Detailed information
Overview
| Name | comFC/cflB | Type | Machinery gene |
| Locus tag | BSR19_RS01895 | Genome accession | NZ_CP018187 |
| Coordinates | 359101..359763 (+) | Length | 220 a.a. |
| NCBI ID | WP_156246370.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain ICDC2 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 354101..364763
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSR19_RS01870 (BSR19_01870) | - | 354440..355150 (+) | 711 | WP_002883761.1 | ABC transporter ATP-binding protein | - |
| BSR19_RS01875 (BSR19_01875) | - | 355285..355944 (+) | 660 | WP_037600377.1 | CBS and ACT domain-containing protein | - |
| BSR19_RS01880 (BSR19_01880) | cysK | 356092..357018 (-) | 927 | WP_002883742.1 | cysteine synthase A | - |
| BSR19_RS01885 (BSR19_01885) | - | 357120..357746 (-) | 627 | WP_060973192.1 | YigZ family protein | - |
| BSR19_RS01890 (BSR19_01890) | comFA/cflA | 357801..359120 (+) | 1320 | WP_156246369.1 | DEAD/DEAH box helicase | Machinery gene |
| BSR19_RS01895 (BSR19_01895) | comFC/cflB | 359101..359763 (+) | 663 | WP_156246370.1 | ComF family protein | Machinery gene |
| BSR19_RS01900 (BSR19_01900) | hpf | 359842..360390 (+) | 549 | WP_002883786.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 26121.42 Da Isoelectric Point: 8.5995
>NTDB_id=173596 BSR19_RS01895 WP_156246370.1 359101..359763(+) (comFC/cflB) [Streptococcus salivarius strain ICDC2]
MKCLLCNDWIESLPKLRDLIMFNQRKEYSCRSCKHQFKNLSKERCQNCNKELYGDACIDCKLWMKKGYIPKHLAIYRYEE
NMKEYFSRYKFMGDYCLRKIFQQDIKNNLKPFLKKGYTIVPVPLSEERLAERGFNQVEGLIEGIPYRDIFEKRDIEKQSS
KTREERLSQDNAFCLKEGINLPDKIIIVDDIYTTGSTLYQMVQLLEGIGIKEVLTFSLAR
MKCLLCNDWIESLPKLRDLIMFNQRKEYSCRSCKHQFKNLSKERCQNCNKELYGDACIDCKLWMKKGYIPKHLAIYRYEE
NMKEYFSRYKFMGDYCLRKIFQQDIKNNLKPFLKKGYTIVPVPLSEERLAERGFNQVEGLIEGIPYRDIFEKRDIEKQSS
KTREERLSQDNAFCLKEGINLPDKIIIVDDIYTTGSTLYQMVQLLEGIGIKEVLTFSLAR
Nucleotide
Download Length: 663 bp
>NTDB_id=173596 BSR19_RS01895 WP_156246370.1 359101..359763(+) (comFC/cflB) [Streptococcus salivarius strain ICDC2]
ATGAAGTGTCTGCTATGTAATGATTGGATTGAATCACTACCAAAATTAAGAGACCTTATTATGTTTAACCAAAGAAAAGA
GTACTCTTGCCGATCTTGTAAACATCAGTTTAAAAACCTCTCAAAAGAAAGATGTCAAAATTGTAATAAAGAGTTATATG
GAGATGCTTGTATTGATTGTAAACTTTGGATGAAAAAAGGCTATATTCCTAAGCACCTTGCTATTTATCGATATGAGGAA
AATATGAAAGAGTATTTTAGTCGCTATAAATTTATGGGAGACTATTGTCTTAGAAAAATATTTCAACAAGATATTAAAAA
CAACTTAAAACCATTTTTGAAGAAAGGTTATACCATAGTGCCAGTCCCATTATCGGAAGAACGCTTGGCAGAAAGAGGAT
TCAACCAAGTTGAGGGATTGATAGAGGGAATTCCCTATCGGGATATCTTTGAGAAAAGAGATATTGAGAAGCAATCCTCA
AAAACACGCGAGGAGCGTCTAAGTCAAGATAATGCTTTCTGTCTCAAGGAAGGTATAAATCTACCAGATAAGATTATTAT
AGTGGATGATATCTATACAACGGGTTCCACTTTATATCAGATGGTTCAACTGTTAGAAGGTATAGGTATTAAAGAAGTTT
TGACCTTTTCACTAGCTAGATAA
ATGAAGTGTCTGCTATGTAATGATTGGATTGAATCACTACCAAAATTAAGAGACCTTATTATGTTTAACCAAAGAAAAGA
GTACTCTTGCCGATCTTGTAAACATCAGTTTAAAAACCTCTCAAAAGAAAGATGTCAAAATTGTAATAAAGAGTTATATG
GAGATGCTTGTATTGATTGTAAACTTTGGATGAAAAAAGGCTATATTCCTAAGCACCTTGCTATTTATCGATATGAGGAA
AATATGAAAGAGTATTTTAGTCGCTATAAATTTATGGGAGACTATTGTCTTAGAAAAATATTTCAACAAGATATTAAAAA
CAACTTAAAACCATTTTTGAAGAAAGGTTATACCATAGTGCCAGTCCCATTATCGGAAGAACGCTTGGCAGAAAGAGGAT
TCAACCAAGTTGAGGGATTGATAGAGGGAATTCCCTATCGGGATATCTTTGAGAAAAGAGATATTGAGAAGCAATCCTCA
AAAACACGCGAGGAGCGTCTAAGTCAAGATAATGCTTTCTGTCTCAAGGAAGGTATAAATCTACCAGATAAGATTATTAT
AGTGGATGATATCTATACAACGGGTTCCACTTTATATCAGATGGTTCAACTGTTAGAAGGTATAGGTATTAAAGAAGTTT
TGACCTTTTCACTAGCTAGATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC/cflB | Streptococcus mitis NCTC 12261 |
44.595 |
100 |
0.45 |
| comFC/cflB | Streptococcus pneumoniae Rx1 |
44.144 |
100 |
0.445 |
| comFC/cflB | Streptococcus pneumoniae D39 |
44.144 |
100 |
0.445 |
| comFC/cflB | Streptococcus pneumoniae R6 |
44.144 |
100 |
0.445 |
| comFC/cflB | Streptococcus pneumoniae TIGR4 |
44.144 |
100 |
0.445 |
| comFC/cflB | Streptococcus mitis SK321 |
43.694 |
100 |
0.441 |