771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GS_RS07410 (GSU1489) | - | 1632040..1633911 (+) | 1872 | WP_010942135.1 | DUF2723 domain-containing protein | - |
| GS_RS07415 (GSU1490) | aroE | 1633914..1634774 (+) | 861 | WP_010942136.1 | shikimate dehydrogenase | - |
| GS_RS07420 (GSU1491) | pilB | 1634840..1636546 (+) | 1707 | WP_010942137.1 | type IV-A pilus assembly ATPase PilB | - |
| GS_RS07425 (GSU1492) | pilT | 1636674..1637771 (+) | 1098 | WP_010942138.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GS_RS07430 (GSU1493) | - | 1637808..1639025 (+) | 1218 | WP_010942139.1 | type II secretion system F family protein | - |
| GS_RS07435 (GSU1494) | - | 1639029..1640681 (+) | 1653 | WP_010942140.1 | two-component system sensor histidine kinase NtrB | - |
| GS_RS07440 (GSU1495) | - | 1640715..1642091 (+) | 1377 | WP_010942141.1 | sigma-54-dependent transcriptional regulator | - |
| GS_RS07445 (GSU1496) | - | 1642311..1642526 (+) | 216 | WP_049786599.1 | type IV pilin protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 40713.12 Da Isoelectric Point: 7.9038
>NTDB_id=21055 GS_RS07425 WP_010942138.1 1636674..1637771(+) (pilT) [Geobacter sulfurreducens PCA]
MANMHQLLTELVNRGGSDLHITTNSPPQIRVDGQLIPLEMPPLNAVDTKQLCYSILTEQQKHKFEEANELDLSFGIKGLS
RFRGNVFIQRGAVAGVFRVIPYKILTFEELGLPVVVKELAEKPRGLILVTGPTGSGKSTTLAAIIDKINTERHDHIVTIE
DPIEYLHPHKSCVVNQREVGADTKSFKNALKYILRQDPDVVLVGELRDLETIEAALTLAETGHLCLATLHTNSAVQTINR
IVDVFPPYQQPQVRAQLSFVLEGVMSQTLLPNVSGKGRVLALEVMVPNPAIRNLIREDKIHQIYSQMQVGQEKFGMQTMN
QSLFSLLQKRRISLDVAMARSSDPDELKQMLASAQRPPGQRPQMR
MANMHQLLTELVNRGGSDLHITTNSPPQIRVDGQLIPLEMPPLNAVDTKQLCYSILTEQQKHKFEEANELDLSFGIKGLS
RFRGNVFIQRGAVAGVFRVIPYKILTFEELGLPVVVKELAEKPRGLILVTGPTGSGKSTTLAAIIDKINTERHDHIVTIE
DPIEYLHPHKSCVVNQREVGADTKSFKNALKYILRQDPDVVLVGELRDLETIEAALTLAETGHLCLATLHTNSAVQTINR
IVDVFPPYQQPQVRAQLSFVLEGVMSQTLLPNVSGKGRVLALEVMVPNPAIRNLIREDKIHQIYSQMQVGQEKFGMQTMN
QSLFSLLQKRRISLDVAMARSSDPDELKQMLASAQRPPGQRPQMR
Nucleotide
Download Length: 1098 bp
>NTDB_id=21055 GS_RS07425 WP_010942138.1 1636674..1637771(+) (pilT) [Geobacter sulfurreducens PCA]
ATGGCCAACATGCATCAACTCCTCACGGAACTCGTCAATCGCGGGGGCTCGGACCTTCACATCACCACTAACTCGCCCCC
GCAGATCCGGGTCGACGGCCAGTTGATCCCTCTCGAGATGCCACCGCTCAATGCGGTGGACACCAAGCAGCTCTGCTACA
GCATCCTTACTGAGCAGCAGAAGCACAAATTCGAGGAAGCCAACGAACTCGACCTTTCCTTCGGCATCAAGGGGCTTTCC
CGTTTCCGGGGGAACGTGTTCATTCAGCGGGGCGCAGTTGCCGGCGTGTTCCGGGTGATTCCCTACAAGATTCTCACCTT
TGAAGAGCTGGGTCTGCCGGTGGTGGTGAAAGAGCTGGCGGAGAAGCCTCGGGGGCTGATCCTCGTTACCGGACCCACCG
GCAGCGGCAAGTCGACCACCCTGGCCGCCATCATCGACAAGATCAACACCGAACGGCACGATCATATTGTGACCATCGAG
GATCCCATCGAGTACCTGCATCCTCACAAGAGTTGCGTGGTGAACCAGCGTGAGGTGGGGGCCGATACGAAAAGCTTCAA
GAACGCCTTGAAATATATCCTGCGCCAGGATCCGGACGTGGTCCTCGTGGGGGAGCTCCGGGATCTGGAGACCATCGAGG
