Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | F7310_RS09285 | Genome accession | NZ_CP016796 |
| Coordinates | 2001942..2002970 (-) | Length | 342 a.a. |
| NCBI ID | WP_072713306.1 | Uniprot ID | A0A1L4BUK4 |
| Organism | Francisella uliginis strain TX07-7310 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1996942..2007970
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7310_RS09265 (F7310_09210) | - | 1997034..1998464 (+) | 1431 | WP_072713302.1 | sensor histidine kinase | - |
| F7310_RS09270 (F7310_09215) | - | 1998499..1999380 (-) | 882 | WP_072713303.1 | TIGR01777 family oxidoreductase | - |
| F7310_RS09275 (F7310_09220) | - | 1999593..2000969 (+) | 1377 | WP_072713304.1 | cytochrome ubiquinol oxidase subunit I | - |
| F7310_RS09280 (F7310_09225) | - | 2000973..2001935 (+) | 963 | WP_072713305.1 | cytochrome d ubiquinol oxidase subunit II | - |
| F7310_RS09285 (F7310_09230) | pilT | 2001942..2002970 (-) | 1029 | WP_072713306.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| F7310_RS09290 (F7310_09235) | acnA | 2003063..2005861 (-) | 2799 | WP_072713307.1 | aconitate hydratase AcnA | - |
| F7310_RS09295 (F7310_09240) | - | 2006129..2006695 (+) | 567 | WP_072713308.1 | Nif11-like leader peptide family natural product precursor | - |
| F7310_RS09300 (F7310_09245) | - | 2006721..2007161 (-) | 441 | WP_072713309.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 342 a.a. Molecular weight: 38094.90 Da Isoelectric Point: 7.0989
>NTDB_id=192311 F7310_RS09285 WP_072713306.1 2001942..2002970(-) (pilT) [Francisella uliginis strain TX07-7310]
MIRKLLTICVQKKASDLHLSSGCRAKYRIDGDLIDIESAPVLNDKMISQMLLEIMTDDQKEELVDTYECDFSIDDKENDA
RFRVNAFFHNRGYGAVFRRLENKIPTLDQFGAPRILKEVQAKKGGLILVTGPTGSGKSSTLAALVNEINQKEDSHILTIE
DPVEFVHVSQRALVNQREVKRDTKSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVASYEVLISNSGIRNMIKENKLSQIYTALQTGTSKGMSTMEHS
IENLLKAGTITPEEAAKYIVVR
MIRKLLTICVQKKASDLHLSSGCRAKYRIDGDLIDIESAPVLNDKMISQMLLEIMTDDQKEELVDTYECDFSIDDKENDA
RFRVNAFFHNRGYGAVFRRLENKIPTLDQFGAPRILKEVQAKKGGLILVTGPTGSGKSSTLAALVNEINQKEDSHILTIE
DPVEFVHVSQRALVNQREVKRDTKSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVASYEVLISNSGIRNMIKENKLSQIYTALQTGTSKGMSTMEHS
IENLLKAGTITPEEAAKYIVVR
Nucleotide
Download Length: 1029 bp
>NTDB_id=192311 F7310_RS09285 WP_072713306.1 2001942..2002970(-) (pilT) [Francisella uliginis strain TX07-7310]
ATGATAAGAAAACTACTAACTATTTGTGTGCAAAAGAAAGCATCGGACTTACATTTATCTTCTGGCTGCAGGGCTAAATA
TAGAATAGATGGTGATTTGATTGATATAGAATCAGCTCCAGTTTTGAATGATAAAATGATTTCTCAAATGCTTTTAGAAA
TAATGACAGATGATCAAAAAGAAGAGTTAGTCGACACTTATGAGTGTGATTTTTCTATTGATGATAAAGAAAATGATGCC
AGATTTAGGGTTAATGCATTTTTTCACAATAGAGGATATGGAGCAGTCTTTCGTCGCTTAGAAAATAAAATTCCAACACT
TGATCAATTTGGAGCTCCTAGGATTCTTAAGGAAGTGCAAGCTAAAAAAGGTGGTTTAATACTTGTAACAGGTCCTACTG
