Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ABA1_RS04645 | Genome accession | NZ_CP010781 |
| Coordinates | 965596..966633 (-) | Length | 345 a.a. |
| NCBI ID | WP_000355491.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain A1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 960596..971633
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABA1_RS04615 (ABA1_00912) | - | 961380..961835 (+) | 456 | WP_000782976.1 | bacteriohemerythrin | - |
| ABA1_RS04620 (ABA1_00913) | - | 961988..963055 (+) | 1068 | WP_000092403.1 | hypothetical protein | - |
| ABA1_RS04625 (ABA1_00914) | - | 963055..963378 (+) | 324 | WP_000442585.1 | RnfH family protein | - |
| ABA1_RS04630 (ABA1_00915) | - | 963433..963831 (-) | 399 | WP_001170994.1 | outer membrane protein assembly factor BamE | - |
| ABA1_RS04635 (ABA1_00916) | fur | 963943..964380 (+) | 438 | WP_001122847.1 | ferric iron uptake transcriptional regulator | - |
| ABA1_RS04640 (ABA1_00917) | pilU | 964450..965568 (-) | 1119 | WP_000347036.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ABA1_RS04645 (ABA1_00918) | pilT | 965596..966633 (-) | 1038 | WP_000355491.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ABA1_RS04650 (ABA1_00919) | - | 966760..967452 (+) | 693 | WP_001108506.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ABA1_RS04655 (ABA1_00920) | - | 967654..971250 (-) | 3597 | WP_000698791.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38254.88 Da Isoelectric Point: 6.8886
>NTDB_id=139729 ABA1_RS04645 WP_000355491.1 965596..966633(-) (pilT) [Acinetobacter baumannii strain A1]
MDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRLVYDIMNDKQRRDYEEKLETDFSFEVPNVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGQIFKDICGYPRGIVLVTGPTGSGKSTTLAAMLDYINENRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANHGMTTLDQSL
KGLVARGVISPQTARTAAKQPESFL
MDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRLVYDIMNDKQRRDYEEKLETDFSFEVPNVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGQIFKDICGYPRGIVLVTGPTGSGKSTTLAAMLDYINENRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANHGMTTLDQSL
KGLVARGVISPQTARTAAKQPESFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=139729 ABA1_RS04645 WP_000355491.1 965596..966633(-) (pilT) [Acinetobacter baumannii strain A1]
ATGGATATTACAGAGCTACTCGCCTTCTCTGTGAAAAATGGCGCGTCCGATTTACATCTCTCTGCTGGCATGCCACCAAT
GATTCGTGTTGACGGTGAAGTTCGTCGTATTAACTTACCAGCTCTAGAACATAAAGATGTCCACCGTCTTGTTTACGACA
TCATGAATGATAAACAGCGCCGTGACTATGAAGAAAAACTCGAAACTGACTTTTCTTTTGAAGTACCTAACGTTGCGCGT
TTCCGTGTTAACGCATTTAACCAAAACCGTGGTGCTGGTGCAGTCTTTCGTACCATTCCATCTAAAGTCCTCACCATGGA
AGATCTAGGTTTAGGGCAAATCTTTAAAGATATTTGCGGCTATCCTCGCGGCATTGTACTGGTGACGGGACCAACAGGTT
CGGGTAAATCAACTACGCTTGCAGCGATGCTCGATTATATTAACGAAAACCGCTATGACCATATTTTAACGGTGGAAGAT
