Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | AKJ09_RS48100 | Genome accession | NZ_CP012333 |
| Coordinates | 11175556..11176671 (-) | Length | 371 a.a. |
| NCBI ID | WP_146654592.1 | Uniprot ID | A0A0K1QDP7 |
| Organism | Labilithrix luteola strain DSM 27648 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 11170556..11181671
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AKJ09_RS48085 (AKJ09_10561) | - | 11170738..11171376 (+) | 639 | WP_146654589.1 | hypothetical protein | - |
| AKJ09_RS48090 (AKJ09_10562) | - | 11171513..11172673 (+) | 1161 | WP_146654590.1 | hypothetical protein | - |
| AKJ09_RS48095 (AKJ09_10563) | - | 11172855..11175404 (+) | 2550 | WP_169928548.1 | MXAN_6577-like cysteine-rich protein | - |
| AKJ09_RS48100 (AKJ09_10564) | pilT | 11175556..11176671 (-) | 1116 | WP_146654592.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| AKJ09_RS48105 (AKJ09_10566) | pilB | 11176973..11178679 (-) | 1707 | WP_146654593.1 | type IV-A pilus assembly ATPase PilB | - |
| AKJ09_RS48110 (AKJ09_10567) | - | 11178843..11180048 (+) | 1206 | WP_146654594.1 | FHA domain-containing protein | - |
| AKJ09_RS48115 (AKJ09_10568) | - | 11180143..11181558 (+) | 1416 | WP_146654595.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 41177.88 Da Isoelectric Point: 7.5404
>NTDB_id=153574 AKJ09_RS48100 WP_146654592.1 11175556..11176671(-) (pilT) [Labilithrix luteola strain DSM 27648]
MTQAGELKVNLHQLLKAMVEKGASDMHITAGAPPLLRIDGEVIPLKLPPLTPVDTKQLCYSIMTEEQKISFEKDSELDLS
FGVKNLSRFRANIYLQRTTIAGAIRTIPFKILSFDELGLPTVISDIANKPNGLVLVTGPTGSGKSTTLASIIDKINSEQR
MHILTIEDPIEYLHPHKMCVVNQREVGSDTASFKGALRYVLRQDPDVVLVGEMRDLDTIEAALTIAETGHLVFATLHTNS
AVSTINRIIDVFPPHQQDQIRNKLSFVLQGVITQQLLPRAGAPGRCLAMEILVPNPAIRNLIRENKVHQIYGQMQVGQDK
FGMLTLNQSLLNLYMRRFITLEQALNQSIEVEELKNMIEARAKAGHPMPGR
MTQAGELKVNLHQLLKAMVEKGASDMHITAGAPPLLRIDGEVIPLKLPPLTPVDTKQLCYSIMTEEQKISFEKDSELDLS
FGVKNLSRFRANIYLQRTTIAGAIRTIPFKILSFDELGLPTVISDIANKPNGLVLVTGPTGSGKSTTLASIIDKINSEQR
MHILTIEDPIEYLHPHKMCVVNQREVGSDTASFKGALRYVLRQDPDVVLVGEMRDLDTIEAALTIAETGHLVFATLHTNS
AVSTINRIIDVFPPHQQDQIRNKLSFVLQGVITQQLLPRAGAPGRCLAMEILVPNPAIRNLIRENKVHQIYGQMQVGQDK
FGMLTLNQSLLNLYMRRFITLEQALNQSIEVEELKNMIEARAKAGHPMPGR
Nucleotide
Download Length: 1116 bp
>NTDB_id=153574 AKJ09_RS48100 WP_146654592.1 11175556..11176671(-) (pilT) [Labilithrix luteola strain DSM 27648]
ATGACCCAGGCTGGCGAACTCAAGGTCAATCTCCACCAGCTCCTCAAGGCGATGGTCGAGAAGGGCGCGAGCGACATGCA
CATCACGGCAGGCGCGCCGCCGCTCCTGCGCATCGACGGCGAGGTCATTCCGCTCAAGCTGCCGCCGCTCACCCCGGTCG
ACACGAAGCAGCTCTGCTACTCGATCATGACCGAGGAGCAGAAGATCTCGTTCGAAAAGGACAGCGAGCTCGACCTCTCG
TTCGGCGTGAAGAACCTCTCGCGTTTCCGCGCCAACATCTACCTGCAGCGCACCACGATCGCCGGCGCGATTCGAACGAT
TCCCTTCAAGATCCTCTCGTTCGACGAGCTCGGTCTGCCGACCGTCATCTCGGACATCGCGAACAAGCCGAACGGCCTCG
TCCTCGTCACCGGACCCACCGGTTCGGGCAAGAGCACCACGCTCGCGTCGATCATCGACAAGATCAACAGCGAGCAGCGG
