Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GS_RS02175 | Genome accession | NC_002939 |
| Coordinates | 467782..468852 (+) | Length | 356 a.a. |
| NCBI ID | WP_010941105.1 | Uniprot ID | Q74G16 |
| Organism | Geobacter sulfurreducens PCA | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 462782..473852
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GS_RS02165 (GSU0434) | - | 464941..465945 (-) | 1005 | WP_010941103.1 | hypothetical protein | - |
| GS_RS02170 (GSU0435) | - | 466119..467768 (+) | 1650 | WP_010941104.1 | GspE/PulE family protein | - |
| GS_RS02175 (GSU0436) | pilT | 467782..468852 (+) | 1071 | WP_010941105.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GS_RS02185 (GSU0437) | - | 469236..470651 (+) | 1416 | WP_010941106.1 | UbiD family decarboxylase | - |
| GS_RS02190 (GSU0438) | - | 470651..471181 (+) | 531 | WP_010941107.1 | lipoprotein | - |
| GS_RS02195 (GSU0439) | - | 471181..472077 (+) | 897 | WP_010941108.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| GS_RS02200 (GSU0440) | - | 472074..472697 (+) | 624 | WP_010941109.1 | UbiX family flavin prenyltransferase | - |
| GS_RS02205 (GSU0441) | mqnE | 472702..473787 (+) | 1086 | WP_010941110.1 | aminofutalosine synthase MqnE | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39670.84 Da Isoelectric Point: 7.2650
>NTDB_id=21049 GS_RS02175 WP_010941105.1 467782..468852(+) (pilT) [Geobacter sulfurreducens PCA]
MARIDALFKLLKEQGASDLHLSSGAPPIFRLHGEMARQNFKVLSHEELTAILYEILTDKQKADFEERRDLDFAYAIPGLA
RFRGNYMMTHRGIAAVFRIIPSKILSADDLSLPDGVRRMTQFKKGLVLVTGPTGSGKSTTLAAMIDLINATRKEHILTLE
DPLEFIHENKMSLLNQRQIGEHSLSFSAALRAALREDPDVILVGEMRDLETIGLAMSAAETGHLVFGTLHTNSAAKTIDR
IIDVFPTDQQEQTRAMLSESLKGVVCQQLLKTADGKGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKRDGMQLMDQ
HLLDLFKTKRITAEEAYRCAQDKKQFEQYLTEKPGQ
MARIDALFKLLKEQGASDLHLSSGAPPIFRLHGEMARQNFKVLSHEELTAILYEILTDKQKADFEERRDLDFAYAIPGLA
RFRGNYMMTHRGIAAVFRIIPSKILSADDLSLPDGVRRMTQFKKGLVLVTGPTGSGKSTTLAAMIDLINATRKEHILTLE
DPLEFIHENKMSLLNQRQIGEHSLSFSAALRAALREDPDVILVGEMRDLETIGLAMSAAETGHLVFGTLHTNSAAKTIDR
IIDVFPTDQQEQTRAMLSESLKGVVCQQLLKTADGKGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKRDGMQLMDQ
HLLDLFKTKRITAEEAYRCAQDKKQFEQYLTEKPGQ
Nucleotide
Download Length: 1071 bp
>NTDB_id=21049 GS_RS02175 WP_010941105.1 467782..468852(+) (pilT) [Geobacter sulfurreducens PCA]
ATGGCACGTATCGACGCACTGTTCAAGCTGCTGAAGGAGCAAGGGGCCTCCGACCTCCACCTGTCGTCCGGGGCTCCGCC
CATTTTCAGGCTTCACGGAGAGATGGCGCGGCAGAACTTCAAGGTTCTTTCCCACGAGGAACTGACGGCCATCCTCTACG
AAATCCTGACCGACAAGCAGAAGGCCGATTTCGAGGAGCGGCGGGACCTGGACTTCGCCTATGCCATTCCCGGCCTGGCC
CGGTTCCGGGGGAACTACATGATGACCCACCGGGGCATCGCCGCGGTCTTCCGGATCATCCCCAGCAAGATCCTCTCGGC
AGACGACCTGAGCCTTCCCGACGGGGTTCGCCGCATGACCCAGTTCAAGAAGGGGCTCGTGCTGGTCACCGGGCCCACGG
GGTCGGGCAAGTCCACCACCCTTGCCGCCATGATCGACCTCATCAACGCCACCCGCAAGGAGCACATCCTCACTCTGGAA