CCAATCGAATTTGTACACCAGTCTAAGAAATGTCTCATTAACCAGCGTGAAGTGCATCGTGACACACACGGCTTTAATGA
AGCCCTTCGCTCAGCACTGCGTGAAGACCCTGATATTATTTTGGTCGGTGAGATGCGTGACCTTGAAACCATTCGCTTGG
CATTAACCGCTGCCGAAACAGGTCACTTGGTGTTTGGTACACTCCACACCACGTCAGCTGCAAAAACTATTGACCGTGTG
ATTGACGTATTCCCTGCCGAAGAAAAAGACATGGTTCGTGCCATGCTGTCAGAATCTTTACAAGCGGTTATTTCACAAAC
CCTGCTTAAAAAGAATGGTGGTGGCCGTGTCGCAGCGCATGAGATCATGATTGGTATTCCGGCTATTCGTAACTTAATTC
GTGAAAACAAAGTCGCGCAAATGTACTCAGCCATTCAAACTGGTGCCAATCATGGCATGACCACACTCGACCAAAGTTTA
AAAGGCTTAGTCGCTCGCGGTGTAATTAGCCCGCAAACGGCTCGTACTGCAGCAAAACAGCCTGAATCATTCTTATAA
ATGGATATTACAGAGCTACTCGCCTTCTCTGTGAAAAATGGCGCGTCCGATTTACATCTCTCTGCTGGCATGCCACCAAT
GATTCGTGTTGACGGTGAAGTTCGTCGTATTAACTTACCAGCTCTAGAACATAAAGATGTCCACCGTCTTGTTTACGACA
TCATGAATGATAAACAGCGCCGTGACTATGAAGAAAAACTCGAAACTGACTTTTCTTTTGAAGTACCTAACGTTGCGCGT
TTCCGTGTTAACGCATTTAACCAAAACCGTGGTGCTGGTGCAGTCTTTCGTACCATTCCATCTAAAGTCCTCACCATGGA
AGATCTAGGTTTAGGGCAAATCTTTAAAGATATTTGCGGCTATCCTCGCGGCATTGTACTGGTGACGGGACCAACAGGTT
CGGGTAAATCAACTACGCTTGCAGCGATGCTCGATTATATTAACGAAAACCGCTATGACCATATTTTAACGGTGGAAGAT
CCAATCGAATTTGTACACCAGTCTAAGAAATGTCTCATTAACCAGCGTGAAGTGCATCGTGACACACACGGCTTTAATGA
AGCCCTTCGCTCAGCACTGCGTGAAGACCCTGATATTATTTTGGTCGGTGAGATGCGTGACCTTGAAACCATTCGCTTGG
CATTAACCGCTGCCGAAACAGGTCACTTGGTGTTTGGTACACTCCACACCACGTCAGCTGCAAAAACTATTGACCGTGTG
ATTGACGTATTCCCTGCCGAAGAAAAAGACATGGTTCGTGCCATGCTGTCAGAATCTTTACAAGCGGTTATTTCACAAAC
CCTGCTTAAAAAGAATGGTGGTGGCCGTGTCGCAGCGCATGAGATCATGATTGGTATTCCGGCTATTCGTAACTTAATTC
GTGAAAACAAAGTCGCGCAAATGTACTCAGCCATTCAAACTGGTGCCAATCATGGCATGACCACACTCGACCAAAGTTTA
AAAGGCTTAGTCGCTCGCGGTGTAATTAGCCCGCAAACGGCTCGTACTGCAGCAAAACAGCCTGAATCATTCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii strain A118 |
99.71 |
100 |
0.997 |
| pilT | Acinetobacter baumannii D1279779 |
99.71 |
100 |
0.997 |
| pilT | Acinetobacter nosocomialis M2 |
99.42 |
100 |
0.994 |
| pilT | Acinetobacter baylyi ADP1 |
88.663 |
99.71 |
0.884 |
| pilT | Pseudomonas aeruginosa PAK |
84.012 |
99.71 |
0.838 |
| pilT | Pseudomonas stutzeri DSM 10701 |
83.721 |
99.71 |
0.835 |
| pilT | Legionella pneumophila strain Lp02 |
75.581 |
99.71 |
0.754 |
| pilT | Legionella pneumophila strain ERS1305867 |
75.581 |
99.71 |
0.754 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
71.726 |
97.391 |
0.699 |
| pilT | Vibrio cholerae strain A1552 |
71.726 |
97.391 |
0.699 |
| pilT | Neisseria meningitidis 8013 |
68.116 |
100 |
0.681 |
| pilT | Neisseria gonorrhoeae MS11 |
67.826 |
100 |
0.678 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.174 |
100 |
0.522 |
| pilU | Vibrio cholerae strain A1552 |
41.593 |
98.261 |
0.409 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.597 |
97.101 |
0.394 |
| pilU | Acinetobacter baylyi ADP1 |
38.728 |
100 |
0.388 |