CGGCCCTGACCCTTGCCGAGACCGGTCACCTCTGTCTCGCCACGCTCCACACAAACTCGGCGGTGCAGACCATCAACCGG
ATCGTGGACGTATTTCCCCCCTACCAGCAGCCCCAGGTCCGTGCCCAGCTTTCTTTCGTTCTGGAAGGGGTCATGTCCCA
GACCCTGCTGCCGAACGTATCGGGCAAGGGGAGGGTGCTGGCCCTGGAGGTGATGGTGCCCAATCCGGCCATCCGTAACC
TGATCCGCGAAGACAAGATCCACCAGATCTATTCCCAGATGCAGGTGGGGCAGGAGAAGTTCGGCATGCAGACCATGAAC
CAGTCGCTGTTCAGTCTGTTGCAGAAGAGACGGATTTCGCTTGATGTGGCCATGGCCCGCTCGTCCGATCCCGACGAACT
CAAGCAGATGCTGGCCAGCGCCCAGCGGCCACCGGGTCAGCGCCCTCAGATGAGGTAA
ATGGCCAACATGCATCAACTCCTCACGGAACTCGTCAATCGCGGGGGCTCGGACCTTCACATCACCACTAACTCGCCCCC
GCAGATCCGGGTCGACGGCCAGTTGATCCCTCTCGAGATGCCACCGCTCAATGCGGTGGACACCAAGCAGCTCTGCTACA
GCATCCTTACTGAGCAGCAGAAGCACAAATTCGAGGAAGCCAACGAACTCGACCTTTCCTTCGGCATCAAGGGGCTTTCC
CGTTTCCGGGGGAACGTGTTCATTCAGCGGGGCGCAGTTGCCGGCGTGTTCCGGGTGATTCCCTACAAGATTCTCACCTT
TGAAGAGCTGGGTCTGCCGGTGGTGGTGAAAGAGCTGGCGGAGAAGCCTCGGGGGCTGATCCTCGTTACCGGACCCACCG
GCAGCGGCAAGTCGACCACCCTGGCCGCCATCATCGACAAGATCAACACCGAACGGCACGATCATATTGTGACCATCGAG
GATCCCATCGAGTACCTGCATCCTCACAAGAGTTGCGTGGTGAACCAGCGTGAGGTGGGGGCCGATACGAAAAGCTTCAA
GAACGCCTTGAAATATATCCTGCGCCAGGATCCGGACGTGGTCCTCGTGGGGGAGCTCCGGGATCTGGAGACCATCGAGG
CGGCCCTGACCCTTGCCGAGACCGGTCACCTCTGTCTCGCCACGCTCCACACAAACTCGGCGGTGCAGACCATCAACCGG
ATCGTGGACGTATTTCCCCCCTACCAGCAGCCCCAGGTCCGTGCCCAGCTTTCTTTCGTTCTGGAAGGGGTCATGTCCCA
GACCCTGCTGCCGAACGTATCGGGCAAGGGGAGGGTGCTGGCCCTGGAGGTGATGGTGCCCAATCCGGCCATCCGTAACC
TGATCCGCGAAGACAAGATCCACCAGATCTATTCCCAGATGCAGGTGGGGCAGGAGAAGTTCGGCATGCAGACCATGAAC
CAGTCGCTGTTCAGTCTGTTGCAGAAGAGACGGATTTCGCTTGATGTGGCCATGGCCCGCTCGTCCGATCCCGACGAACT
CAAGCAGATGCTGGCCAGCGCCCAGCGGCCACCGGGTCAGCGCCCTCAGATGAGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
55.891 |
90.685 |
0.507 |
| pilT | Legionella pneumophila strain Lp02 |
55.891 |
90.685 |
0.507 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.705 |
96.438 |
0.499 |
| pilT | Acinetobacter baylyi ADP1 |
51.014 |
94.521 |
0.482 |
| pilT | Pseudomonas stutzeri DSM 10701 |
51.014 |
94.521 |
0.482 |
| pilT | Pseudomonas aeruginosa PAK |
51.014 |
94.521 |
0.482 |
| pilT | Acinetobacter baumannii D1279779 |
50.435 |
94.521 |
0.477 |
| pilT | Acinetobacter baumannii strain A118 |
50.435 |
94.521 |
0.477 |
| pilT | Acinetobacter nosocomialis M2 |
50.435 |
94.521 |
0.477 |
| pilT | Neisseria meningitidis 8013 |
49.102 |
91.507 |
0.449 |
| pilT | Vibrio cholerae strain A1552 |
49.541 |
89.589 |
0.444 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.541 |
89.589 |
0.444 |
| pilT | Neisseria gonorrhoeae MS11 |
48.048 |
91.233 |
0.438 |
| pilU | Vibrio cholerae strain A1552 |
42.571 |
95.89 |
0.408 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.69 |
97.26 |
0.405 |
| pilU | Acinetobacter baylyi ADP1 |
39.344 |
100 |
0.395 |