GATCCTCTCGAATTCATCCACGAGAACAAGATGTCGCTCCTGAACCAGCGGCAGATCGGCGAGCACTCCCTGAGTTTTTC
CGCCGCCCTTCGCGCCGCCCTGCGGGAGGACCCCGACGTGATCCTCGTGGGCGAGATGCGGGACCTGGAGACCATAGGCC
TCGCCATGAGCGCAGCCGAGACCGGCCACCTGGTCTTCGGCACCCTCCATACCAACTCGGCGGCCAAGACCATCGACCGG
ATCATCGACGTTTTTCCCACCGATCAGCAGGAGCAGACCCGGGCCATGCTCTCCGAATCTCTCAAAGGGGTCGTCTGCCA
GCAGCTTCTCAAAACCGCCGACGGCAAGGGGCGGGTTGCGGCACTGGAGATCATGCTCGGCACACCGGCCATCGCCAACC
TGATCAGGGAGGGGAAAACCTTCCAGATCCCCTCCATCATCCAGACTGCCAAGCGTGACGGCATGCAGCTCATGGACCAG
CACCTGCTGGACCTCTTCAAGACCAAGCGGATCACCGCCGAAGAGGCCTACCGCTGCGCCCAGGACAAGAAGCAGTTCGA
GCAGTACCTGACGGAAAAGCCGGGCCAGTAG
ATGGCACGTATCGACGCACTGTTCAAGCTGCTGAAGGAGCAAGGGGCCTCCGACCTCCACCTGTCGTCCGGGGCTCCGCC
CATTTTCAGGCTTCACGGAGAGATGGCGCGGCAGAACTTCAAGGTTCTTTCCCACGAGGAACTGACGGCCATCCTCTACG
AAATCCTGACCGACAAGCAGAAGGCCGATTTCGAGGAGCGGCGGGACCTGGACTTCGCCTATGCCATTCCCGGCCTGGCC
CGGTTCCGGGGGAACTACATGATGACCCACCGGGGCATCGCCGCGGTCTTCCGGATCATCCCCAGCAAGATCCTCTCGGC
AGACGACCTGAGCCTTCCCGACGGGGTTCGCCGCATGACCCAGTTCAAGAAGGGGCTCGTGCTGGTCACCGGGCCCACGG
GGTCGGGCAAGTCCACCACCCTTGCCGCCATGATCGACCTCATCAACGCCACCCGCAAGGAGCACATCCTCACTCTGGAA
GATCCTCTCGAATTCATCCACGAGAACAAGATGTCGCTCCTGAACCAGCGGCAGATCGGCGAGCACTCCCTGAGTTTTTC
CGCCGCCCTTCGCGCCGCCCTGCGGGAGGACCCCGACGTGATCCTCGTGGGCGAGATGCGGGACCTGGAGACCATAGGCC
TCGCCATGAGCGCAGCCGAGACCGGCCACCTGGTCTTCGGCACCCTCCATACCAACTCGGCGGCCAAGACCATCGACCGG
ATCATCGACGTTTTTCCCACCGATCAGCAGGAGCAGACCCGGGCCATGCTCTCCGAATCTCTCAAAGGGGTCGTCTGCCA
GCAGCTTCTCAAAACCGCCGACGGCAAGGGGCGGGTTGCGGCACTGGAGATCATGCTCGGCACACCGGCCATCGCCAACC
TGATCAGGGAGGGGAAAACCTTCCAGATCCCCTCCATCATCCAGACTGCCAAGCGTGACGGCATGCAGCTCATGGACCAG
CACCTGCTGGACCTCTTCAAGACCAAGCGGATCACCGCCGAAGAGGCCTACCGCTGCGCCCAGGACAAGAAGCAGTTCGA
GCAGTACCTGACGGAAAAGCCGGGCCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
58.308 |
92.978 |
0.542 |
| pilT | Legionella pneumophila strain Lp02 |
58.308 |
92.978 |
0.542 |
| pilT | Pseudomonas stutzeri DSM 10701 |
56.268 |
96.348 |
0.542 |
| pilT | Pseudomonas aeruginosa PAK |
55.685 |
96.348 |
0.537 |
| pilT | Acinetobacter baylyi ADP1 |
55.394 |
96.348 |
0.534 |
| pilT | Acinetobacter baumannii strain A118 |
54.519 |
96.348 |
0.525 |
| pilT | Acinetobacter nosocomialis M2 |
54.519 |
96.348 |
0.525 |
| pilT | Acinetobacter baumannii D1279779 |
54.519 |
96.348 |
0.525 |
| pilT | Neisseria gonorrhoeae MS11 |
54.678 |
96.067 |
0.525 |
| pilT | Neisseria meningitidis 8013 |
54.678 |
96.067 |
0.525 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.061 |
96.348 |
0.511 |
| pilT | Vibrio cholerae strain A1552 |
53.012 |
93.258 |
0.494 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
53.012 |
93.258 |
0.494 |
| pilU | Vibrio cholerae strain A1552 |
40.294 |
95.506 |
0.385 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.06 |
93.258 |
0.374 |
| pilU | Acinetobacter baylyi ADP1 |
38.806 |
94.101 |
0.365 |