GTTCAGGTAAAAGTAGTACTTTAGCCGCATTAGTTAATGAGATAAATCAAAAAGAGGACTCTCATATTTTAACTATTGAG
GATCCAGTTGAATTTGTTCATGTTAGCCAAAGAGCATTAGTAAATCAACGTGAAGTAAAAAGAGATACTAAGAGTTTCAA
TGCAGCATTAAAATCAGCACTTAGAGAAGATCCGGATTGTATTCTTGTTGGTGAGATGAGAGATTTAGAGACTATTCGTT
TAGCATTAGAAGCAGCTGAGACGGGACATTTGGTTTTAGGTACTTTACATACAATGTCAGCTATTAAAACAGTTGATAGG
GTTATCTCGGTATTTCCTCCAGCTGAGCAAGAGTTAGTGCGTAATATGTTAGCTGAATCTTTACAGATTGTTATTTCTCA
AAGACTACTTAAGCGTAAGGGTGGAGGACGAGTAGCTAGTTATGAAGTGCTTATCTCTAACTCAGGTATTAGAAATATGA
TAAAAGAGAATAAGCTTTCTCAGATATATACAGCATTACAGACTGGTACTTCAAAAGGTATGTCAACAATGGAGCATAGT
ATAGAGAATCTACTTAAAGCTGGAACTATAACACCAGAAGAAGCAGCTAAGTATATAGTTGTTAGATAA
ATGATAAGAAAACTACTAACTATTTGTGTGCAAAAGAAAGCATCGGACTTACATTTATCTTCTGGCTGCAGGGCTAAATA
TAGAATAGATGGTGATTTGATTGATATAGAATCAGCTCCAGTTTTGAATGATAAAATGATTTCTCAAATGCTTTTAGAAA
TAATGACAGATGATCAAAAAGAAGAGTTAGTCGACACTTATGAGTGTGATTTTTCTATTGATGATAAAGAAAATGATGCC
AGATTTAGGGTTAATGCATTTTTTCACAATAGAGGATATGGAGCAGTCTTTCGTCGCTTAGAAAATAAAATTCCAACACT
TGATCAATTTGGAGCTCCTAGGATTCTTAAGGAAGTGCAAGCTAAAAAAGGTGGTTTAATACTTGTAACAGGTCCTACTG
GTTCAGGTAAAAGTAGTACTTTAGCCGCATTAGTTAATGAGATAAATCAAAAAGAGGACTCTCATATTTTAACTATTGAG
GATCCAGTTGAATTTGTTCATGTTAGCCAAAGAGCATTAGTAAATCAACGTGAAGTAAAAAGAGATACTAAGAGTTTCAA
TGCAGCATTAAAATCAGCACTTAGAGAAGATCCGGATTGTATTCTTGTTGGTGAGATGAGAGATTTAGAGACTATTCGTT
TAGCATTAGAAGCAGCTGAGACGGGACATTTGGTTTTAGGTACTTTACATACAATGTCAGCTATTAAAACAGTTGATAGG
GTTATCTCGGTATTTCCTCCAGCTGAGCAAGAGTTAGTGCGTAATATGTTAGCTGAATCTTTACAGATTGTTATTTCTCA
AAGACTACTTAAGCGTAAGGGTGGAGGACGAGTAGCTAGTTATGAAGTGCTTATCTCTAACTCAGGTATTAGAAATATGA
TAAAAGAGAATAAGCTTTCTCAGATATATACAGCATTACAGACTGGTACTTCAAAAGGTATGTCAACAATGGAGCATAGT
ATAGAGAATCTACTTAAAGCTGGAACTATAACACCAGAAGAAGCAGCTAAGTATATAGTTGTTAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii D1279779 |
55.689 |
97.661 |
0.544 |
| pilT | Acinetobacter baumannii strain A118 |
55.689 |
97.661 |
0.544 |
| pilT | Acinetobacter nosocomialis M2 |
55.689 |
97.661 |
0.544 |
| pilT | Pseudomonas aeruginosa PAK |
54.79 |
97.661 |
0.535 |
| pilT | Pseudomonas stutzeri DSM 10701 |
54.192 |
97.661 |
0.529 |
| pilT | Legionella pneumophila strain Lp02 |
53.55 |
98.83 |
0.529 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.55 |
98.83 |
0.529 |
| pilT | Neisseria gonorrhoeae MS11 |
53.412 |
98.538 |
0.526 |
| pilT | Neisseria meningitidis 8013 |
53.412 |
98.538 |
0.526 |
| pilT | Vibrio cholerae strain A1552 |
52.959 |
98.83 |
0.523 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
52.959 |
98.83 |
0.523 |
| pilT | Acinetobacter baylyi ADP1 |
54.407 |
96.199 |
0.523 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.844 |
97.368 |
0.427 |
| pilU | Acinetobacter baylyi ADP1 |
38.507 |
97.953 |
0.377 |
| pilU | Pseudomonas stutzeri DSM 10701 |
37.838 |
97.368 |
0.368 |
| pilU | Vibrio cholerae strain A1552 |
38.889 |
94.737 |
0.368 |