ATGCACATCCTTACGATCGAAGACCCGATCGAGTACTTGCACCCGCACAAGATGTGCGTCGTGAATCAGCGCGAAGTCGG
CTCGGACACCGCGTCGTTCAAGGGCGCGCTCCGTTACGTTCTTCGCCAGGACCCCGACGTCGTGCTCGTCGGCGAAATGC
GCGACCTCGACACCATCGAGGCCGCGCTGACCATCGCCGAAACCGGTCACTTGGTCTTCGCCACGCTCCACACGAACAGC
GCGGTGTCGACGATCAACCGTATCATCGACGTCTTCCCGCCCCACCAGCAGGACCAGATCCGCAACAAGCTGTCGTTCGT
TCTCCAGGGCGTCATCACCCAGCAGCTCTTGCCGCGCGCCGGTGCGCCGGGCCGCTGCCTCGCCATGGAGATCCTGGTGC
CGAACCCCGCCATCCGGAACCTGATTCGCGAGAACAAGGTCCATCAGATCTACGGTCAGATGCAGGTCGGCCAGGACAAG
TTCGGCATGCTCACGCTGAACCAGTCGCTCCTGAACCTCTACATGCGCCGCTTCATCACGCTCGAGCAGGCGCTCAATCA
GTCGATCGAAGTCGAAGAGTTGAAGAACATGATCGAGGCCCGCGCGAAGGCGGGGCATCCGATGCCCGGGCGCTGA
ATGACCCAGGCTGGCGAACTCAAGGTCAATCTCCACCAGCTCCTCAAGGCGATGGTCGAGAAGGGCGCGAGCGACATGCA
CATCACGGCAGGCGCGCCGCCGCTCCTGCGCATCGACGGCGAGGTCATTCCGCTCAAGCTGCCGCCGCTCACCCCGGTCG
ACACGAAGCAGCTCTGCTACTCGATCATGACCGAGGAGCAGAAGATCTCGTTCGAAAAGGACAGCGAGCTCGACCTCTCG
TTCGGCGTGAAGAACCTCTCGCGTTTCCGCGCCAACATCTACCTGCAGCGCACCACGATCGCCGGCGCGATTCGAACGAT
TCCCTTCAAGATCCTCTCGTTCGACGAGCTCGGTCTGCCGACCGTCATCTCGGACATCGCGAACAAGCCGAACGGCCTCG
TCCTCGTCACCGGACCCACCGGTTCGGGCAAGAGCACCACGCTCGCGTCGATCATCGACAAGATCAACAGCGAGCAGCGG
ATGCACATCCTTACGATCGAAGACCCGATCGAGTACTTGCACCCGCACAAGATGTGCGTCGTGAATCAGCGCGAAGTCGG
CTCGGACACCGCGTCGTTCAAGGGCGCGCTCCGTTACGTTCTTCGCCAGGACCCCGACGTCGTGCTCGTCGGCGAAATGC
GCGACCTCGACACCATCGAGGCCGCGCTGACCATCGCCGAAACCGGTCACTTGGTCTTCGCCACGCTCCACACGAACAGC
GCGGTGTCGACGATCAACCGTATCATCGACGTCTTCCCGCCCCACCAGCAGGACCAGATCCGCAACAAGCTGTCGTTCGT
TCTCCAGGGCGTCATCACCCAGCAGCTCTTGCCGCGCGCCGGTGCGCCGGGCCGCTGCCTCGCCATGGAGATCCTGGTGC
CGAACCCCGCCATCCGGAACCTGATTCGCGAGAACAAGGTCCATCAGATCTACGGTCAGATGCAGGTCGGCCAGGACAAG
TTCGGCATGCTCACGCTGAACCAGTCGCTCCTGAACCTCTACATGCGCCGCTTCATCACGCTCGAGCAGGCGCTCAATCA
GTCGATCGAAGTCGAAGAGTTGAAGAACATGATCGAGGCCCGCGCGAAGGCGGGGCATCCGATGCCCGGGCGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.722 |
94.07 |
0.496 |
| pilT | Legionella pneumophila strain Lp02 |
51.884 |
92.992 |
0.482 |
| pilT | Legionella pneumophila strain ERS1305867 |
51.884 |
92.992 |
0.482 |
| pilT | Acinetobacter baumannii D1279779 |
52.679 |
90.566 |
0.477 |
| pilT | Acinetobacter baumannii strain A118 |
52.679 |
90.566 |
0.477 |
| pilT | Acinetobacter nosocomialis M2 |
52.679 |
90.566 |
0.477 |
| pilT | Acinetobacter baylyi ADP1 |
52.381 |
90.566 |
0.474 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.709 |
92.722 |
0.461 |
| pilT | Vibrio cholerae strain A1552 |
49.709 |
92.722 |
0.461 |
| pilT | Pseudomonas aeruginosa PAK |
50 |
91.644 |
0.458 |
| pilT | Pseudomonas stutzeri DSM 10701 |
48.555 |
93.261 |
0.453 |
| pilT | Neisseria meningitidis 8013 |
46.628 |
91.914 |
0.429 |
| pilT | Neisseria gonorrhoeae MS11 |
46.199 |
92.183 |
0.426 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.741 |
94.609 |
0.385 |
| pilU | Vibrio cholerae strain A1552 |
40.51 |
95.148 |
0.385 |
| pilU | Acinetobacter baylyi ADP1 |
39.011 |
98.113 |
0.383 |